Pimephales promelas (fathead minnow): 120481466
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Entry
120481466 CDS
T08155
Symbol
elavl1b
Name
(RefSeq) ELAV-like protein 1b isoform X1
KO
K13088
ELAV-like protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120481466 (elavl1b)
03041 Spliceosome [BR:
pprm03041
]
120481466 (elavl1b)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120481466 (elavl1b)
mRNA cycle factors
Stress granule specific factors
120481466 (elavl1b)
Spliceosome [BR:
pprm03041
]
Common components
Common spliceosomal components
General mRNP proteins
120481466 (elavl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
BRAP2
RBD_DEAH11
RRM_DEAH11
BA_2335-like
Motif
Other DBs
NCBI-GeneID:
120481466
NCBI-ProteinID:
XP_039531060
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MAVRRGHIRYLKVCEVQNQGNDRDSHKGASSVKQEVYDMPNGYEDHMGDEPSDAKTNLIV
NYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAGGVKEGHSLGYGFVNYVNPSDAERAIN
TLNGLRLQSKTIKVSYARPSSDSIKDANLYISGLPKTMTQKDVEDMFTQYGRIINSRVLV
DQASGLSRGVAFIRFDKRSEAEEAIKDLNGSKPAGGSEPITVKFAANPNQTKNSQLLSQL
YNTQSRRFGGPVHHQAQRFRFSPMSVDHMSGVSGMNVAGSSSSGWCIFIYNLGQDADEGI
LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMPNYEEAAMAIASLNGYRLGDKVLQVSF
KSSKSHK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcagaagaggacacataaggtatttaaaagtttgtgaggttcagaaccagggt
aatgacagagactcacacaagggtgccagctcagtaaagcaggaagtatacgatatgccg
aacggttacgaggaccacatgggtgatgagccaagtgatgcaaaaaccaacctgattgtc
aactacctgccccagaacatgagtcaggaggagctccgcagtctcttcagcagcattggc
gaggtggagtcagccaaactcataagagacaagatggcaggaggtgtgaaggaaggccac
agtttagggtacggatttgttaactatgttaaccctagtgatgcagaaagggcaatcaat
acactcaatggcctgagactacagtctaaaactatcaaggtctcatatgcccggccgagc
tctgacagcatcaaagatgccaacctttacatcagtggtttaccgaagaccatgacacag
aaggatgtagaggacatgtttacacagtatgggcgtatcataaactcccgtgtactggtc
gatcaggcctcagggctgtcacgtggagttgcattcattcgttttgataagaggtctgaa
gcggaggaagccatcaaagatcttaatggatccaaaccagctggtggctctgaaccaatc
acagtgaaatttgctgcaaatccaaaccagaccaagaattcccaactgctttctcagctc
tacaacactcagtcccgtcggtttgggggacctgttcaccaccaggcacagcgcttcagg
ttttcacccatgagtgttgaccatatgagtggcgtctccggaatgaatgtggcaggcagc
tcttcctctggatggtgtattttcatctataatttgggtcaagatgcagacgaaggcatc
ctgtggcaaatgtttggtccgttcggtgctgtcaccaacgtcaaggtcatccgtgacttt
aacaccaacaaatgcaaagggtttgggtttgttaccatgccaaattatgaggaggcagca
atggccattgccagcctgaatggataccgcctgggagacaaagttctacaagtgtctttc
aaatccagcaagtctcacaagtaa
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