Pimephales promelas (fathead minnow): 120481827
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Entry
120481827 CDS
T08155
Symbol
gigyf1b
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120481827 (gigyf1b)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120481827 (gigyf1b)
Surveillance factors
Other surveillance factors
120481827 (gigyf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
120481827
NCBI-ProteinID:
XP_039531601
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MTAETLNFGPEWLRALSRGGSVTSPPASPAMPKSKLADYRYGREEMLALYVKDNKIPEDM
QDKEFAAILQDESQQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGGGAVPTGVARGRGS
TRGGRGRGRGEGGFYQRSVDEEVGFGRGREMHRSQSWDDRGERRFEKPLRREGGRGGFEE
GGAVSRKDYTRSDSDNWRTLREEAEEDDGTDPGGSWRIAGCRREDGGPRSAGWRDHASGD
GRRRKFDFDFRDGEGGRRRAGSEGGEEDRDGLPEWCTDEEEGEMGTFDSSGAFMCIKKNS
RDAIPEDQELEFEALEEEEESSQEKADSPADKPEECEATAVWDGDRKPSSSSPHAVSAPA
PVHPPEQETPKPIAPPPFKPAPQPAKDAALVGTTPQMKSSFPPSNTGTDRPTVGGDTEEE
DGMKHLQQEAEKMVASLQDTSLEEECFTQALQESHINVAHTHNHPNSHTHSHSTPHTLPH
SASALPLSHESAMKWFYKDPQGEIQGPFTTVEMCEWYQAGYFAINLLVKRGCDEGFQPLG
EVIKMWGRVPFSPGPSPPPLLGNMDQELLKKQLEQAATAALYQQLQMRFQHINRCGETGM
PAMNRSMSVPDTGPLWDMPTSVSQQSGGETSLWDLTMSSSTQGPTLEHLQKIQQERREAE
LRVKREEEERKRREEKRRQQEEQKRREEEDLYRRKQQCRQQQELIMKFLQQSQQQSMSGG
TGWSGSQAGALSLGKASGKSMGLLELEAERFLKQQQQQQRAQQRHGGLTMGQWSDGPAGM
WSGSSMEGKVGGGNPAMGMWDEAMKNQASHRNIGLKNSRSSPSLGDQYLLNRRKRTDDEE
RLLKLLQGMKPQDGFTTWCEQMLHALNSSANNSSSLDVPTIVAYLKEVESPYEVNDFIRI
YLGDTIEAKEFAKQFLERRAKQKANHQRQQQQLSKEVSGLNMNFPLQSMFQAAHMSKGSS
VFDTQGGKAKKKPSMMLHTDPSILGYSFLGGGELEQVEDY
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggtccagaatggctccgtgcactatcaagagggggg
agtgtgacgtcccctcccgcttcccctgcaatgccaaagtccaagttggccgactaccgc
tatggccgcgaggagatgttagcactttatgtcaaagataacaagatccctgaggacatg
caggataaggagtttgctgctatcctgcaggatgagtctcagcagccattggccttggtt
cccctgactgaggaggaacagagaaacttctcgatgtctgtgaacagtgtggctgtgcta
aggcttatgggtaaaggaggcggcgctgtaccaacaggtgtagctagagggcgtggaagc
actcgaggaggtcgagggagaggcagaggagaaggtggattctaccaaagaagtgtggat
gaagaggttgggtttggccgaggacgagagatgcaccgcagccagagctgggatgacaga
ggtgagcggcgcttcgagaagcccttgaggcgtgaaggtgggcgtggtggatttgaggag
ggcggagcagtaagcaggaaggactatacgcgctcagacagcgataactggcggacgctc
agagaggaggcggaggaagatgatgggacagatcctgggggaagctggaggattgccgga
tgtcgtcgtgaagacgggggtcctcgttccgcaggttggcgggatcatgccagtggggac
ggccgtcgtaggaagtttgactttgacttccgagatggagaaggtggacggagaagggct
ggaagtgagggaggagaggaagatcgagatggcctgcctgaatggtgcactgatgaagaa
gagggggagatgggaacctttgattcttctggggccttcatgtgcatcaagaaaaactcc
agagatgcaatccccgaagaccaggaactggaatttgaggctctggaggaggaagaggag
agtagtcaggagaaggcagacagccctgctgataaacctgaagagtgtgaggcaacagct
gtgtgggatggcgacaggaagccatcatcatcatctcctcatgctgtgtctgctcctgct
cctgtgcaccctccagagcaagagactcccaaacccatagctcctcctcccttcaaacct
gcaccccagccagccaaagatgcagctttagttggcaccacacctcagatgaagagctcc
tttcctccctcaaacactggtactgaccgtccaacagttggcggagacaccgaggaggaa
gatggcatgaagcaccttcagcaggaggctgagaagatggtggcgtctctgcaagacacg
tccctcgaagaagaatgtttcactcaagctctgcaggagagccacatcaacgtggcacac
actcacaatcacccgaattcccacacacactctcactcaaccccgcacactctcccgcac
tccgctagcgctctgcccctttcccacgaatccgcaatgaagtggttctacaaagacccc
caaggggagattcaaggtccattcactacagtggagatgtgtgagtggtatcaagcgggg
tatttcgccattaacctgctagtcaaacgtggctgtgatgagggatttcagcccttgggc
gaggttatcaagatgtggggacgtgtgcctttctctcctggcccctcccctcctccgctt
ctggggaacatggaccaggagctgttaaagaaacaattagaacaagctgccactgcagcc
ctgtaccaacaacttcagatgagatttcagcacataaaccggtgtggggagactgggatg
cctgcgatgaacaggtccatgtcagtgccagataccgggcccttgtgggacatgcctacc
tcagtctctcagcagtcaggcggtgagaccagtctgtgggacttaaccatgagtagctcc
actcagggtccaactcttgaacatttgcagaaaatccagcaggagaggcgtgaagctgaa
ctcagggtgaagcgtgaagaagaggagaggaaacggagggaggaaaagcgccggcagcag
gaggaacagaagaggagagaggaggaggatctttatagacgaaaacagcagtgccgtcag
cagcaggagttgatcatgaagtttctgcagcagagccagcagcagagcatgtcagggggt
acagggtggagtggaagccaggcaggagctctctctctaggcaaagcttcaggaaagagc
atgggactcctggagttggaggcagaaagatttctaaaacaacagcagcagcagcagaga
gcacagcaaaggcatggaggcttgactatgggtcagtggagtgatgggccagctgggatg
tggtcaggatctagtatggaagggaaggttggaggtggaaaccctgctatgggcatgtgg
gatgaggccatgaagaaccaggccagccatcgcaacattggcctaaagaacagccgcagc
agtccctctctcggtgatcagtacttgctgaatcggcgtaagcgtactgatgacgaggaa
aggcttctgaagcttcttcaagggatgaaacctcaggacggtttcaccacttggtgtgaa
cagatgcttcatgctctcaacagttctgcaaataactcctcttcactagatgtgcccacc
attgtggcgtatctgaaggaagtagagtctccgtatgaagttaatgactttatccgcatt
tatctcggcgataccattgaagccaaagagtttgccaagcagttcctggagcgccgtgcc
aaacagaaagcaaaccaccagagacaacagcagcagctatccaaggaagtctctggattg
aacatgaacttccccctgcagtcaatgttccaggcagctcacatgagcaagggcagcagt
gtgtttgacactcagggaggaaaagcaaagaaaaagcctagcatgatgctccacactgac
cccagtatcctcggctactcattcctggggggaggtgagctggagcaggtggaggattac
tga
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