Pimephales promelas (fathead minnow): 120482156
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Entry
120482156 CDS
T08155
Symbol
ubtfl
Name
(RefSeq) upstream binding transcription factor, like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120482156 (ubtfl)
03021 Transcription machinery [BR:
pprm03021
]
120482156 (ubtfl)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
120482156 (ubtfl)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
120482156 (ubtfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
DUF4872
Motif
Other DBs
NCBI-GeneID:
120482156
NCBI-ProteinID:
XP_039532136
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MNGSTSVSGTQAGRIKIESNADTWSKEDCMTLLERIRSLLPDGDTMKYKTTESHFDWEKV
GFGAFTGDMCKQKWQKVSTEVRKYRTMTELIVDAIEYVKNPYKGKKLKTHPDFPKKPLTP
YFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPEKKKLKYIQEFQREKESFEKNMAR
FKEDHPDLIEERKKSDLPEKPKTPQQLWYNHEKKAYMKIHPEVSQKELKEVLRRQWSQLP
DKKRLKWISKALELQKHYEESMRVYFEAHPDANSDEHVKSVLTKAERQLKDKFDGRPTKP
PPNGYSLYCAELMVNMKDVPSTERMVLCSKQWKMMTQKEKDMFQKRCEQKKKQYEIDLQR
FIESLPEEERERVCGEEKLGGKLSIGGAGSPLRAKSPCVKERCRDPELDQWGHGLSKEKR
DNKNKKTRLPETPKTPEEMWQQSVIGDYLAKYRNDRKKAQNAMDAAWKAMEKKEKIPWIK
KAAEDQKRYEVQYRTVRELLEMRTVLSGQGQRKPKFDGEPKKPPVSGYQMFSQELLTNGE
LNHFSLKERMVEIGKRWHKLSQSQKDKYKKQVEEQQLEYKAELEAWVKSLSPQERAVYKE
FSTTKRRSTTKARGPGAKVRVTKAKAVGARPVTVGPGGGKRSMAYRAKQDTSDSDDDDDK
TDTSDSEDDDDESSGSTDSDDDDEDDENEDDDDDDDRSDGSSSSSSEDSSDSDSD
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcagcaccagtgtgtctggcacccaggcaggacgaatcaaaattgagtcaaat
gcagatacatggagcaaagaagactgcatgacactgctggagaggatacgcagtctgtta
cctgatggagacacaatgaagtataaaaccacagagtctcattttgactgggagaaggtg
gggtttggggctttcactggagacatgtgtaagcagaaatggcagaaagtttccacagag
gtacgtaaatacagaacgatgacagagctcattgttgatgctattgaatatgtgaagaac
ccttataaggggaaaaaattgaagacacatccagacttcccaaagaaaccccttactccc
tactttcgcttctttatggagaagcgagccaagtatgcaaaaatccaccccgagatgagc
aacttggatctcaccaagattctgtccaaaaaatacaaagagcttcctgaaaagaaaaag
ctcaagtacattcaagaattccagagagagaaagagtcttttgagaagaacatggcacgg
ttcaaggaggaccacccagatttaatagaggagagaaagaagtcagacctcccagagaag
cccaagacccctcagcagctatggtacaaccatgagaagaaagcctacatgaaaattcac
ccagaggtaagccagaaggagctgaaggaagtattacgtagacagtggtcccaattaccc
gacaaaaagaggctgaaatggataagcaaagctctagagctgcagaaacactacgaggaa
agcatgagagtatattttgaagctcatccagatgcaaactctgatgagcacgtcaagtct
gtcttaaccaaggctgaacggcagctcaaggacaagtttgatggccggccaaccaaacca
ccaccaaatggctattcgctgtactgtgctgaactaatggtaaacatgaaggacgtgcca
agcacggagcgaatggtgctatgcagtaagcagtggaagatgatgacccagaaagagaag
gacatgttccagaaacgatgtgaacagaaaaagaaacagtatgagattgaccttcagagg
tttattgagagtctcccagaagaggagagggagcgtgtgtgtggagaggagaagctggga
ggaaagctgagcatagggggtgcaggcagccccctgagggccaaatccccatgtgtgaag
gaacggtgtcgtgaccccgagctggatcaatgggggcatggcctttcaaaagagaagcga
gacaataagaataagaaaacacggctccctgaaacaccgaagactccagaggagatgtgg
cagcagagcgtgataggagactatctggctaaatacagaaatgaccggaagaaagcgcaa
aatgcaatggatgctgcttggaaggccatggaaaagaaggagaagattccttggatcaag
aaggctgcagaggaccagaagagatacgaggttcagtaccggaccgtgagggagctttta
gagatgaggacagttctgtcaggacagggacaaagaaaaccaaaatttgatggcgagcct
aagaagcccccggtgagtgggtatcaaatgttctctcaggaactcctaactaacggtgag
ctgaatcacttcagcctgaaagagcgcatggtggagatcggcaagcgatggcacaagctt
agtcagagccagaaagacaaatataaaaaacaggtggaggaacaacagctagagtacaaa
gctgagcttgaggcttgggtaaagtcactgtcccctcaggagcgtgcggtttataaagag
ttctccactacgaaacggcgaagcacgacaaaagcacggggtcctggggcgaaagtccga
gtcaccaaagcgaaggcggtaggtgccagacccgtgacggtgggtcctggggggggcaag
cgttccatggcgtaccgggccaagcaggacacgtcggactccgatgacgatgatgacaaa
acagacacctcagactcagaggatgacgatgatgagtcatctggcagcactgatagtgat
gacgatgatgaagatgatgagaatgaagatgacgacgatgatgatgaccggtcggacggc
tccagcagttcatcatcagaagatagtagtgactctgattcagactaa
DBGET
integrated database retrieval system
