KEGG   Pimephales promelas (fathead minnow): 120481376
Entry
120481376         CDS       T08155                                 
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1
  KO
K06063  SNW domain-containing protein 1
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03040  Spliceosome
pprm04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120481376 (snw1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    120481376 (snw1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pprm03041]
    120481376 (snw1)
Spliceosome [BR:pprm03041]
 Complex B
  Other components
   Prp19-related factors
    120481376 (snw1)
 Complex C
    120481376 (snw1)
SSDB
Motif
Pfam: SKIP_SNW
Other DBs
NCBI-GeneID: 120481376
NCBI-ProteinID: XP_039530952
LinkDB
Position
Unknown
AA seq 536 aa
MSLASFLPAPTQLSQDQLEAEERSRVQRSQSTALVSTRREPPPYGSRKSWVPRSLEDFGD
GGAFPEVHVAQYPLEMGRKKRTSNALAVQVDAEGKIKYDAIARQGQNKDKVVFSKYTDML
PKEVLNEDHPELQKPDEEAVKEITEKTRAALNKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGLAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAKMARDRRAGIKAHSDKGGEETEVRERDEIRHE
RRRERQHDRNISRAAPDKRSKLQRDQDRDISELIALGQPNPRTSSEAQYDQRLFNQSKGM
DSGFAGGEDEMYNVYDQPFRSGRDMAQNIYRPGKNADKDVYGDDLDTLMQSNRFVPDREF
SGADHGPRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRASTSGRSKDYDHEKKRRKE
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgtcgctagcaagttttctccctgcacccacccaactgtcccaggaccagttagaggcg
gaggagaggtctcgtgttcagaggtcacaatccactgctttggtctccactcgcagagaa
cctcctccctacggctccaggaaatcatgggtgccccggtcactagaggattttggagat
ggaggagcttttccagaggtccacgtggcccagtatcctctggaaatgggtaggaagaaa
aggacgtccaatgctctggcagtgcaggtggatgcagagggcaagatcaaatatgacgcc
attgctaggcaaggtcaaaacaaagacaaggtcgtgttcagcaaatacacagacatgctt
cctaaggaagtacttaatgaagatcatcctgagctgcagaaaccagatgaagaggcggtg
aaagagattacagaaaagacccgagcagctctgaataaacaggtctcgcagaaaattgca
gcggccatgcctgtacgtgctgcagacaaacaggccccagcacagtatattcggtacaca
ccctcccagcaaggactcgcgtttaactctggagcgaaacagagggtcatccgtatggtg
gaaatgcagaaagatccaatggaaccaccgcgattcaaaatcaataagaaaattcctcgt
ggacctccatcccctcctgctccagtcatgcactctccaagcagaaagatgactgtgaaa
gaacagcaagagtggaagattccaccctgtatttccaactggaagaacgcaaagggttac
accattcctctggacaagcgtttggctgctgacggacgaggcctgcagaccgtccacatc
aatgagaactttgccaagctggcggaggctttgtacattgcagacagaaaggccagagag
gctgtggagatgagagctcaagtggaaaagaagatggcccagaaagaaaaagaaaagaaa
gaagagaagctgagagagttggctaagatggccagagacaggagagctggaatcaaagcc
cacagtgacaaaggtggtgaagagacagaagtcagggagcgtgatgagatccgtcacgag
aggaggagagaaaggcagcacgacaggaacatctccagagccgcccctgataagaggtcg
aagctacaaagagatcaggacagggacatcagtgagctcattgccctgggacaaccgaac
ccccgtacctccagtgaggctcagtatgaccagcgactcttcaatcagagcaaggggatg
gacagtggttttgccggtggcgaggatgagatgtataatgtgtatgatcagcccttcaga
agtggccgagacatggcacagaatatctacaggcctgggaagaatgcagataaggacgtg
tatggagacgacctggacacactcatgcagagcaacaggtttgttcctgatcgggagttc
tcgggtgcggaccatggcccccgccgcgacggcccggtgcagttcgaggaggatcctttc
ggtctggataagttcttggaggaagccaagcagcacggaggctccaagagggcgtccact
agtggccgctcaaaggactacgaccacgagaagaaacgcaggaaggagtga

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