Pimephales promelas (fathead minnow): 120482244
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Entry
120482244 CDS
T08155
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120482244 (ttc28)
Cilium and associated proteins [BR:
pprm03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
120482244 (ttc28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TTC28_C
CFAP70_TPR_C
TPR_MalT
TPR_16
RPN7
TPR_SusR
TPR_11
TPR_17
TPR_14
DUF6340
TPR_BSK1_C
TPR_9
TPR_19
TPR_NPHP3
TPR_6
PUB
TPR_YpiA_C
Motif
Other DBs
NCBI-GeneID:
120482244
NCBI-ProteinID:
XP_039532280
LinkDB
All DBs
Position
Unknown
AA seq
2450 aa
AA seq
DB search
MEKQGARREKFGLFGPRALGRAVHAASEGPGLTKAEFMEKVRQSNESCQLGDFQTAVKLY
GEALRADPQNCILYSNRSAAHLKLGQYQTALDDAVKARLLNPKWPKAYFRQGVALQYLGR
HADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFVVVSV
IGQELLTGSHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWSLGNTEKSTAYMQQDL
EVAKTLGDQTGECRAHGNLGSAFFSKGNYREALSNHRHQLVLAMKLKDREAASSALSSLG
HVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFENAVQCHEQHL
SIAKSLGNKREEARAYSNLGSAYHYRRNFDKAMSYHTHVLELAQELEEKSIEMRAYAGLG
HAARCMQDLERAKKYHEQQLGIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLHKVHL
SIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTHGNLA
VAYQALGAHDRALQHYQNHLNIARELRDIQSEARALGNLGNFHCSRGEFPQAVPYYEQYL
RLSPDLQDMESEGKVCHNLGYAHYCLGNFQEAVKYYEQDLALAKDLHDKLSQAKAYCNLG
LAFKALGDYSKAEECQKYLLSLAQSLNNSQARFRALGNLGDIFLCKKDVPGAVKFYEQQL
SLAHQVKDRKMEANAYAALGAAYRMLQKFDKSLGYHTQELEVYQEQGDIQGECQAHGHLA
AVYMSLGKYTMAFKCYEEQLELGQRLKDPSVEAQVYGNMGITKMNMGVMEEAIGYFEQQL
AMLQQLSGNEAVLDRGRAYGNLGDCYDSLGDFEEAIKYYDQYLSVAQSLSHMQDQEKAYR
GLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGSLHSQLGNYEQAISCLE
RQLAIARDTHDRLLEGDASCGLGAVYQLMGEHDTALQFHQLDLQIAEETGSSGCQARAYG
NLGLTYESLGNFERAVVYQEQHLSVAAQTNDLVAKTLAYSSLGRTHHALQNYSQSVMYLQ
EGLRLAEQLGRREDEAKIRHRLGLSLWASGNLEESQHQLYRASALFETIRHEAQHSTDYK
LSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYTPVT
VEHILDTVNGQRALVLYFSLAAGYLYSWLLAPGSGILKFHEVYLGEGASEDFQEAGGGVM
PSSLEQHIANAREALGVDSYYSRACSSSETESEAGDLLDQQFEELNNKLNSVTDPTGFLR
MVSRNNLFNRSCQSMTSLFSNTVSPVKEGTSPLPRRPSALSKPPLRALYDLLIAPMEGGL
MHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIGSLGTTAKVH
PRRTGPVLCNGGSSMAAVVGNPRLPPSVMDRWLWGPMPSAEEEAHMVADQLGCQPLAGPA
ATKERVMSALTQAECAHFATHISWKLAALVLTPSQDSGSGASATGASGGGAGAGESAVKS
NYTIPESLRVPDDASDAESICDSPPLQEFLLTAADILDLRLPTKLVVLGSYQESDSKVTA
DGVVGLTRAFLAAGAQCVLVSLWPVPVAASKMFIHSFYSALLNGTKASAALADAMKTVQS
SKQFSHPSNWAGFMLIGCDVKLNSPSSLIGQALAEILQYPDKARDALRVLLHLVEKSLQR
IQNGQRNSMYTSQQSVENKVCGVPGWQALLTAVGFRLDSAGTGLPAAVFFPTADPGDRLQ
QCSTTLQSLLGLPPPALQALCKLITASETGEQLINRAVKNVVGMLHQVLVQLQSGEKEQD
FSLAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQANRRTMHFALQSLL
ALFDSTELPKRLSLDSSSSLESLASAQSVSHQLPMGFPNPPFSPPCPDSLASDAISVYSL
SSIASSMSFLSRPEGASEFISQRSRQQELERHRGGAGIFASHRHTAVPRSRSSPHGAVGG
HEDEEYEGYSIISSEPLGSQCDTLPRPANHRNHRGAARGGAGRGYAVSVSSRGSVSTPTS
