Pimephales promelas (fathead minnow): 120481949
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Entry
120481949 CDS
T08155
Symbol
tars3
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120481949 (tars3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pprm01007
]
120481949 (tars3)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprm03016
]
120481949 (tars3)
Enzymes [BR:
pprm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
120481949 (tars3)
Amino acid related enzymes [BR:
pprm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120481949 (tars3)
Transfer RNA biogenesis [BR:
pprm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120481949 (tars3)
Prokaryotic type
120481949 (tars3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
CCD97-like_C
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
120481949
NCBI-ProteinID:
XP_039531790
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MAERVAERLSAQEAQVEALGGEILRLQELLTGGFDFTTSGPDLDDLITENQKLRYRLVHL
RRSLEEEKEKEKKKEEKDEEENKEEKGKGKKKKKETKTQKSQNKTEEPKEKIHLKQSSAP
SRSSASDAEEKQKEKPDTEKLRSWPGFVSERLELYERLKEESDALLAERAALSLSISVSL
PDGHTLTATAWVSTPYQLACALSRGLADNCVIARVNGELWDLDRPLETDCSLELLRFDHE
DAQAVYWHSSAHILGEAMECFYGGCLCYGPPIDNGFYYDMFLDGHKGVSSSEFADLELLC
RGIIKDKQPFERLEVRKETLLQMFKYNKFKCRILNEKVSTATTTVYRCGPLIDLCRGPHV
RHTGRIKALKIYKNSSTYWEGRSDMETLQRIYGISFPDGRMMKEWERLQEEARSRDHRRI
GKDQELFFFHDLSPGSCFFLPRGAFIYNTLTEFIREEYCRRGFQEVASPNIYNSKLWETS
GHWQLYSENMFSFAVEQDVFALKPMNCPGHCLMFGHRPRSWRELPLRLADFGVLHRNELS
GTLTGLTRVRRFQQDDAHIFCSMDQIESEMKGCLDFLRCIYDVFGFSFQLHLSTRPEKFL
GDVAVWNQAEKQLENSLNEFGEPWKLNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQ
LPVRFNLTYVGKDGDDKARPVIIHRAILGSVERMIAILTENYAGKWPLWLSPRQVMLVPV
NPSLEEYAKQVCKRFVEAGFMADADLDSSCLLNKKIRNAQLAQYNFILVVGEKERVTNSV
NVRTRDNKVHGEVCVEEVMARLTRIRRSRCRSAEEDF
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcgttgcggagcgtctgtccgctcaggaggctcaggtcgaggcgttgggt
ggcgagatcctccgcctgcaggagttactgacgggcgggttcgacttcacaaccagcggc
ccggacctggacgatctgatcaccgagaaccagaagctccgctaccggctagtgcacctc
cgcaggagcctcgaggaggagaaggagaaggagaagaagaaggaggagaaagacgaggag
gagaataaggaggagaaggggaaggggaagaaaaagaagaaggagacaaagacacagaag
agccagaataagactgaagaaccaaaggagaagatccacttaaagcagagttctgcaccg
tcacgatccagtgcatcagatgctgaagagaagcagaaggagaagcctgacactgagaag
ctgaggtcgtggcctggtttcgtctctgagcgtctggaactctacgagcgtctgaaggag
gagagcgatgctcttctggccgagcgagcggccctctctctctccatcagtgtgtcgctg
ccggacggacacacactcacggccacagcctgggtcagcaccccgtatcagctggcctgt
gccctcagtcgaggtctggcggataactgtgtgatcgcgcgtgtgaacggggaactgtgg
gatctggaccgaccgctggagaccgactgcagtctggagctgctgcgcttcgaccatgag
gacgctcaggccgtgtactggcactcgagcgctcatatcctgggcgaggccatggagtgt
ttctacggcggctgtctctgctacgggccgcccatcgacaacggcttctactacgacatg
ttcctggacggacacaaaggagtgtcgagctcagagtttgctgatctggagctcctctgc
cgaggcatcatcaaggacaagcagccgttcgagagactggaggtgcggaaggagacgctg
ctgcagatgttcaagtacaacaagttcaagtgtcgcatcctgaacgagaaggtttccacg
gcgaccacgacggtctacaggtgtggccctttgatcgacctgtgccgcggcccgcatgta
cggcacaccggaaggatcaaagcactcaagatctataagaactcgtccacgtactgggaa
gggcgctccgacatggagacgctgcagcggatctacgggatctcttttcccgacggcagg
atgatgaaggagtgggagcggctccaggaggaggccagaagccgagaccaccgcaggatc
gggaaggatcaggagctgttcttcttccacgatctgagtcccggaagctgcttctttctt
ccccgaggagcgttcatctacaacacactgaccgagttcatcagggaagagtactgtcgg
cgtggctttcaggaggttgcgtctccgaacatctataactctaaactgtgggagacgtcg
ggtcactggcagctgtacagcgagaacatgttctcgttcgcggtggagcaggacgtgttc
gctctgaagcccatgaactgccccggacactgcctgatgttcgggcaccggccgcgctcc
tggcgagagcttcctctcagactggccgacttcggtgtgctgcaccggaacgagctctcg
ggaacgctgacgggtctcacgagggtccggcgcttccagcaggacgacgctcatatcttc
tgctctatggatcagatcgagtccgagatgaagggttgtctggatttcctgcgctgcatc
tacgacgtcttcggcttctccttccagctgcatctctccacgcgtcccgagaagtttctg
ggcgatgttgccgtgtggaatcaggcggagaagcaactggagaacagcctgaacgagttc
ggagagccgtggaagctgaatcctggcgacggcgcgttttacggaccaaagattgacatc
cagattaaagacgccatcggccgttatcatcagtgcgccacgattcagctggacttccag
ttacccgtgcgcttcaatctcacatatgtggggaaagatggggatgacaaggccagaccg
gtgatcattcaccgcgccattctgggctcagtggagcgaatgatcgccatcctcaccgag
aactacgccgggaaatggccgctgtggctgtctcctcgtcaggtgatgctggtgccggtt
aacccgtctctcgaagaatacgccaaacaggtctgtaaacggtttgtcgaggctggtttt
atggccgatgctgatttggattccagttgccttctgaacaagaaaattcgcaacgcacag
ctggcgcagtacaacttcatcctggtggtgggagagaaggagcgtgtcacgaacagtgtg
aacgtgcgcaccagagacaacaaggtgcacggagaagtgtgtgtggaggaggtgatggcc
agactgactcggatccggcggtcgcggtgccgcagcgctgaggaagacttctga
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