Pimephales promelas (fathead minnow): 120482098
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Entry
120482098 CDS
T08155
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120482098 (med13a)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
120482098 (med13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
120482098
NCBI-ProteinID:
XP_039532016
LinkDB
All DBs
Position
Unknown
AA seq
2155 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFYLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILCSFSRC
LKADVLSVWRRSQRQGRRELWLFWWGDDPNFSDLIHHELTGEDDGVWESGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKREHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYHLSEEHLTLAQQASSPFQVILSPFGLNGTLTGQSFKLSDPPTQKLIEEWNQFY
PISPTSKESAEDKMEDIDWEDDSLAAVEVLVGGVRMVYPACLVLVPQSDIPITVTPTGSS
HCTAVYSNGHQVPASNRDPAISSVTLTPPTSPEEAQTVHSHSAQKWMRLPMAMDGFSVDS
TSHHGGKIPRRMASQVVEGVWQECNINRAQNKRKFSATASNGTSEEETLMKVGAWDFVDS
TQRSNCNCSRHKTLKQRGGSTPGQPPSAGQTQQPPIKHKAGEKPEKGDKQQKRPQTPFHH
RNSVCEDVPMETDTSAGQRLALRGQEGGRFPGLRPSDVSTGSKPPQLHSGGGATVGNSGP
TEMVGSPQPPPLSPHPCERGEEASDAIKNPSTPHSQHFYPPSAEPCLQKGPDDARLDPLT
QPFPPTYSEPLEPTPYISAAVNLDDDGSHAPWRFFNLPRRKDAEFPTPSLPGDKLREEVL
LGAEGIMSATESMVASKRPLKVSDERLQMYLQRQNQHLAAAITGNDHEPDVDPYAFVDGD
VKFTFSDKKDKAGGDREPGKKHKGEDGSAGLSDDAQRAAANNRATSTSLIHDSDLAVSIK
DLDNLFNSDEDEQTPGARRAVNGADEKFGSKESKPATLDPVSCISTADLHQMFPTPPSLE
QHIMGYSPMNMGSKDGCMEPGSGLNTLDGSTVLGGQFKIEVEESFCSPKPSEIKDFSFVY
KPEFCQPFVGCSMFAPLKSLPSQCLPPIKLPDECVYRPSWTVGKLELLNSVPAMSHFSKD
GENNAMEQDYIQTYTPTQTHTPFLSNSAPPSNSGTNILPSPATPRFSAPTPRTPRTPRTP
RGPASVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSESVMNL
FKDCNFDSCCICVCNMNIKGADVGIYISDPNMEAQYPCGCGFSAVVNRRYGNGSGLFLED
ELDIIGRGSDVSQEAEKRFEVLRSMSLEKTGGGGKDRVPDELISLLQDQCTNPFSPILAL
DLEGLSSQGTGGATVPPCVRVEERDFHNDCYMALEHGRQFMDNMSGGKVDETLVKSTCLH
HWAKRSAVDVSGLCSQDVLRVLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKMAGRG
SYGTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWEKLLLDPFGSQRDLGYLVLCPDSDA
LLTGAKSFFRELTAVYESCKLGQHRPISKVYADGIVRVGGAAAKKHSEQPVNDWFLKAAG
GSSDAFAKLKLFAQVCRHDLAPYLATQLLDSSLLIQPNLIPSSSQSTSSQSSSNLQTSMA
SGGSTLNNNNNAASNSGSGLSGNTNNTTTSSSGPQGSSIQSAKPSSFPPYGSMGVQGNSS
QSGALGQQAVTQNSSLSGDNSAVNSQTQGPSEPPESTMEREKVGVPTDGESHAITYPPAI
MIYVVDPFSYEEAEPGSSQSSMWTMGLLRCYLEMLQVLPAHIRNSVFVQIVPCQYLLQPV
RSEERHLYAQHLKSLAFSVFTQCRRPLPTSTNVKSLTGFGPGLALDTSLRNPDRPECLRL
YTPPFILAPTKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLATCTDLYGELLETCI
ISIDVPNRARRKKGSARKLGLQKLWEWCLGLVQMTSLPWRVVIGRLGRIGHGELRDWSIL
LSRRNLQSVSRRLKENCRLCGISAADTPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRS
TTLNMQTSQLSTPQDTSCTHILVFPTSAFVQVNSSNYPHENIDLAFNGGNDGSDPIGGIF
DLLEQEGNDLVDPDIINILPASPTTSPVHSPGSQYPHGGDGSKGQSTDRMESHEEAPNIL
QQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVSSVQSDELLHSKHSH
PLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQMYNFIMTML
NT seq
6468 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgtttcgtaccgaacggggccagcttggaggactgccattccaatctattc
tatctggctgacttgacggggataaaatggaagaggtatgtgtggcaaggtccgacctct
gcgcccattctgttcccggtcacggaggaggaccccatcctctgcagcttcagccgctgt
ctaaaggcagatgtgctgagcgtgtggaggcggagccagaggcagggacgcagggagctc
tggctcttctggtggggtgacgatcccaacttctctgatctcatccaccacgaactcaca
