Pimephales promelas (fathead minnow): 120481678
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Entry
120481678 CDS
T08155
Symbol
itga1
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04510
Focal adhesion
pprm04512
ECM-receptor interaction
pprm04810
Regulation of actin cytoskeleton
pprm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120481678 (itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120481678 (itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120481678 (itga1)
04810 Regulation of actin cytoskeleton
120481678 (itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120481678 (itga1)
04515 Cell adhesion molecules [BR:
pprm04515
]
120481678 (itga1)
04090 CD molecules [BR:
pprm04090
]
120481678 (itga1)
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120481678 (itga1)
Cell adhesion molecules [BR:
pprm04515
]
Integrins
Integrin alpha subunits
120481678 (itga1)
CD molecules [BR:
pprm04090
]
Proteins
120481678 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
FG-GAP_3
VWA_2
Integrin_A_Ig_1
Clathrin
vWA_SIBA-E
LYRIC
WapI
Motif
Other DBs
NCBI-GeneID:
120481678
NCBI-ProteinID:
XP_039531377
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MLSGVYHFTLAALLVLLPWLSCFNVDEKNKMSFSGPVEDLFGYTIQQFENSEGKWVLIGS
PLNGQPANRSGDVYRCPVGQNKSTGCEKFSLSENTTIPNINEVKENMTMGTTLVVNPDGS
GFLACGPQYGYMCGKQQYITGICTNVSSSFKVLNSIAPTVQECKQDMDIVIVLDGSNSIY
PWDPITDFLKKFLQNIEIGPARVGIVSYGDDVGHVFNLSQFSNKEDLVNAAGKIPQRTGH
KTMTALGIDIARKEAFTVERGARPGVKKVMVIVTDGESHDHYDLERVIKECEDDGIERFA
IAVLGDYNRQNKTTEELKKFIDEIESLASNDKNDHFFNVSDELALVTIVDALGSKIFALE
ATSGKHTSSFEMEMSQSGFSAHTSKAGVMLGAVGAYDWNGTVVMQTGSEFVVPKKNTFHD
PKVQRYEGMAGYVGYDVQSAYTPNGVLYITGAPRFNHSGRVLVYRFDGENFTIIQTLKGE
QIGSYFGSVLQTHDIDRDNYTDILLVGSPMYMGPERDEQGQVYVYKLNEDGLFEHEMTLK
PVNQTCCTANSRSNCKSFSKNEPCGSRFGTAIAAVTDLNLDGFNDIVIGSPLENDHRGAV
YIYHGSQKSIKEKYVQRIAAGGDGESMKFFGQSIHGIMDLNGDGIIDVTIGGIGGAALYW
SRDVAELRADMTFDPSKINLQQTCQVHGRTTVCVKTKVCFKYQMKSDKDTITGTLIRYNL
TLDSLRAIARGRFNDSEDRKLQKIELIVNELCREHIFYTSDKLDFRDPIMVTLEFGLVDE
DKGPVLDGELPTSLNKTIALVDCGNDDKCVANLHLKATANISSLFIKSNQEKFYVNINIR
NSGDNAYNTRVTLSHTENINYVKVEPKEKDCETNNTRIVCAVGYPFLKTDKTESFQIQFE
PNPSHIRKDIVINVTATTDSEGSDSALKDYFVSIVIPVKHEANLRFIANKYMKEDHIILK
EKETIPNFFNHTSVIGDEVKISYTIEREPEMASPPLLLTIVFPYQTSAKNLLLYLTDLTH
TANISCDAKKWINPLLIKPDNPHAVNPKKESLSIYLLSCKEERHPCVSFSCSIPPGDFNQ
INSTFRVWRPTFLKGEFSSIYMGVDAKLENKNTDLFVLNDNVKAREVKIQVTKDIRSGIP
LWIIILSILIGLLILALVIFALWKAGFFKRKSVKDMKDDMKESD
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgctttctggagtctatcatttcacacttgcggcgcttcttgttctcctgccgtggttg
tcatgtttcaatgtggacgagaagaacaagatgtcattcagtggaccagtggaggacttg
ttcggatacaccatccaacaattcgagaacagtgagggaaagtgggttctgattggttct
cctcttaacggacagccggccaaccggtccggagacgtttacaggtgccccgtgggacaa
aacaaaagtactggatgtgaaaaattcagtttgtcagaaaacacaacaattccgaacata
aatgaagtcaaggaaaacatgactatggggacgacgctggtggttaacccggacggcagt
gggtttctggcctgtggtcctcagtatgggtacatgtgtggaaagcagcagtacatcact
gggatctgcacaaacgtcagctcctccttcaaagtcctcaactccatcgctccaactgtg
caagagtgcaagcaggacatggacattgtcatagtgttggacggttccaacagcatctac
ccctgggatcccatcactgacttcttgaaaaaattcctccagaacattgaaatcggacca
