KEGG   Pimephales promelas (fathead minnow): 120482064
Entry
120482064         CDS       T08155                                 
Symbol
per1a
Name
(RefSeq) period circadian protein homolog 1a isoform X1
  KO
K21944  period circadian protein 1
Organism
pprm  Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pprm03400]
    120482064 (per1a)
DNA repair and recombination proteins [BR:pprm03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    120482064 (per1a)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_11 PAS_3 PAS
Other DBs
NCBI-GeneID: 120482064
NCBI-ProteinID: XP_039531961
LinkDB
Position
Unknown
AA seq 1414 aa
MSNDNSQTSVSCTTSTETERRTHKDERKTHSNASTEMTDSQSVLPGLDILTVPQLTHSDD
TDTHSSGNDSTERESEGHMGRDTSTSSSHNGKGSTTETTESKSPSPPSSSVSFSLLSGSP
EQDQPTSLSGSGDHQAARLQTQRELLKALRELKVRMPAERRRKGRSSTLASLQYALSCVK
QVRANQEYYHQWSVEESHGCCLDLSSFTIEELDNITSEYTLQNTDTFSVAVSFLSGKVVY
ITSQAASLLRCKPERLQGALFSELLAPQDVSTFYSNTAPSRLPAWSSCAGTTSQVDCAEE
KSMFCRISRGRDSDGNEVKYYPFRLTPYQLTLRDSDTSQPEPCCLLIAERVHSGYEAPRI
PADKRIFNTSHTPDCLFQEIDERAVPLLGYMPQDLVGKPVLIYLHPEDRLLMVAIHKKII
QFAGQPFDHSPLRMRAQSGEYLTLDTSWSSFINPWSKKVAFIVGRHKVRTSPLNEDVFTA
PAGGEVKTMPPDVPQLNEVIQRFLVQPIHAASSKGYGSLGSSGSHEHQQGATSSSESNGH
SSGDQIKPRKPMTFEQICKDMQMVKASGQQVFIESRNRPPALKPGSLEALAKAADTAEAS
AREGLAGLALSSPPRKEPTIYSYQQINCLDSIIRYLESFNVPGTVKRKCGSSSYTSSSSN
DDKQREETGETEETLVVTEGSKVVPAAPGHPLTPLALHYKAESVVSATSQCSFSSTIVHV
GDKKPPESDIIMMEEPPTTPTPSTSVPPTAVASANLQQNPSPTAAVPEKEKEKEKERRGG
GSPGKGLTKAMLSTHTQQEEQAFLNRFRDICQLRMAQPSEPPQLRSTSTPGTKGVNSSQN
YPSVDNSNSRRHGRGGKRRKHQIENNIPSLSVSGPHRGSNPTAIRPNFPSTQHSSTSWQP
SVASQTSHAPMMTSIPPGYMPMFPISSPFLMPQMGMDPSLQGVPRFPMQGFAPVMPPDMT
FMMPNYIVPQLGNPGPQFNPANFQLSGQLPAQMNPLGQFPCSFVQMNPGVPLFNPPVGQL
HPLGSQMNPTMPAVIPHQFYNPNPPFIFPNSPSMPAGNANTTLHGQSRSSTPHSTGQQAG
EREGAESPLFQSRCSSPLNLLQLEELPSNRTDATLQTPPPGLGATQVGGTVLQNRSNTKD
AKPDNSHEVNESNQDSMSTSSDMLDLLLQEDSRSGTGSAASGSGSSGSGSGSGSGSFGSG
SNGCSTSGSGTRSSNTSKYFGSIDSSENDHTHKPASGDLGGEPFINIVLQDPIWLLMANT
DDKVMMTYQIPIKDRDSVLKEDRNALKDVQEHQPHFTEEQKKELTQVHPWIQTGCLPKAI
NITSCTGCATSPDFLTPPFDLEFHEMDLSMIFKEEAKQQDKLITAEIAFPLSPPSSDYEQ
IDNQASTSTVGVGHGGGGSDIISESEEGLQTAGQ
NT seq 4245 nt   +upstreamnt  +downstreamnt
atgagtaatgacaattcccaaacatctgtgagctgtaccactagtacagagacggaaaga
agaacacataaggatgaaaggaaaacccacagtaatgcttctaccgaaatgactgacagc
cagtccgtccttcccgggctggacatcctaacagtacctcaactaacacactcagatgac
actgatacccattccagcgggaatgactcgaccgagagggagagcgaaggacacatgggg
cgagacacatccaccagcagctctcacaatggcaagggttcaaccaccgagacaacagaa
agcaagagtccctcccctcctagcagctcggtgtcattcagtcttttgagtggcagcccg
gagcaggatcagccgacctccctatcaggcagcggtgaccaccaggcggcccggttgcag
acccagagagagctgctaaaggccctgcgcgagctgaaggtccgcatgccggcggaacgg
cgcaggaagggtcgatctagcaccctagcctccctgcagtatgcgcttagctgtgtcaag
caagtgagagctaatcaagagtactaccatcagtggagtgtggaagagagccacgggtgt
tgtttggacctgtcgtcgtttactattgaagagctagacaatattacgtcagagtacacc
cttcaaaacacggacacgttctctgtggcggtgtcgttcctctctggtaaagtggtgtac
atcacatcccaggcggcctctctgctgcgctgtaaacccgagaggcttcagggggctttg
ttttcggagctgctcgcgcctcaggacgtcagcaccttctacagcaacaccgctcccagc
cgcctgccggcgtggtcctcctgcgcaggcaccacctcacaggtggactgtgccgaggaa
aagtcaatgttttgtcggatcagcagaggtagggacagtgacggtaatgaagtgaagtat
taccccttccgtctcacaccatatcagctaaccctgagggactccgacacgtcccaacct
gagccctgctgcctcctcatcgctgagagagttcactctggctacgaggcacctcgtatc
