KEGG   Pimephales promelas (fathead minnow): 120481754
Entry
120481754         CDS       T08155                                 
Symbol
viml
Name
(RefSeq) vimentin like
  KO
K07606  vimentin
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120481754 (viml)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprm03019]
    120481754 (viml)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pprm04812]
    120481754 (viml)
   04147 Exosome [BR:pprm04147]
    120481754 (viml)
Messenger RNA biogenesis [BR:pprm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     120481754 (viml)
Cytoskeleton proteins [BR:pprm04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     120481754 (viml)
Exosome [BR:pprm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120481754 (viml)
  Exosomal proteins of other cancer cells
   120481754 (viml)
SSDB
Motif
Pfam: Filament Filament_head KASH_CCD KIF21A_4th TolA_bind_tri FKBP15 TPR_MLP1_2 BLOC1_2 TPR DUF1664 DUF4515
Other DBs
NCBI-GeneID: 120481754
NCBI-ProteinID: XP_039531494
LinkDB
Position
Unknown
AA seq 446 aa
MSTSSYRKRFGDVSRSSAFSSRQTSGSVRSRVSFGVSSAPVIYASKSSRVRSSVGMPRLT
SETVDFSLSDALNTEFKANRLSEKAQMQSLNDRFASYIEKVRFLEQQNKILSAELEQLRG
QRSSSIADLYEEEMRDLRRQVDQLITEKARVEVTRDNLAEDMERLREKLQDEILQREDAE
NSMRSFRQDVDNAALARVDLERKVESLQDELAFLKKLHDEELVELQAQIQDQQVQVDMDM
AKPDLTAALRDVRLQYENLATKNIQESEGWYKSKFADLTEAANRNNEALRLAKQEASEYR
RQVQALTCEVDALKGTNESLERQMREMEENFGMESSSSQDNIARLEEDLRSMKDEMGRHL
HEYQDLLNVKMALDIEIATYRKLLEGEESRIAPPLPNFSSFSLRDMMLESKPVTENTFTK
KVLIKTIETRDGQVINESTQNHDDLE
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgtctacctcctcctacagaaagcgttttggagatgtgagccggagcagcgcgttctcc
agccgtcagacctccggttccgtgcgctcgcgggtgtccttcggcgtctcctcggctccg
gttatttacgcgtccaagagctccagagtccgaagtagcgtggggatgccacgactgacc
tcggagactgtggactttagtctctcggacgccttaaacacggaattcaaggcgaatcgg
ctcagtgaaaaggcgcagatgcagtcactgaacgaccgcttcgccagttacatcgagaag
gtgcgtttcctggagcagcagaacaagatcctgagcgcggagctggagcagctgaggggt
cagagatcgtccagcatcgcggatctgtacgaggaggagatgcgtgacctgaggcgacag
gtcgaccagctcatcacggagaaagcacgcgtggaagtcacgcgagataacctggcagaa
gacatggagcgcctcagggagaaactgcaggatgagattcttcagcgagaagatgcagag
aacagcatgagaagtttcagacaggacgtggataacgctgctcttgctcgagtggatctg
gagaggaaggtggagtctcttcaggatgaactcgccttcctgaaaaagctccacgatgag
gagctggttgagctgcaggcacagatccaggaccagcaggtgcaggtggatatggacatg
gctaaacctgatctgacagcggctctgagagatgtcaggctgcagtatgagaacctggca
accaaaaacatccaggagtcagagggctggtacaaatccaagtttgctgacctgaccgaa
gcggctaacaggaataatgaagctctgcgattggccaagcaggaggccagtgaataccgc
cgtcaggtgcaggcgctcacctgcgaggtggacgccctcaagggaacaaatgaatctctg
gagcgtcaaatgagggagatggaggagaactttggaatggagtcatctagttcccaggat
aacatcgctcggctggaggaggacttgcggagcatgaaggacgagatgggaagacacctg
cacgagtatcaggatttgctcaatgtcaagatggccctggacattgagatcgccacctac
aggaaacttctagaaggggaggagagcagaattgctccccctcttccaaacttctcctcc
ttcagtctgagagatatgatgctcgagtccaagcccgttactgaaaatacatttactaag
aaagttcttattaagaccattgagaccagagatggccaggtgatcaatgagtccactcag
aaccacgatgacctggagtga

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