PVKTTLVPSPNSPFQKVGKVSSSDTGESDQSSTETDSTVKSQEERTSGAPLDPQELAQKI
LEETQSHMRAVETLQRSVPLGDGMSSGGPPTPTGGSAFRSSETSAFSRPSSRASIKAQSS
PLPTRPKPPSRTSSLQKISSGYNSPATSETSLKEGSQPSPTSEQFKLKYPSSPYSGHISR
SPSNVSPSSGHQSPAGSAPSPALSYSSTGSTRSSPADAPDIDRLKLAAIDEKVQAIHNLK
TFWANATQQQHSGPMRVLRGGKLSTAKRDVLGLLNLSPRHGVTGQDSAGQDVALEHRNPP
NGHRKIDPKRVAPSPTASTGSSPGSHSIRLPTGNGYKFLSPGRFFPSSKC
NT seq
7353 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaaggagcaagacgcgaaaagtttggtctgtttggaccccgtgcactgggc
agggccgttcacgcggcatccgagggcccgggactcaccaaggcagagttcatggagaag
gttcggcaaagcaacgagtcctgccagctgggagacttccagacggccgtgaagctgtac
ggcgaagctctgcgtgccgatccacagaactgcatcctttacagcaaccgctcagccgcc
cacctcaaactgggccagtatcagaccgccctggacgacgccgtcaaagcccgcctcctc
aaccctaagtggccgaaggcatacttccgacagggtgttgcccttcagtacctgggccgc
catgcggacgccctggccgccttcgcctcgggactggcccaggaccccaagagcctgcag
ctgctggtgggaatggtggaggccgccatgaagtccccgctgagagaatcgctggagccc
acgtaccagcagctgcagaagatgaagctggacaagagcccgtttgtggtggtgtcggtg
atcgggcaagagcttctgaccggctctcatcacggggcctcagtggtggttctggaggcg
gcgctgaagatcggcacctgcagcctcaagctgcgcggctccgtgttctcggccctcagc
agcgcgtactggtccctgggcaacacggagaagagcaccgcgtacatgcagcaggacctg
gaggtggccaaaactttaggtgaccagacgggcgaatgtcgcgctcacgggaacctgggg
tcggccttcttctccaaggggaattaccgtgaggccttgagcaaccacagacaccagctc
gtcctggccatgaagctcaaggacagagaggcggcgtcttcagccctcagcagtttgggt
cacgtctacacggccatcggcgactatcccaacgcccttgcgagccacaagcagtgtgtc
ctgctggccaaacagtccaaggaccagctgtccgaggcccgtgagctgggcaacatggga
gccgtgtacatcgccatgggtgacttcgagaacgccgtgcagtgccacgaacagcacctg
agcatcgccaagagcctcggaaacaagcgcgaggaggcgcgcgcctacagcaacctgggc
agcgcttaccactaccggcgtaacttcgacaaggccatgtcctaccacacacacgtgctg
gagctcgctcaggagctggaggagaagagcatcgagatgagggcgtacgcaggcctggga
cacgctgcccggtgcatgcaggacctggagcgagccaagaagtaccacgagcagcagctc
ggcatcgctgaaggcctgaaggaccgcgccgccgagggcagggcttcgtccaatctggga
atcatccaccagatgaaaggggactacgagactgctctgaagctgcataaggttcatcta
tccatcgctcaggagctaaacgactacgccgcccagggcagagcgtacgggaacatggga
aacgcgtacaacgccctcggcgccttcgaccaggccgtgcgctaccaccgacaagagctg
cagatttccatggaggttaatgatcgtgcatcgcaggcttcgacacacgggaacctggcg
gtggcgtaccaggctttaggggctcacgatcgagctctgcaacattaccagaatcacctg
aacatcgctcgagagttaagggacatccagagcgaagctcgagccttgggcaacctgggg
aatttccactgctcacggggagagttcccccaagccgtaccttactacgagcaataccta
cggctttccccggacttgcaggacatggagagcgagggtaaggtctgtcacaacttggga
tatgcgcactactgtctgggcaacttccaggaggcggtgaagtattacgaacaagacctg
gcacttgccaaggacctccacgacaagctaagccaagccaaagcctactgcaatctcggc
ctggctttcaaagctcttggcgactacagcaaggcagaggagtgccagaagtaccttctt
tccttggcgcagtcgctgaacaactcgcaagctcgatttcgcgccttgggcaacctgggc
gacatcttcctctgcaagaaggacgttcccggagccgtcaagttttacgagcagcagttg
tccttggcgcatcaggtcaaggaccgcaagatggaagccaacgcctacgcagcgctggga
gccgcctatcggatgctacagaagttcgacaagtccttaggctatcacacccaggagctg
gaggtgtatcaagagcagggagacatccagggagagtgccaggctcacggacacctcgcc
