Pimephales promelas (fathead minnow): 120481506
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Entry
120481506 CDS
T08155
Symbol
mcoln1b
Name
(RefSeq) mucolipin-1b
KO
K04992
mucolipin 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04020
Calcium signaling pathway
pprm04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120481506 (mcoln1b)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120481506 (mcoln1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120481506 (mcoln1b)
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120481506 (mcoln1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MCLN_ECD
PKD_channel
Ion_trans
Motif
Other DBs
NCBI-GeneID:
120481506
NCBI-ProteinID:
XP_039531131
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MTSAYIRPSAEGATEKDRLLSPVMGYGSGDLNGGCHRSAPSLDVCVTGPRGPEEEEEALR
RKLKYFFMSPCDKYHAKGRKPFKLVLQLLKIILVTVQLVLFGLSNQMVVAFKEENTDSFK
HLFLKDYLDGSEEPLCIHTQKSVHDHINYTIERYLSLPQTSVGRYAYVRGAGVNDSALYL
CQHYYRKGSIDPVNDTFDIDPHVVTECVGVDPPQDPSAPRQNHFKTLNLNFQKLINVTVQ
FQLKAINIQTIINNEIPDCYTFSITILFDNKAHSGKVKLSLLNDASIKECRDPNVSGHAD
SYARVAFDVLVAVVCGLSLVLCGRSILRGIILQHEFVCYFRQSLGRPVCWADRLEFINGW
YLLLIISDVLTIIASFIKIAIETKNLSSYDVCSILMGTSTLMVWVGVLRYFSFFQKYNIL
IVTLRAAFPSVIRFCCCAAAIYMGYCFCGWIVLGPYHAKFRSLSTVSECLFSLINGDDMF
ATFSDMEQSGALVWVFSQVYLYTFISLFIYMVLSLFIALITGAYDTITQQTQEVPQPSEL
HRFIAECTDTPTSGNFHCPEPSTCSLFCCFS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgcttacatcagaccttcagctgaaggggccacagagaaggaccggctgctg
agtccggtgatgggatacggctccggtgacctgaacggcgggtgtcaccgcagcgccccc
tccctggacgtgtgtgtgacgggccctcgggggccggaggaagaggaggaggccctgagg
aggaagctgaagtacttcttcatgagcccctgtgataaataccacgcgaaaggccgcaaa
cccttcaagctggtccttcagctgctgaagatcatcttagtcactgtacagctggtgctg
tttggtctcagtaatcagatggtggtggcgtttaaagaggagaacaccgactccttcaag
catctgttcctcaaagactatctggacgggtctgaggagccgctgtgcatccacacgcag
aagagcgtccacgatcacatcaactacaccatagagcggtatctgtctctgccgcagacg
tcagtgggaaggtacgcgtatgtccgcggtgcgggtgtgaacgacagcgccctctacctg
tgccagcactactacaggaagggcagcatcgacccggtcaacgacacgtttgacatcgac
ccgcatgttgtcacggagtgtgtcggagtggatccaccgcaagacccttcagctccacgg
caaaaccacttcaagaccttaaacctcaatttccaaaagctgattaatgtgaccgtccag
ttccagctgaaggccataaacatccagaccatcatcaacaacgagattcccgactgctac
accttctccatcaccatcctgtttgataacaaggctcacagcggtaaagtgaagctcagt
ttgctcaacgatgcgtccattaaagagtgccgagaccctaacgtgtcgggacacgcggac
agttatgcgcgcgtggcgttcgatgtgctggtggcggtggtgtgcggcctgtctctggtg
ttgtgcggccgctccatcctcagaggaatcatcctgcaacacgagtttgtgtgttatttc
cgtcagtctctgggccgtccggtgtgttgggccgaccggctggagttcatcaacggctgg
tacctcctgctcatcatcagcgacgtgctcaccatcatcgcctccttcatcaagatcgcc
atcgagaccaagaacctgtcgtcgtatgacgtctgcagtatcttgatgggaacctccacc
ctgatggtttgggtcggggtgttacgatacttcagcttcttccagaaatacaacatcctg
atcgtgactctgcgggccgcgttccccagcgtgatccgcttctgctgctgcgccgccgcc
atctacatgggctactgcttctgcggctggatcgtcctgggaccctaccacgccaaattc
cgctctctctccacggtgtccgagtgcctgttttccctcatcaacggagacgacatgttc
gccaccttctcggacatggagcagagcggggcgctggtgtgggtcttcagtcaggtgtac
ctctacaccttcatctcgctcttcatctacatggtgctgtcgctcttcatcgcgctcatc
accggagcctacgacaccatcacccaacaaacacaagaggtgccgcagccgtctgaactg
caccggttcatcgccgaatgcaccgacacgccgacctccggaaacttccactgtcccgag
ccgtcgacctgctcactcttctgctgcttcagctag
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