Pimephales promelas (fathead minnow): 120481952
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Entry
120481952 CDS
T08155
Name
(RefSeq) leucine-rich repeat-containing protein 49-like
KO
K16606
leucine-rich repeat-containing protein 49
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120481952
04812 Cytoskeleton proteins [BR:
pprm04812
]
120481952
Cilium and associated proteins [BR:
pprm03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
120481952
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
120481952
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_LRWD1
LRR_R13L1-DRL21
LRR_NXF1-5
LRR_6
LRR_14
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
120481952
NCBI-ProteinID:
XP_039531795
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MDISQIENVSGLSKLRLLNLSGNRIARVENLRGLQSLTELNLRHNSISDVTDLQYLPRLQ
RLFLSANSISSLDALACLWDCRSLSELSVDGNPVALESCYRHTLLRCCSPHLQLLDMRRV
TEEERRSASVSARKEDEKKKESHKLAAHKERRRLAIQNAAHQWEGLKQNEAQQWEGLKAS
SLEIPAQNGSKEDVSSDNSPAHSPAQTNGSAQETSPDEPRRLSPLTLSAGGLRSASRPNS
PRDSRFQDVQSLSMSERHLAELEGDTLRLFGPGALETLERCWGVQTASSVTTVSFRYIHF
DSIIPTFLRIRLKFPNLTHLMFTETSISHLPQLAALAQIRRLDQITVRPEGNPVVRLTLW
KSFLIYRLQHLNLQKINGTEVTMNDITASELMFGALGHVAATETPRCRMLLLLEESRKRQ
LQFLLDGRGRRTGQSPEELKDNGKHAGDGLSRALFNYPSRVSDGPEEEGDVSQRSAMVHQ
YLRGLVHRASSHSVKGETLQKIWPSLFAELVRDCVLEMRDTQAFRQTCLQRITHSK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggatatctctcagattgagaacgtgtcgggtttgtcaaagcttcgtttgctgaatctg
tcggggaaccgcatcgctcgagtggagaatctgcggggcttgcagagtctgaccgaactc
aacctgcggcacaacagcatctcggacgtgacggatctgcagtatcttcctcgtctgcag
cgtctgtttctcagcgctaacagcatcagcagtttggatgcgctggcctgtctgtgggac
tgccgctctctgagtgagctgagcgtcgatgggaatcccgtggcgctggagtcatgctac
agacacacactcctccgctgctgctcgccacaccttcagctgctcgacatgaggcgcgtc
acggaggaggagagacgctcagcgagtgtttcggcacgaaaggaggatgagaagaaaaaa
gagagtcacaaactggctgcgcacaaggaaaggcgtcgactggcgatccagaacgcagcg
catcagtgggaggggcttaaacagaacgaggctcagcagtgggaggggcttaaagcctcg
agcctcgagattcctgcgcagaacggctcaaaggaagatgtcagttcagacaatagcccc
gcccacagccctgcgcagactaatgggagcgctcaggagacctccccggacgagcccagg
cgcttgagtccgctcacactctcagctggagggttacgatcggccagtcgcccgaacagc
cccagagactccaggtttcaggacgttcagagcctgtcgatgtcggagcgccacctggcg
gagctggagggcgacacactgcgcttgttcggccccggggccctggagacgctggagcgg
tgctggggggtccagacggcctcgagcgtcaccaccgtctccttcagatacatacacttc
gactccatcatccctacattcctgcgcatccgcctcaaattcccaaacctcacgcacctg
atgttcacggagacgagcatctctcatcttcctcagctggcggctctggctcagatccgg
cgtctcgatcagatcaccgtccgtccggagggcaatcctgtggtgcgactgacgctctgg
aaatctttcctcatctacagacttcagcatctcaacctgcagaagatcaacggcacggag
gtgactatgaatgacatcacggcctccgagttgatgttcggggctcttggtcacgtcgct
gcgaccgaaacgccacgctgccgcatgcttctgctgctggaggagtccaggaagcgtcag
ctgcagttcctgctggacggccgcggtcggagaaccggtcagagtccagaggaactgaag
gacaacggcaaacatgcgggagacgggttgagccgagcgctcttcaactaccccagccga
gtgtccgacggccctgaggaggagggtgatgtttcccagcgctcagcgatggttcaccag
tatctgcgaggtctggtccaccgggcctccagtcacagcgtgaagggagaaaccctacag
aagatctggccgtcgctgttcgccgagctcgtgagagactgtgtgctggagatgagggac
acacaggcgttcagacagacgtgtctccagcggatcacacacagcaaataa
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