Pimephales promelas (fathead minnow): 120482170
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Entry
120482170 CDS
T08155
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120482170 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120482170 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120482170 (vps36)
Membrane trafficking [BR:
pprm04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
120482170 (vps36)
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120482170 (vps36)
Exosomal proteins of colorectal cancer cells
120482170 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
MA3
Laminin_II
Flu_M1_C
Motif
Other DBs
NCBI-GeneID:
120482170
NCBI-ProteinID:
XP_039532171
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MDRFVWTNGLLEMNETLVIQQRGVRLYDGEDKAKLDVGAILLSTHRLLWRDQKSHECCIC
IPLSQVIYFEEQAAGIGKSAKIVIHLYPSPENKEPGPYQQSKYSYIKLSFKEHGQIEFYR
RLTEEMTQKRWENTPVSQPIPTVTGPKAGRTRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTQ
YHIQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKVFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSEKGSLTAEEFAKLLGLSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacagatttgtttggacaaatgggctccttgagatgaacgaaacgttagtaatccaa
caaagaggagtgagactttacgacggggaagacaaggctaaacttgatgttggagccatt
cttctcagtacccatcgcctgctctggagagaccagaagagtcatgaatgctgcatatgc
atacccctgtcacaggtcatatactttgaggagcaagcagcaggcatcggaaagagtgcc
aagattgttattcacctttatccatcccctgaaaataaggagccaggcccctaccagcag
agcaagtactcttatataaagctgtccttcaaggaacatgggcagattgagttttacaga
cgtctaacagaagagatgactcagaagcgatgggagaatacacccgtctcacagccgatc
cccacagtaacaggacccaaggcaggaaggacacgcgcagtgggcattgtgggtattgaa
cggaagttggaggagaaaagaaaagagacggataaaaacatttctgaggcctttgaggat
ctcagtaaactaatggaaaaggcaaaagagatggtggagctctccagatccattgccaac
aaaatcaaagacaaacagggtgacatcacagaagatgagaccatccgtttcaagtcttat
ttgctgagtatgggtatagccaacccagtgaccagagagacgcacggctctggcacgcag
taccacatccaactcgccaaacagctgggagacatgctgcaagccccactggaggagcgt
ggaggaatgatggccctcactgaagtgtactgtctggtgaacagagcccgtgggatggag
cttctctctccagaggacttggtcaatgcctgcaaggtgtttgagtcactaaaacttcct
ctacggttgagagtatttgacagcggggtgatggttgttcaactccagtcccacagtgaa
gaggaaatgattgcctcagctctagataacgtgtctgagaaaggctccctcactgctgaa
gagtttgccaagctgttgggactgtcagttctccttgcgaaagaaaggttgttattagct
gaaaaaatgggtcacttgtgccgagacgattcagtagaaggtctgcgattttatcccaac
ctgttctga
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