Pimephales promelas (fathead minnow): 120481376
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Entry
120481376 CDS
T08155
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
pprm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120481376 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120481376 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120481376 (snw1)
Spliceosome [BR:
pprm03041
]
Complex B
Other components
Prp19-related factors
120481376 (snw1)
Complex C
120481376 (snw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
120481376
NCBI-ProteinID:
XP_039530952
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MSLASFLPAPTQLSQDQLEAEERSRVQRSQSTALVSTRREPPPYGSRKSWVPRSLEDFGD
GGAFPEVHVAQYPLEMGRKKRTSNALAVQVDAEGKIKYDAIARQGQNKDKVVFSKYTDML
PKEVLNEDHPELQKPDEEAVKEITEKTRAALNKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGLAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAKMARDRRAGIKAHSDKGGEETEVRERDEIRHE
RRRERQHDRNISRAAPDKRSKLQRDQDRDISELIALGQPNPRTSSEAQYDQRLFNQSKGM
DSGFAGGEDEMYNVYDQPFRSGRDMAQNIYRPGKNADKDVYGDDLDTLMQSNRFVPDREF
SGADHGPRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRASTSGRSKDYDHEKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctagcaagttttctccctgcacccacccaactgtcccaggaccagttagaggcg
gaggagaggtctcgtgttcagaggtcacaatccactgctttggtctccactcgcagagaa
cctcctccctacggctccaggaaatcatgggtgccccggtcactagaggattttggagat
ggaggagcttttccagaggtccacgtggcccagtatcctctggaaatgggtaggaagaaa
aggacgtccaatgctctggcagtgcaggtggatgcagagggcaagatcaaatatgacgcc
attgctaggcaaggtcaaaacaaagacaaggtcgtgttcagcaaatacacagacatgctt
cctaaggaagtacttaatgaagatcatcctgagctgcagaaaccagatgaagaggcggtg
aaagagattacagaaaagacccgagcagctctgaataaacaggtctcgcagaaaattgca
gcggccatgcctgtacgtgctgcagacaaacaggccccagcacagtatattcggtacaca
ccctcccagcaaggactcgcgtttaactctggagcgaaacagagggtcatccgtatggtg
gaaatgcagaaagatccaatggaaccaccgcgattcaaaatcaataagaaaattcctcgt
ggacctccatcccctcctgctccagtcatgcactctccaagcagaaagatgactgtgaaa
gaacagcaagagtggaagattccaccctgtatttccaactggaagaacgcaaagggttac
accattcctctggacaagcgtttggctgctgacggacgaggcctgcagaccgtccacatc
aatgagaactttgccaagctggcggaggctttgtacattgcagacagaaaggccagagag
gctgtggagatgagagctcaagtggaaaagaagatggcccagaaagaaaaagaaaagaaa
gaagagaagctgagagagttggctaagatggccagagacaggagagctggaatcaaagcc
cacagtgacaaaggtggtgaagagacagaagtcagggagcgtgatgagatccgtcacgag
aggaggagagaaaggcagcacgacaggaacatctccagagccgcccctgataagaggtcg
aagctacaaagagatcaggacagggacatcagtgagctcattgccctgggacaaccgaac
ccccgtacctccagtgaggctcagtatgaccagcgactcttcaatcagagcaaggggatg
gacagtggttttgccggtggcgaggatgagatgtataatgtgtatgatcagcccttcaga
agtggccgagacatggcacagaatatctacaggcctgggaagaatgcagataaggacgtg
tatggagacgacctggacacactcatgcagagcaacaggtttgttcctgatcgggagttc
tcgggtgcggaccatggcccccgccgcgacggcccggtgcagttcgaggaggatcctttc
ggtctggataagttcttggaggaagccaagcagcacggaggctccaagagggcgtccact
agtggccgctcaaaggactacgaccacgagaagaaacgcaggaaggagtga
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integrated database retrieval system