gcccgggtgggcatcgtgtcgtacggggatgatgtcggccatgtcttcaatctcagccag
ttcagtaacaaagaagaccttgttaatgccgccggcaaaatacctcaaagaactggccac
aaaaccatgacagctctcggcattgatatagcaaggaaagaggcctttacagtggagcga
ggagcaagaccaggggtcaaaaaagtcatggtgatcgtcacagatggggagtcgcatgac
cactacgacttggaacgtgtcataaaggaatgtgaggacgatggtattgaaaggtttgcc
attgctgtccttggcgactataatcggcagaataaaaccactgaagagttgaagaagttt
attgacgaaattgaatcccttgctagcaatgacaaaaatgaccatttcttcaatgtgtca
gatgaacttgctttagtgaccattgtcgatgccttaggaagcaaaatctttgccttggag
gccacatcggggaagcacacctcctcctttgagatggaaatgtctcagtctggatttagc
gctcacacatcaaaagcaggtgttatgctaggagccgtgggtgcttatgactggaatggg
actgttgtgatgcaaactgggagcgagtttgtcgttccaaaaaaaaacaccttccatgac
cctaaggtgcagaggtacgaaggcatggcgggatacgtaggttatgatgtgcagtcagcg
tacacacccaatggagtgctatacatcacaggagcaccacggtttaaccacagcgggcgt
gtcttggtgtaccgcttcgacggagaaaatttcaccataatacagacgttaaaaggagag
cagatcggttcttatttcggcagcgtcctccagacgcatgacattgaccgtgacaattac
actgacatccttctggtcggatctcccatgtatatgggtccagagagagacgaacaaggt
caagtctacgtctacaaactcaatgaggatgggctgtttgagcatgagatgacactgaag
ccggtcaatcagacctgttgtactgctaactctcggagcaactgtaaaagcttcagtaag
aacgagccctgcggctcacgcttcggcactgcaatcgctgccgttactgacctcaacctg
gacggctttaatgacatagtgatcggatcgcctttggagaacgaccacagaggggcggtg
tatatttaccacggttctcagaaatcaataaaggagaagtatgttcagcgaattgctgct
ggaggagatggagagagcatgaagttctttggccaatcgattcacggcatcatggatttg
aatggcgatggaatcattgacgtcactatcggaggaataggaggggccgcactttattgg
tctcgggatgttgcagagcttcgtgccgatatgaccttcgacccaagcaagatcaatctg
cagcagacctgtcaggtccacgggaggaccacagtatgtgtgaagaccaaagtgtgtttc
aaatatcaaatgaagtctgacaaagacacaatcacgggaactctcatcaggtacaattta
acgctggactcgctgagagcgattgccagaggacggtttaatgatagcgaggacaggaaa
ttgcagaagatcgagttgatcgtcaacgagctttgcagagagcacatcttctacacgtcg
gataaactggatttcagagaccccattatggtcacgctggaattcggtttagtggatgaa
gacaagggtccagtcctagacggggaattaccgacgtcactcaacaagactatcgcattg
gtagactgcgggaatgacgacaagtgtgttgctaatctacaccttaaagccactgcaaac
atctcaagtcttttcataaaaagcaaccaagagaagttttatgtcaacatcaacatccgc
aacagtggagacaatgcttataataccagggttacactgagccacacggaaaatatcaac
tatgtgaaagttgagcctaaagagaaggactgtgaaacaaataataccagaatagtatgt
gcagttggatatcctttccttaaaactgataaaacggaaagcttccaaatccaatttgag
cccaatccctctcatattcgtaaggacattgtgattaatgttactgcaacaactgatagt
gaggggtcagactcagctctgaaagactactttgtgagcatcgtcatccctgtgaagcat
gaagccaacctgcgattcattgctaacaaatacatgaaggaggaccacatcatattgaaa
gagaaggagacaatacctaattttttcaaccacactagtgtgatcggagacgaggtgaaa
atcagctacacgattgagagagaacctgaaatggcgagtcctccactgctgctcacgata
gtgttcccgtatcaaacgtctgcaaaaaacttgctgctgtacctcacagatctcacacac
acagcgaacatcagctgtgatgccaaaaaatggattaaccctttactcatcaagcctgac
aaccctcatgcagtgaatcctaaaaaagagtccttgagcatctatcttttgagttgtaaa
gaagaaagacatccctgcgtgtcctttagctgctccatccctcctggagacttcaaccag
atcaacagcactttcagagtgtggcgacccaccttcctcaaaggagaattttccagcatt
tacatgggtgtcgatgccaagctggagaacaagaacacggacctgtttgtgttaaatgat
aacgtcaaggccagagaggtaaagattcaagtgaccaaagacatacgaagcggaatccca
ctatggattattatcctcagtattcttataggacttttaatactggcacttgttatcttc
gctttatggaaggctggattcttcaagagaaaatcagttaaagacatgaaggacgatatg
aaggaatctgattga
DBGET
integrated database retrieval system