ggagaggatgacggcgtgtgggagagcggtctgtcctacgaatgtcgaactcttctcttc
aaggccattcacaacctgctggagcgctgtctgatgaaccgcagtttcgtacgcattgga
aaatggttcgttaaaccctacgaaaaggatgagaagcccataaacaagagagaacacctg
tcttgctccttcacgttcttcctgcatggagacagtaatgtgtgcaccagtgtggagatc
aaccagcaccagcccgtataccacctgagtgaggagcacctgacattggcccagcaggcc
tccagccctttccaagtgattctgagtccatttggactgaacgggacattgaccggccag
tccttcaagctgtctgaccctccgacacagaagctcattgaagaatggaaccagttctat
cccatcagcccgacctccaaggagagcgcagaggacaaaatggaggacatcgactgggag
gacgactccctggcagcagtggaagtgcttgttggtggtgtgcgcatggtgtatcctgca
tgcctagtgttagtcccacagtcagacatcccgatcactgtaacgcctacggggtcgtcg
cactgcactgccgtctattcaaatgggcaccaagtgcctgcttcaaaccgtgaccctgcc
atctcttcagtgactctgactcctcccacctcaccagaggaagctcagacagttcactct
cactcggcacagaagtggatgcggttgccgatggcaatggatggattcagtgttgatagc
accagtcaccatggtggcaagattccacgcaggatggccagtcaggtggttgagggcgtc
tggcaagagtgcaacatcaaccgagctcagaacaaacggaaattctccgccacggcctcc
aatgggaccagcgaggaggagacgttgatgaaagtgggcgcctgggactttgttgactcc
acacagagatcaaactgcaactgttcaaggcacaaaacattgaagcagagaggaggcagc
acgcctggtcagccgcccagtgccggtcagacgcagcagccgcccatcaagcacaaagcc
ggagagaagcccgaaaagggagacaagcagcagaaacgcccgcagacacccttccaccac
cgcaactcagtctgcgaagatgttcccatggaaactgacacttctgcaggccagcgcttg
gctcttagaggtcaagagggtggacgatttcctgggctccgcccatctgatgtgagcact
ggctcgaaaccgccacagctacacagcgggggcggagctaccgtgggcaacagtggcccg
acggagatggtcggttcccctcagccacccccgcttagccctcacccctgcgaacgtggc
gaggaagcctcagacgccattaaaaacccctccaccccacacagccaacatttttaccct
ccttctgcagaaccatgcctccagaagggcccagatgacgcccgtttggatcccctcacc
caaccttttccccctacatactccgagcccttggagcctaccccgtacatcagtgcagca
gtaaacctggatgacgacgggagtcatgcgccgtggagattcttcaacctgccacgtagg
aaagatgcagagtttcccacgccatcgctaccaggagacaaactcagagaagaggtgtta
ctcggagctgaaggaattatgtctgctactgagtcaatggttgcctccaaaaggccgctc
aaggtctcagatgaacgtctccaaatgtacctgcagcgacagaatcagcacctggctgca
gccattacaggcaacgaccatgagcccgatgtcgacccatacgcttttgtcgacggagac
gttaagttcaccttctcggataagaaagacaaagcagggggagatagagaaccggggaag
aaacacaagggagaagatggcagtgctggtctatcagatgatgctcagcgggctgcggcc
aataaccgggccacttccaccagcctcatacatgattcagacctggcagtctccatcaaa
gacctggacaacctcttcaactccgatgaggatgaacaaacacctggagcacggagagct
gtaaatggagcagatgagaagtttggcagcaaggagtcgaaaccagccacactggaccct
gtctcctgtataagcacggctgatctacaccagatgttccctacgcctccgtcactagag
cagcacatcatgggttactcccccatgaacatgggcagtaaagatggctgtatggagcct
ggctctggcctcaacactctggacggctctactgttctgggtggccagtttaaaatcgag
gtggaagagagtttctgcagccccaaaccttctgaaatcaaggacttctcctttgtgtac
aagcctgagttttgtcaaccatttgtaggctgctccatgtttgcccccctgaagtctttg
cctagtcagtgcctgccccctatcaaactgcctgatgagtgtgtttacaggcccagctgg
actgtgggaaaactggagctactcaactctgtacctgctatgtcccatttcagcaaggat
ggtgaaaacaatgctatggagcaagactacatccagacgtatacacccactcaaacccac
acgccattcttgtctaacagtgccccgcccagcaacagtggcacaaacatcctcccgtcc
cctgccactcctcgtttctcagctcctacccctcgtaccccacggacaccccggacgccc
agaggcccagccagcgtacaaggttccctcaaatacgagaactcggacctgtactcgcca
gcctcaacaccctccacctgcaggccgctcaactctgtggaacctgcgacggttccctcc
atcccagaagcccacagcctatacgtcaacctcatcctgtcggagtctgtcatgaacctg
ttcaaggactgcaacttcgacagctgctgcatctgcgtatgcaacatgaacatcaaaggc
gccgacgtgggcatctacatcagcgaccccaacatggaggcccagtatccctgtgggtgc
ggcttcagtgcggttgtcaaccggcgctacggtaatggctccggcctcttcctggaagac
