Pimephales promelas (fathead minnow): 120481551
Help
Entry
120481551 CDS
T08155
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120481551 (srebf1)
04131 Membrane trafficking [BR:
pprm04131
]
120481551 (srebf1)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
120481551 (srebf1)
Membrane trafficking [BR:
pprm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120481551 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
120481551 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
ZapB
XRCC4_CC
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
120481551
NCBI-ProteinID:
XP_039531179
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MNLSFDDPSLETLDSSMSLHDPSDIDSALLSDIDDMLQLINNQDMEFVGLFDHTSFPGPA
APPLSSPSSPPPASSTPSSSSILSSSPHLDALLGPPISRSSSVPDKAFLPPTFQQSPLAQ
VNSTPANPGTLQTTQPKAQPAPSPSLQPPPTAGKSPVFGLTQQVLFSSPQQQPSVVTFPI
QNTYTAVTQQNSPQPIPNLPASPQNVQPMGIQAQMQSLSTSPILTTASSPPTQTISPQVQ
QVPVLLQPQFIKADSLLLTTLKPDVTMVTTVASPCITTLATSTASVQNTSLQALMSGGTI
LTTLPLMVDTEKMPINRIAVSGKPGGLPHKGEKRTAHNAIEKRYRSSINDKIIELKELVA
GTEAKQLNKSAVLRKAIDHIRYLQQSNQKLKQENMALKMSIQKNKSLKDLVTMEVDVKPE
IPTPPASDVGSPRSSGTFSHHGSDSEPDSPMVEDSKPVVEKAGGMLDRSRMALCAFTMLF
LSFNPLASLLCGGWSSSGESVSGHTGRSMLAMEEAANSWGWMDWMLPTLLVWLLNGVLVA
GVLIRLFVYGEPVTRPHSESSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPT
SQLDLTCAVLWSALRLCLQRLWVGRWLASRAGALRSNRPLQEDARKSCRDAALVYHRLHQ
LHMTGKLGGSHLSAIHMALSALNLAECAGDCLPVATLAEICVSAALRIKTSLPRLVHFTT
RVFLSSARQACLSPSGSVPPAMQWLCHPLGHRFFVDEDWSIRSTPKESIYSQAGNSVDPL
AQVTQAFREHLLEKALYCVAQPQGDKTLTDGDGEYSDALEYLQLLTSASDAAGATTQSFA
IGSNMATVTGCDPHSKWWSSVAVVVINWLQGDDAAAERLYPAVEHLPISLQSAESPLPKA
CLNTFKAVRSLLVKPGSYQLSLSYCEKASVLFRDSLNLGPHCTSNTLDKLVQLLLCDLLL
VTRTSVWREQQVVSQQSCPTAASPVELQGFQQDLSSLRKLAQSFRPAMRRLFLHEATARL
MAGASPTRTHQLLDRSLRRRTPGSRTEECETHPGQREQAEAVMLACRYLPPSFLSAPGQR
VGMLADAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTST
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgtcttttgacgacccgtcactggaaaccttggactccagtatgtctttacat
gatccgagtgatatcgactcggctctgctcagcgacattgatgatatgctccagcttatc
aacaaccaggacatggagtttgtgggtctgttcgatcacacttcatttcctggtcccgca
gccccccctctgtccagcccttcctctcctccacccgcctcctctacgcccagcagctcc
tccatcctcagcagcagcccgcacctggacgccctgctgggcccccccatcagccgcagc
tcctccgtcccggacaaggcgttcctccctcccactttccagcagtctcctctggcacag
gtgaactccacccctgccaatcccgggacactgcagaccacgcagcccaaagcccagccc
gctccatctcccagcctccagccgccccccacggccgggaagagcccggtgttcggcctc
acccagcaggtcctcttcagctccccgcagcagcagccgtctgtggtcaccttccccatc
cagaacacctatactgctgtcactcagcagaactctcctcagccaatcccgaatctcccc
gcctccccacagaacgttcaaccaatgggcatccaagcacagatgcagagcctctcgact
tcaccaatcctgaccaccgcctccagcccacccactcagacaatctcccctcaggttcag
caggttcctgttttgctgcagccgcagttcattaaggcggactctctcttgctcacaact
