Pimephales promelas (fathead minnow): 120482157
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Entry
120482157 CDS
T08155
Name
(RefSeq) LIM/homeobox protein Lhx8 isoform X1
KO
K09375
LIM homeobox protein 6/8
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120482157
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
120482157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
DNA_repr_REX1B
TRASH_HVO_1752_C
HTH_72
Motif
Other DBs
NCBI-GeneID:
120482157
NCBI-ProteinID:
XP_039532141
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MGKRRLGDVYGMERLHLKAVSMGTSEIRRAFTTVMSTGRSEDFTNKCREVTSDVCMISSE
LVNDRLDPASPSALPQAMASDAFQGKVVCTGCRDDILDRYLLKVNDLCWHVRCLSCSLCQ
TTLSGNTTCYVRGREVFCKLDYFRRYRTWCSCCGETVQSSDWVHRAKGNVYHLACFSCFS
CKRQLSTGEEFALVGQKLLCRIHYDSMLDKLKGSSEKGCEINQKLSKRARTSFTSDQLRV
MQAQFAQDNNPDAQTLQRLAEQTGLSRRVIQVWFQNCRARQKKNISPSHSGITAGGLSSL
RVVPNLNELIYTNTSTLTALHSICIDVHTPTSLLYQPLLSQQLLTSSS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggggaagagaagattgggtgatgtttatgggatggagcgcttacatttaaaggctgtt
tcgatggggacttcggaaatccggagagcattcaccacagtcatgtctacgggtcgcagt
gaggattttaccaacaagtgcagagaagttacaagtgacgtttgcatgatttcatcagaa
cttgtgaatgaccgattagatcctgcttctccgtctgctttaccccaagcaatggcttct
gatgcttttcaaggcaaagtagtttgcacggggtgtagagatgacatcctagacaggtat
ctacttaaggtaaatgacttgtgctggcatgtgcgatgcctttcatgcagtttatgccaa
accactctcagcggaaacacaacctgctatgttagagggcgagaggtcttctgcaaacta
gattacttcagaaggtatcggacatggtgctcgtgctgtggggaaacagttcaatcttcg
gactgggtacacagggcgaagggaaacgtttaccacctggcatgcttctcgtgcttctcc
tgtaagaggcagctgtccacaggcgaggagtttgcattggttgggcaaaaattgttgtgt
cgaattcattacgacagcatgctggacaaactcaaagggtcctctgaaaaaggttgtgaa
ataaaccaaaagctgtcaaaaagagcacgtaccagtttcacttccgaccagctacgggtt
atgcaggctcagtttgctcaggacaataacccagacgcacagacacttcagaggcttgct
gaacagactgggcttagtcgacgcgtcattcaggtctggtttcaaaactgtcgtgcccgt
cagaagaagaacatctctccctctcattcaggaataacggcaggaggtctgtcgtcactc
cgggtggttcccaacctaaatgaactgatttatacaaacacatccacgcttacagcctta
cacagcatctgcatcgatgttcacacaccaacatctctactctatcagccattactgtcc
caacaactactgaccagcagcagctaa
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