KEGG   Pimephales promelas (fathead minnow): 120481604
Entry
120481604         CDS       T08155                                 
Symbol
fbxw11b
Name
(RefSeq) F-box/WD repeat-containing protein 11b isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04114  Oocyte meiosis
pprm04120  Ubiquitin mediated proteolysis
pprm04218  Cellular senescence
pprm04310  Wnt signaling pathway
pprm04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120481604 (fbxw11b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    120481604 (fbxw11b)
   04340 Hedgehog signaling pathway
    120481604 (fbxw11b)
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    120481604 (fbxw11b)
   04218 Cellular senescence
    120481604 (fbxw11b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pprm04121]
    120481604 (fbxw11b)
   03036 Chromosome and associated proteins [BR:pprm03036]
    120481604 (fbxw11b)
Ubiquitin system [BR:pprm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     120481604 (fbxw11b)
Chromosome and associated proteins [BR:pprm03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     120481604 (fbxw11b)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_C WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-TrCP_D Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 F-box-like Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_SPT8 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_DCAF4 NBCH_WD40 WD40_like Beta-prop_IFT140_1st Beta-prop_HPS5 F-box Beta-prop_WDR11_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_VPS8 PEP5_VPS11_N WD40_2 DUF1513 DUF4508
Other DBs
NCBI-GeneID: 120481604
NCBI-ProteinID: XP_039531268
LinkDB
Position
Unknown
AA seq 531 aa
MEPEMEDKTLELMNTSVMDSQTADRSPKITIFKPIFICPQVSNGPLTGSRKRPSEGNYEK
EKDVCIQLFDQWSEADQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHI
AENILSFLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYL
FKNRTTEVPPNSYYRSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDE
KIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGE
VLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDF
DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE
CGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH
SGRVFRLQFDEFQIISSSHDDTILIWDFLNVSTNGQTEGRSPSRTYTYISR
NT seq 1596 nt   +upstreamnt  +downstreamnt
atggagccggagatggaggacaaaaccttagagcttatgaacacctctgtcatggactcg
cagactgcagaccgctccccaaagattacaatttttaagcctatctttatctgtcctcag
gtgagtaatggacctttgacgggctctaggaagcggccatcggaaggaaattacgagaag
gagaaggacgtgtgtatccagctctttgatcagtggtctgaagctgaccaggtggagttt
gtggaacacctgatctcacgcatgtgccattaccaacacggccacataaactcctacctc
aaacccatgctccaaagggacttcattacggcactgccagctcagggtctggatcatata
gcggagaatatcttgtccttcctggacgcacgctcgctttgttcggccgagctggtgtgt
aaggagtggcagcgtgtcatttctgaaggcatgttgtggaagaagctgatcgagaggatg
gttcggacagacccgctgtggaaaggcctttcagagagacaccagtgggaaaaatacctg
ttcaagaaccgcacaacagaagttcctccgaactcatactaccgttctctttatccgaaa
atcattcaggacatcgagaccatcgaggcgaactggaggtgtggccgacataacttgcaa
aggatccagtgtaggtcggagaacagcaaaggtgtttactgcctccagtatgacgatgaa
aagatcatcagcggtctacgagataactccatcaagatatgggataaacagactctggag
tgtttgaagatcctgacagggcacacaggctctgtgctgtgtctgcaatacgatgagaga
gtcattgttaccggctcctctgattccaccgtcagagtttgggatgtgaactcgggggag
gttttgaacactctgatccatcacaacgaggccgtgctccacctgcgattttgtaacggg
ttgatggtcacctgctcgaaggatcgctccatcgccgtgtgggacatggcctctcccaca
gacatcagtctccgccgagtcctcgtcggtcacagggcggccgtcaatgtggtcgacttt
gacgacaagtacattgtctctgcctctggtgatcggaccataaaggtgtggagtacaagc
acttgcgagtttgttcggacactaaacggtcataagcgaggaatcgcctgcctacaatac
agagacagactcgtggtcagtggctcctcagacaacaccatcaggctgtgggatattgag
tgtggagcctgtttgcgggttttggaagggcatgaggagcttgttcgctgtattcgtttt
gataacaagcggattgtgagtggagcgtatgacggtaaaattaaagtatgggacctacaa
gctgctctcgacccacgagccccagccagcactctgtgtctacgtacactagtggaacat
tctggccgagtgttccggctccaattcgatgagttccagatcatcagcagctcccacgac
gacactatccttatctgggacttcctcaacgtgtcaaccaacgggcagacggaagggcga
tcgccgtcccgcacgtatacctatatatccagatag

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