ctgaagcctgatgtgacaatggtaacaacagtggcttcaccctgcatcacaactctggct
acatccactgcgtcagtccagaacacctcactgcaggcgctgatgagcggaggcaccatc
ctgaccacccttcctctgatggtggacaccgagaaaatgcccatcaatcgcatcgccgtc
agcgggaaaccgggcggcctgccacataagggcgagaaacgcaccgcccacaacgccatt
gaaaaacgctaccgctcctcaatcaacgacaagattattgagctcaaagagctggtggct
gggacggaagctaagcagctcaataagtctgcagtgttgagaaaagccatcgaccacatc
cgctaccttcagcagtccaaccaaaaactaaagcaggagaacatggcactcaaaatgtcc
atccagaagaacaagtctctaaaggaccttgtgaccatggaggtggacgtgaaaccagaa
attcccacccctcctgcatcagatgtcggctcgcctcgatccagcggcaccttctcgcac
cacggcagcgactccgagccggacagcccaatggtagaagacagcaagcctgtggtggag
aaggctggaggaatgctggatcgctctcgtatggctctgtgcgccttcaccatgctcttc
ctgtccttcaacccgttggcatctctgctgtgtggcggctggagtagctctggagagtct
gtctcgggacacacgggaaggagtatgctagcaatggaggaagcagccaattcttggggc
tggatggattggatgttgcccactcttctggtgtggctgctaaacggtgttctggtcgct
ggagttttgatccgactgttcgtctatggggaacctgtcaccagacctcactcggaatcg
tccgtcctcttctggagacaccgcaagcaggccgatctggatctagccaggggagacttt
gctcaggcctctcagaacctctggacgtgtctcaaagctcttggtcgacctctgcccacg
tctcaactggacctgacctgtgctgttctgtggtccgccttgcgtctgtgtctgcagaga
ttgtgggtgggccgctggctagccagccgcgccggagcccttcgctccaaccgccccctt
caggaagacgcacgcaagagctgccgtgatgccgccttggtctaccaccgtctacaccaa
ctccacatgaccggtaagctcggaggaagccacctctctgccatccacatggccctgagc
gcgctcaacctggccgagtgtgccggagactgtctacctgtggccacactggcagaaatc
tgtgtgtctgcagccctacggattaaaaccagtctcccccgcttggttcacttcactact
cgagtgttcttaagcagcgctcgccaggcctgtctctcgcccagtggcagcgtccctcct
gccatgcagtggctgtgtcaccctctgggtcaccgtttctttgtggacgaggactggtcc
atacgcagcacccctaaggagagcatctacagccaggcgggaaactcagtcgacccgctg
gctcaggtgacccaggcgttccgggagcatctgttggagaaggccctctactgtgtggca
cagcctcaaggcgacaagaccctcactgatggggacggggaatactcggacgctctggaa
tacctgcagttactcaccagcgcctcagacgcagcaggagccacaacacagtccttcgcc
atcgggtcaaacatggccaccgtcacaggctgtgaccctcactccaaatggtggtcgtcg
gtggcggtggtggtcatcaactggctccagggcgatgacgcggcggcagagaggttgtac
cccgcggtggaacacttgcccatcagccttcagtccgctgagagtccgctgcccaaagcc
tgccttaacacttttaaagcggtgcgctccctgctggtcaaacctggcagttaccagctc
agcctcagctactgcgagaaagccagcgtcctgttcagagacagcctcaacctcggccca
cactgcaccagcaacactctagacaagctggtgcagttgctgctgtgtgatctgctgttg
gtgacgcgcaccagtgtgtggcgggagcagcaggtggtgtcccagcagagctgtccgacg
gccgcctcgcccgtagagctgcagggcttccagcaggacctcagctccctccgcaagctc
gctcagagcttcagaccggccatgcgcaggttgttcctgcatgaagccacagctcggctg
atggcgggcgccagtccaacacgcacacaccagctcttggaccgcagtctgcgccgccgc
acgcctggaagcagaacagaggagtgcgagactcatccaggccagcgtgagcaggcagag
gccgtgatgctggcgtgccgttacctccccccctccttcctgtccgccccgggccagagg
gtgggcatgctggccgacgccgcccgcacgctggagaaactgggcgacaagcgcacgctc
cacgactgccaacagatgatcatcaaactcggcagcgggacgaccgtcacgtccacctag
DBGET
integrated database retrieval system
