Pimephales promelas (fathead minnow): 120481997
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Entry
120481997 CDS
T08155
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04140
Autophagy - animal
pprm04142
Lysosome biogenesis
pprm04148
Efferocytosis
pprm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
120481997 (vps11)
04140 Autophagy - animal
120481997 (vps11)
04148 Efferocytosis
120481997 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120481997 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120481997 (vps11)
Membrane trafficking [BR:
pprm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120481997 (vps11)
Hops complex
120481997 (vps11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
TPR_Vps41
Clathrin
zf-rbx1
Beta-prop_WDR3_1st
zf-C3HC4_2
zf-RING_2
Beta-prop_WDR36-Utp21_1st
zf_RING_Vps8_fungal
zf-C3HC4
TPR_GEMI5
zf-C3H2C3
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-RING_Vps41
Beta-prop_EML_2
zf_RING_Vps8
TSGP1
DivIC
zf-C3HC4_3
Glyco_transf_10
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
120481997
NCBI-ProteinID:
XP_039531837
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MAAFLQWRRFVFFDKETVKDPSENGKNFQLPMGISACDSGRGHIVLGDMDGQIWFLTRSL
QLSSFQAYKLRVTHLYQLKQHNILVSVGQDEHGINPLVKVWNLDKKDSGSPLCTRIFPAI
PGNKPTEVSCLGVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLSLHEGSCPITGLAFR
QAGKVTHLFVATLEKVQCYTLSVKEYPRIDLDTHGCALRCSALTDPSQDSQFIVAGEDCV
YLYQPDERGPCFAFDGHKLLTQWHRGYLLLLTHNNKSPSKSDYGSRQTSPTEKHILTIYD
LDNKFIAYSAAFDDVIDVLAEWGSFYVLTRDKTMYMLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDNDGLSEIFRHYGDHLYTKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSNESEVHFDVEIAIKVLRQA
GYHSHAVFLAERHMHHEWYLKIQLEDLKNYQEALRYIGRLPFDQAESNMKRYGKTLMHHV
PESTTILLKRLCTDYHPSKDSTDRDSLDRPVENKANPEEFIPVFANNPRELRAFLEHMIQ
VDPFSPEGVYDTLLELRLQDWAHEQDPGKKKVLQEAALSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDKEVCLWEQALGYFARKEENCK
AYISEVLQHIDENNLMPPLLVVQTLAHNSTASLSVIKDYLINKLERETSQIEEDERKIQQ
YREETTNLRAEIKELKTSAKIFQKTKCSMCNSPLELPSVHFLCGHSFHQHCLESFAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDHFHRQLKCSNDGFSVIADYFGRGVFNKLTLITD
PPGGKSGAGNLEAEFNRDLLINTKRNV
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcttacagtggaggcgatttgtgttttttgataaagaaacggtgaaagat
ccgagtgaaaatggaaaaaatttccaactaccgatgggtatatcagcctgtgattcaggt
cgaggacacattgtgcttggagatatggatggacagatctggtttttgacccgctccctg
cagctgtccagctttcaggcttataaactgcgcgtgacacacctgtaccagctgaaacaa
cacaacatcctggtgtcagtgggtcaggatgagcatggcatcaatcctctggtgaaggtg
tggaaccttgataagaaggacagtggcagtcctctgtgtacccggatattccctgccata
cctggaaacaaacccactgaagtgtcttgtctcggtgtacatgaaaaccttaattttatg
gctataggttttacagatggcagtgttgtgctgacaaaaggtgacatcaccagagacaga
cacagtaaaaccctcagcctccatgagggcagctgtccaatcacaggcctggctttccgg
caggccggcaaagtcacacacctgtttgtcgccactttagaaaaagtgcagtgttacaca
ttgtcagtgaaagagtaccctcgtatagacctggacactcacggctgtgcgctgcgctgc
tcggcgctcacagacccctcgcaggactcacagttcatagtggccggagaggactgtgtg
tatttgtatcagcctgacgagagaggaccctgtttcgcatttgatgggcacaagcttcta
actcagtggcacagaggatacctgctactgctcacgcacaataacaagtcgcctagcaaa
tctgattatggtagcagacagacatcccctacagaaaagcacatcctgaccatttacgac
ctggacaacaagttcatcgcttacagtgcagcgtttgatgatgtcattgacgttctggca
gaatgggggtcgttctatgtcctaacaagggataaaacaatgtatatgttgcaagaaaaa
gacacacagaccaagctagagatgctgtttaagaagaacctgtttgtgatggccattaat
ttggctaaaagtcaacacctggacaatgatggtctgtctgagatatttagacattatgga
gaccatctctataccaaaggggatcacgatggagccattcaacagtacattcgcactatt
gggaagctcgaaccctcgtacgtaattcgtaagtttttggatgcacagaggatacataac
ctgacagcgtacctacaggccctccacaggcagtccctggccaacgctgaccacactact
ctactgctgaactgttacaccaaactgaaggacagctccaagctggaagagttcataaag
agcaatgaaagcgaggtgcatttcgatgttgaaatcgccatcaaggtattacgtcaggcc
ggttatcacagtcacgccgtgtttctggcagagagacacatgcaccatgaatggtatttg
aagatccagctagaggatttgaagaattatcaggaggctttacgctacataggaaggttg
ccatttgatcaggcggagagtaatatgaagcgctatggtaaaacactaatgcaccatgtg
cctgagagcaccactatcctcttaaaacgtctctgcaccgactatcaccccagcaaagac
tcaactgaccgggacagtctggataggcctgtggaaaacaaggccaatccagaggagttc
atcccagtgtttgcaaataacccaagagagctgcgggcgttcctggaacacatgattcag
gtggatccgttctctcccgagggagtttatgacactttactagagctcagactacaggac
tgggcacatgaacaggacccagggaagaagaaggtcctgcaggaggcagcactgtccctt
ctgaggagtgacaacactgtgtttgacaaggccctggtgctctgccagatgcacaacttc
aaggaaggagtgctgtatctgtatgaaaagggcaaactgtaccaacagatcatgcattac
cacatgcagaatgaagagtatgggaaagttgtggaggcctgtaagcgctatggtgacaaa
gaggtgtgtttgtgggaacaggcgctaggctattttgcacggaaagaagagaactgcaaa
gcctacattagtgaagtcctgcagcacattgatgaaaataacctgatgccgcctcttctg
gtggtgcagactttggcccataattccacagcatctctgtcagtcataaaagactacctg
ataaataaacttgagagggagacctcacagattgaggaagacgaaaggaagattcaacag
tatagagaggagacgaccaatctacgtgctgagataaaggaacttaaaaccagtgcaaag
atcttccagaagaccaagtgcagcatgtgtaacagcccgctagagctgccgtctgtgcac
ttcctgtgtggccactccttccaccagcactgtttagagagcttcgctgagagtgaggcc
gagtgccccacctgcacccctgagaacaggaaggtgatggacatgttgcgtgcccaagat
cagaaacgagacctgcatgaccatttccacagacagttgaaatgctctaatgatggcttc
tcagtcatcgctgattattttggccgtggagtgtttaacaaactcactctgataacggat
cctcctggaggaaagagtggagctgggaatctggaggctgaattcaacagagatctgctc
attaacaccaagaggaatgtttga
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integrated database retrieval system