gagctggatatcatcggacggggttcagatgtgagccaggaggcggagaagcgctttgag
gtgttacggagcatgtcgctggagaagacagggggtggaggcaaggatcgagtcccggac
gagcttatctctctcctgcaggatcagtgcactaatcccttttcccccatcctggcattg
gacctcgagggattgtcttctcaagggacagggggcgccactgtaccaccatgtgtgcgc
gtagaggagagggactttcacaacgactgttacatggctctagaacacgggcggcagttc
atggacaacatgtccggtgggaaggttgacgagactctggtgaagagcacgtgtttacac
cattgggccaaacgcagcgcggtggatgtgagtgggctgtgctctcaagatgtgttgaga
gtacttctctctctccagcctgttctccaggatgccatccagaaaaagaggaccgttcgc
tcttggggagtccaggggcctctcacatggcagcagtttcacaagatggctggaagaggg
tcttacggcacggatgaatctccggagcctctgcctattcctaccttcctggttgggtat
gagtatgactttgtggtgctctctccctttggcctgccgtactgggagaagctactgctt
gatccctttggctcacaaagagacttaggatatctggtcctttgcccggacagcgatgct
ctcctcaccggagcaaagagcttcttcagagagttgacagcagtctacgagtcttgtaag
ctcggtcagcatcgaccaatctccaaagtgtatgctgatggcattgttagggtaggtgga
gctgctgccaagaagcactcagaacagccagtcaacgattggttcctgaaagcggctggt
ggcagcagtgatgcatttgccaagctcaagctgtttgcccaagtctgcagacatgacctc
gctccatacctcgctacacagctattggacagctccctcctcattcagccaaaccttatc
ccttcttcctcccaatcaacttcctcgcaatcctcatccaacttacaaacctcaatggcc
tccggaggctccaccctcaataacaacaacaacgctgccagcaacagtggctcaggcctg
tcaggcaacaccaacaacaccaccacctcctcctcaggccctcagggcagcagcatccag
tctgccaagcccagctcgttccctccctatggaagcatgggagtccaaggtaacagctcc
cagtctggggctctgggccagcaggctgtcacccagaactcgagcctctctggagacaat
tcagccgtcaacagccagactcaggggccatctgaaccaccagagagcactatggagaga
gaaaaggtcggagttcccacagacggcgagtcccacgccatcacgtatccacctgccatc
atgatttatgttgtggaccccttctcatatgaggaggcggagccagggtcgtcacaatca
agcatgtggacgatgggactcctccgctgctacctggagatgctgcaggtcctaccagct
catatacgcaactctgtgtttgtacagattgtcccctgtcagtacctgcttcaacctgtg
aggagtgaggagaggcacctctacgcccaacacctcaagtctctagccttctctgtcttc
acccagtgcagaagacccctcccaacctccaccaatgtgaagtcactgacgggttttggc
cccggccttgcccttgacacctccctcaggaacccagatagaccagagtgtctgcgattg
tacacgccacctttcatcctggccccaacgaaagacaagcaaacggagttgggtgagact
ttcggagaggcgtctcagaagtataacgtcctttttgtgggctactgcctgtcacatgat
caaagatggctgttggccacctgcacggacctgtacggagagctgctggaaacctgtatc
atcagcatagacgtacccaacagagcaagaaggaaaaagggatctgcccggaagctgggc
ctacagaagctttgggagtggtgtctgggtttggttcagatgacatcattaccatggaga
gtggtgattggccgacttggacgaataggacatggagagttgcgagactggagtatttta
ctgagtcgaaggaatctgcagtcagtgtctcggaggcttaaggagaactgtaggctgtgt
gggatctcagcagctgacactcccagcatccttagcgcctgcttagttgccatggaaccc
cagggctcatttgtcatcatgccagactctgtgtcaacaggttcggtgtttggtcgaagt
acaactctgaacatgcagacgtcccagctgagcaccccgcaggacacgtcttgcacacac
atcctggtgttccccacctctgcatttgtgcaagtcaacagctccaactacccgcacgaa
aacattgaccttgccttcaacggtggcaatgatggctcggatccaatcggtggcatcttt
gacctcctggagcaggaaggtaacgacctggtcgatcctgacatcattaacatcctccct
gcctcacccaccacgtcaccagttcactcacctggatcccagtacccccatggaggagat
gggagcaagggtcaaagtacagatcgtatggagtctcacgaagaagctcccaatatcctc
cagcagccgttagctctgggctattttgtgtccacagctaaagcaggtccactgcctgac
tggttctggtctgcatgtcctcaggcacagaaccagtgtccccttttcttaaaggcctct
ctacacctccatgtgtcttcagtgcaatcagatgaacttttgcacagcaaacactctcac
ccgctggactccaatcagacctctgatgttctcagatttgtgttggagcagtacaacgcc
ctttcctggctgacctgtgaccctgcgacccaggaccgccgctcttgcctgcccatccat
tttgtggtgctcaatcaaatgtacaacttcatcatgaccatgttgtaa
DBGET
integrated database retrieval system