ccagcagataagagaatttttaacaccagtcataccccagactgtcttttccaagaaatc
gacgaaagggcagtgccattacttggttacatgccgcaggacttggttgggaaaccagtg
cttatttacttgcatccagaagaccgactccttatggtggccattcacaagaaaattatc
cagtttgcagggcagccatttgaccactcgcccctgcgtatgcgtgcacaaagtggggag
tacctgaccctcgacaccagctggtcatccttcatcaacccctggagcaagaaggtggct
ttcatagtgggacgccacaaagttcgaacgagtccattgaacgaggacgtgttcactgcc
ccggcgggcggggaggtgaaaaccatgcccccagatgtgccgcagctgaacgaggtgatc
caaaggttcctggtgcagcccattcatgctgccagctcaaaggggtacggtagcctgggc
agcagcggctcacacgagcaccagcaaggtgccacttcctcctctgagagtaacggacat
tcttctggggaccagatcaagcccaggaaaccaatgacgtttgagcagatttgtaaagac
atgcaaatggtaaaggccagtggacagcaagtcttcattgaatcccgaaaccgtccgcca
gctctcaaaccgggtagcttagaagcactggcaaaggcagcagacacagcagaagcctct
gctagagaaggtctggcaggtttggcactgtcaagtccacctaggaaggagcccacaatc
tactcataccagcagatcaactgtctggatagcatcatacgatatctggagagctttaat
gtccctggcacagtgaagaggaagtgtggctcatcttcctatacctcttcttcctctaat
gatgataaacaaagggaagaaactggagaaaccgaagagactcttgtggtgactgagggg
tcaaaggttgtccctgcagcaccaggacaccccctaacccctctggctctgcactataag
gcagaaagcgttgtctctgccacttcccaatgcagtttcagcagtaccatcgttcatgtt
ggtgacaagaagccacctgaatcagacattattatgatggaggaaccaccaaccacccca
acaccttccacgtcagttccacccactgctgttgcctctgccaaccttcagcagaacccg
tcacccactgctgctgttcccgagaaagaaaaggagaaggagaaggagagaagaggtgga
ggaagtccaggaaagggcctcacgaaggctatgttatccacacacacccagcaagaagag
caagccttcctcaatcgttttagagacatctgccagctgcggatggcccaacctagcgag
ccaccacagctcagaagcacgtctacacctgggacaaaaggagtgaatagctcccagaac
tatccttcagtcgataacagcaatagtcgtcggcatggcagaggtgggaaaagacggaaa
caccaaatagaaaacaacattccctccctctctgtatctggcccccatagaggatcaaat
cctacagcaataagacccaacttcccttcaacccagcactcttccacatcttggcaacca
tctgtggcatcccagacaagtcatgctcccatgatgacctccattccaccaggttacatg
cccatgtttcccatttcgtcacctttcttgatgccccagatgggtatggatccttctttg
caaggagtgcctaggttccccatgcaaggctttgctccagtgatgccgccagacatgacc
ttcatgatgcccaactatattgttccacaacttggtaatccaggaccacagtttaaccca
gctaactttcagctcagtgggcaactgcctgcccagatgaaccccttgggccagttccct
tgctcttttgttcaaatgaaccctggtgtgccattatttaatcctccagtagggcagtta
catccattgggctctcaaatgaatcccactatgcctgcagtgattccccaccagttctac
aacccaaatcccccgttcattttccccaactctccatcaatgccagcaggaaatgccaac
actacactacatggacagtctcgttccagcacaccccattccaccgggcaacaggctggc
gagagagaaggggccgaatctcctctttttcagtctcgatgctcctccccactcaatctt
ctacaacttgaggaattgccaagcaacagaacagatgctacgctacagactccaccccca
ggattaggagcaacacaagtgggcgggactgttttgcaaaatcgcagcaacaccaaagat
gccaaaccagataacagccatgaagtcaatgagtcaaaccaggactccatgtcaacctcc
agtgacatgctggacctactactgcaagaggactcccgctcaggaactggatccgccgcc
tcaggttctgggtcttcagggtctggatctgggtctgggtctgggtcatttggctctgga
tcaaatgggtgtagcacatctggaagtggcactaggagcagtaatacaagcaagtacttt
ggaagcattgactcgtcagagaatgatcacactcataaaccagcatctggggatctggga
ggggaaccgttcataaatattgtcctgcaggaccccatctggctcctcatggccaacaca
gatgacaaggttatgatgacataccagattcccatcaaagacagagactcagtactgaaa
gaagacagaaacgccctgaaagatgttcaggagcatcagcctcactttactgaagagcag
aagaaagagttaactcaggttcacccctggattcaaacgggctgtctaccaaaagccatc
aacattacatcttgcacaggatgtgcaacttctccagatttcttgactcctccattcgat
ttggaatttcatgagatggatctcagcatgatttttaaagaagaggccaaacaacaagat
aaacttatcactgcagaaatagcctttcccttgagccccccttcatctgattatgaacag
atagacaatcaggccagcacgagtaccgtaggagtgggccatggaggaggtggaagtgac
ataatcagcgaaagtgaagagggactacagactgctggacagtga

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