Pimephales promelas (fathead minnow): 120481901
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Entry
120481901 CDS
T08155
Symbol
lrrc8da
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120481901 (lrrc8da)
Ion channels [BR:
pprm04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
120481901 (lrrc8da)
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Paralog
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_9
LRR_EndoS
LRR_LRWD1
7tm_7
Motif
Other DBs
NCBI-GeneID:
120481901
NCBI-ProteinID:
XP_039531702
LinkDB
All DBs
Position
Unknown
AA seq
826 aa
AA seq
DB search
MFSLTEVASLNDIQPTYRILKPWWDVFMDYIGVIMLMLAIFSGTMQLSKDQVACLPILEE
STNPEAAQNQPECSASVLTTAPTTTKDLPDSIAHELLSTQSTPLKVEGMKSQPEPRGRKT
NLDYQQYIFVNQMCYHDALPWYNKYFPYLALIHTIMLMVSSNFWFKYPKTSSKIEHFVSI
LGRCFESPWTTKALSETACEDSEENKQRFTGGSVYKKHVSSEDSSQSTPLMETPTVQFPT
EKLIAEAPSLTTLDKKDGEQAKALFEKVRKFRAHIEDNDFIYKLYVAQTAIKALKIILIL
SYTSTFASKISFCHICQPKIESLTGYDQFICTHNMAFMLRKLLFTFMAMICLYGLVCLYT
LYWLFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQLYSKRFGVFLSEVSE
NKLREISLNHEWTFEKLRQHVTSNAQDEQELHLFMLSGLPNAVFDLTDLEILKLELIPEV
RISAKVSQMTNLRELHLYNCPAKVEQSAFTFLRDHLRCLHIKFTDVAEIPTWIYLLRSLK
ELNLIGNLNSEHNKMIGLESLRDLRHLRTLYLKSNLNKIPTNLTELSAHLVRLVIHNDGT
KLLVLNSLKKMTSLVDLDLQNCDLERIPHAIFSLANLQELDLKNNNIRTIEEIISFQHLR
RLVCLKLWYNKISAIPPSIGLVKSLESLIICHNKLETLPPALFHLPKLRHIDLSNNSISS
IPVEIGHLHNLQHFAITGNKVEVLPNQLFKCSKLKVLFVGHNSITSIPESIGQLVQLSQL
ELKGNCLDCLPFKLGQCHLLRKNHLFVEDHLFDTLPLEVKESISSD
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtctcactgaagttgcctcccttaatgacatccagccaacctaccgtattctg
aaaccatggtgggatgtgttcatggattatattggggtgataatgttgatgttagccatc
ttttctgggactatgcagttatctaaagaccaagtggcatgtcttcccattcttgaggaa
agcacaaaccctgaggcagcacaaaatcaaccagaatgttccgcatcagttctgacgact
gcacccacaaccactaaagaccttcctgacagcattgcacatgaacttcttagcactcaa
tctacccctttaaaagtagagggtatgaagtctcaacctgaacccagaggacgtaaaaca
aacctggactatcagcagtatatttttgtcaaccaaatgtgctaccatgatgccctacca
tggtataacaaatactttccttaccttgccctcatacacaccataatgctgatggtaagc
agcaatttttggttcaagtacccaaagaccagctcaaagattgaacactttgtttccatt
ttgggacgatgctttgaatcgccatggacgacgaaagctttgtccgaaaccgcttgtgaa
gattctgaggaaaacaagcaaaggttcacaggtggttcggtttacaaaaaacatgtatcc
tcagaggacagcagtcagtctactcctttaatggaaactccaacggtgcagtttcctacc
gaaaagctcattgcagaagctcccagcctgaccaccttagacaaaaaagatggagaacaa
gccaaggctctttttgagaaagtgcgaaaatttcgagctcacatcgaagacaatgacttc
atctacaaactctatgtggctcagacagcaataaaagcactaaagatcattttgattttg
agctatacatcaacgtttgcctcaaagatcagtttctgccatatatgccaacctaaaatt
gaaagtttgaccgggtatgatcaattcatttgcacgcacaacatggcattcatgttaagg
aaacttctcttcaccttcatggctatgatatgtctctatggcctggtgtgtttgtataca
ctctactggctcttcaggagacctcttaaggagtactcttttgaaaaagtcagagaggaa
agtagctttagtgatattcctgatgtcaagaatgactttgcgtttctcctacacatggtc
gaccaatacgatcagctgtactccaagcgatttggtgtatttctctccgaagtcagtgag
aacaaactacgagaaattagccttaaccacgagtggacgtttgaaaaactgcgtcagcat
gtgacatccaatgctcaagatgaacaagaacttcacctctttatgctgtcaggactccct
aatgctgtatttgacctcaccgatctggaaatcctcaagttagagcttattcctgaggtc
agaatttctgccaaagtttctcagatgaccaacctacgggaactacatctatataactgc
cctgctaaagtcgaacaatccgctttcacttttctccgcgaccacctgcgatgccttcac
attaagtttactgatgttgcagaaatcccaacgtggatttatcttttgaggagcctcaag
gaactgaacctgattgggaacctgaactctgaacacaacaagatgattggtttggagtca
ctgagagatctgagacacttgcggacattgtatctcaaaagcaatcttaacaaaataccc
acaaatctaacagaactgtcggcacatctcgtcagactggtgattcacaatgatgggact
aaattactggtactgaacagtctcaagaagatgaccagcctagtggatttggatctccag
aactgtgatttggagaggatcccccatgccatctttagcttggctaacttgcaagaactg
gacttgaagaataacaatatccggaccattgaggaaatcatcagctttcagcacctgaga
agattggtgtgcctcaagctgtggtacaacaagatcagtgccattccaccatcgataggc
ctagtaaagagtctggagtccctcattatctgtcacaataaactggagacccttcctcca
gctttgtttcatctgcccaaactgaggcacattgacctcagcaacaactccatctcaagt
ataccagtggagattggacaccttcacaaccttcaacattttgctatcacagggaacaag
gtagaagttctgcctaatcaactgtttaaatgttccaaactgaaggttttatttgtgggt
cataacagcatcacctccatcccagagtccattgggcagttagttcagctgtcccaactt
gagctcaaagggaactgcttagattgccttccatttaagcttggccagtgtcaccttctt
cggaaaaaccacctcttcgtggaggatcatctttttgacacactgcctcttgaggtcaag
gaaagtatcagtagtgactaa
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