KEGG   Pimephales promelas (fathead minnow): 120482151
Entry
120482151         CDS       T08155                                 
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120482151 (exosc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprm03019]
    120482151 (exosc8)
Messenger RNA biogenesis [BR:pprm03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     120482151 (exosc8)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C DNA_pol3_a_NI
Other DBs
NCBI-GeneID: 120482151
NCBI-ProteinID: XP_039532123
LinkDB
Position
Unknown
AA seq 277 aa
MAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNISSITTADGSAMVKIGNTTVIC
GIKAELTTPPSDAPNKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSDLIN
MEELCIEKAKLCWVLYCDIMCLDYDGNLLDACIIVLLAALKNAQLPEVTVNKETDLAEVD
IRKKRHLKISRHPVGSSFAVFDDSIIIVDPTAEEESLSTALMTVVTDEEDRLCAVHKPGG
TSLSGEKLQHCINRAITRNKEISKLVDKVIGSMKTTK
NT seq 834 nt   +upstreamnt  +downstreamnt
atggcggctggtttcaaaaccgcagagcctcttgaatatcacaggagctttttgaaagaa
aactgtcgtccagatggaagagaattgggagagtttagacccacaaccttaaatattagc
tccataactacagccgatggatcagcaatggtgaagattggaaacaccacagtaatctgt
gggataaaagctgaattaactacgccaccctctgatgctccaaataaaggatatatagtc
ccaaatgtagatctgcctccactgtgctcgtctagattcagacccggaccaccaggagaa
caggctcaggccgccagccaatttatcgcagacgtcattgagagttcagatttaataaat
atggaggaattgtgcattgaaaaagctaagctttgttgggtgctgtactgtgatatcatg
tgtttggattacgatgggaacttacttgacgcctgcatcatagttttgctggcagcttta
aagaacgcccaacttcctgaagtcactgtaaacaaagagacagatttagcagaagtcgac
atccggaagaagagacacttgaagatcagccggcacccagttggctcatcgtttgcagta
tttgatgattccatcatcatcgtcgaccccacggcggaagaggaaagcttgtctacagca
ttaatgactgtggtaacagacgaggaggatcgactctgtgccgtccacaaaccaggtggg
acgtcgttatccggtgagaagctacaacactgcatcaatcgagccataacgagaaacaaa
gagatcagcaaactagtggacaaagtcatcgggagcatgaagacgacgaaataa

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