Pimephales promelas (fathead minnow): 120481754
Help
Entry
120481754 CDS
T08155
Symbol
viml
Name
(RefSeq) vimentin like
KO
K07606
vimentin
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120481754 (viml)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120481754 (viml)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120481754 (viml)
04147 Exosome [BR:
pprm04147
]
120481754 (viml)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
120481754 (viml)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
120481754 (viml)
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120481754 (viml)
Exosomal proteins of other cancer cells
120481754 (viml)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
KASH_CCD
KIF21A_4th
TolA_bind_tri
FKBP15
TPR_MLP1_2
BLOC1_2
TPR
DUF1664
DUF4515
Motif
Other DBs
NCBI-GeneID:
120481754
NCBI-ProteinID:
XP_039531494
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MSTSSYRKRFGDVSRSSAFSSRQTSGSVRSRVSFGVSSAPVIYASKSSRVRSSVGMPRLT
SETVDFSLSDALNTEFKANRLSEKAQMQSLNDRFASYIEKVRFLEQQNKILSAELEQLRG
QRSSSIADLYEEEMRDLRRQVDQLITEKARVEVTRDNLAEDMERLREKLQDEILQREDAE
NSMRSFRQDVDNAALARVDLERKVESLQDELAFLKKLHDEELVELQAQIQDQQVQVDMDM
AKPDLTAALRDVRLQYENLATKNIQESEGWYKSKFADLTEAANRNNEALRLAKQEASEYR
RQVQALTCEVDALKGTNESLERQMREMEENFGMESSSSQDNIARLEEDLRSMKDEMGRHL
HEYQDLLNVKMALDIEIATYRKLLEGEESRIAPPLPNFSSFSLRDMMLESKPVTENTFTK
KVLIKTIETRDGQVINESTQNHDDLE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctcctcctacagaaagcgttttggagatgtgagccggagcagcgcgttctcc
agccgtcagacctccggttccgtgcgctcgcgggtgtccttcggcgtctcctcggctccg
gttatttacgcgtccaagagctccagagtccgaagtagcgtggggatgccacgactgacc
tcggagactgtggactttagtctctcggacgccttaaacacggaattcaaggcgaatcgg
ctcagtgaaaaggcgcagatgcagtcactgaacgaccgcttcgccagttacatcgagaag
gtgcgtttcctggagcagcagaacaagatcctgagcgcggagctggagcagctgaggggt
cagagatcgtccagcatcgcggatctgtacgaggaggagatgcgtgacctgaggcgacag
gtcgaccagctcatcacggagaaagcacgcgtggaagtcacgcgagataacctggcagaa
gacatggagcgcctcagggagaaactgcaggatgagattcttcagcgagaagatgcagag
aacagcatgagaagtttcagacaggacgtggataacgctgctcttgctcgagtggatctg
gagaggaaggtggagtctcttcaggatgaactcgccttcctgaaaaagctccacgatgag
gagctggttgagctgcaggcacagatccaggaccagcaggtgcaggtggatatggacatg
gctaaacctgatctgacagcggctctgagagatgtcaggctgcagtatgagaacctggca
accaaaaacatccaggagtcagagggctggtacaaatccaagtttgctgacctgaccgaa
gcggctaacaggaataatgaagctctgcgattggccaagcaggaggccagtgaataccgc
cgtcaggtgcaggcgctcacctgcgaggtggacgccctcaagggaacaaatgaatctctg
gagcgtcaaatgagggagatggaggagaactttggaatggagtcatctagttcccaggat
aacatcgctcggctggaggaggacttgcggagcatgaaggacgagatgggaagacacctg
cacgagtatcaggatttgctcaatgtcaagatggccctggacattgagatcgccacctac
aggaaacttctagaaggggaggagagcagaattgctccccctcttccaaacttctcctcc
ttcagtctgagagatatgatgctcgagtccaagcccgttactgaaaatacatttactaag
aaagttcttattaagaccattgagaccagagatggccaggtgatcaatgagtccactcag
aaccacgatgacctggagtga
DBGET
integrated database retrieval system