gccgtctacatgtcactggggaagtacaccatggccttcaaatgctacgaggaacagctc
gagctcgggcagcgactcaaggaccccagcgtcgaggcccaggtctatggtaacatgggc
atcacaaaaatgaacatgggagtaatggaggaggccattggctacttcgagcaacagttg
gcgatgttgcagcagctcagtggcaacgaggccgtgctggaccgtggtcgcgcctatggg
aacttgggagactgctatgactcgctgggagattttgaagaggcaattaagtattacgac
cagtatctctccgtcgcacaaagcctcagccacatgcaggaccaggagaaggcataccga
ggtcttggtaatggccacagggcgatggggaacctccagcagtctctggtgtgtttcgag
aagcgtctggtggtggctcatgagctgggcgagtgtggagggaaggctcaggcgtatgga
gagctgggcagtctgcacagccagctggggaactacgagcaggccatctcatgcctggag
cggcagctcgccatcgcccgcgacacacacgaccggctgctggagggcgacgccagctgt
ggactgggcgccgtgtaccagctgatgggcgaacacgacacggctctgcagtttcaccag
ctggacctgcagatcgcggaggagacgggcagctccggctgtcaggcccgggcctacggg
aacctgggactcacctacgagtctctgggtaatttcgagcgtgccgtggtgtatcaggaa
cagcatctgagcgtcgccgctcagaccaacgacctggtggccaaaacgctggcctacagc
agcctgggacgcacacaccacgctctgcagaactactcgcagtccgtcatgtacctgcag
gaaggtctgcgtctggcggagcagctgggccgtcgagaggacgaggccaagattcgacac
cgtctggggctctcgctgtgggccagcggcaatctggaggaatcccagcaccagctgtac
cgtgcgtcggctctgttcgagaccattcgtcatgaagcccagcacagcaccgactacaag
ctctcgctgttcgacctgcagacctcctcgtaccaggctctccagagggtcctcgtcagc
cttgggcatcacgatgaagctctggccgtggcggagcgcggacgcactcgggctttcgcc
gatctgctggtggagagacagacgggccagcaggactcggacccgtacacacccgtgacg
gtcgagcacattctggacacggtgaacgggcagcgggcgctggtgctctacttctctctg
gcggcggggtacctgtacagctggctcctggccccggggtccgggatcctgaagtttcac
gaggtgtatctgggcgagggcgcgtcggaggacttccaggaggccggtggcggcgtcatg
ccatcgtctctggagcaacacatcgctaatgcccgtgaagctctgggtgtggactcctac
tacagcagagcgtgttccagcagcgagactgagagcgaagctggagaccttctggaccag
cagtttgaagaactcaacaataaactcaactcagtgaccgacccgaccggcttccttagg
atggtttccagaaacaacctcttcaacaggagttgtcagagtatgacgagtctcttcagt
aacaccgtgtctccggtgaaggaaggcacgtcgcccctgccccggcgccccagtgcgctc
agcaaacccccgttacgagcgctctacgacctgctcatcgccccgatggaggggggcctg
atgcactccagcggtcccgtcggcagacaccggcagctggttctggttctggagggcgag
ctgtacctcatcccgttcgctcttctgaagggaagctcatctaacgagtatctgtacgag
cgcttcagtctcatcgctgtaccgtccatcggcagtctgggaaccactgctaaagttcac
cctcggcggacgggtcctgtcctgtgtaatggaggaagctcgatggccgcagtggtgggg
aaccctcggctgcccccgtccgtgatggaccgctggctgtggggtccgatgcccagcgct
gaggaggaggctcacatggtggccgatcagctgggctgccaaccgctggccggtcccgcc
gccaccaaggagcgggtgatgagcgccctcacccaggccgagtgcgcacacttcgccaca
cacatctcctggaagctggcggccctggtcctcacgcccagccaggactccggctctgga
gcgtcagcgacgggggcttcgggaggaggagcgggagctggagagagcgcggtgaagtcc
aactacaccatccccgagagtctgcgcgtgccggacgacgccagcgacgccgaaagcatc
tgtgacagtcctccgctgcaggagttcctgctcaccgcggccgatatcctcgacctcagg
ctgcccaccaaactagtggtgctcggctcgtaccaggagtcggatagtaaagtgacggct
gacggggtggtgggtctgacgcgggcgttcctggccgccggagcgcagtgtgtgctggtg
tctctgtggccggttcccgtcgccgcctccaagatgttcatccactcgttctacagcgct
ctcctcaacggcaccaaagccagcgcggccctcgcagacgccatgaagaccgtccagagc
agcaaacagttctcgcacccctccaactgggccggcttcatgctgattggctgtgacgtt
aaactgaacagcccgtcatctctgattggtcaggctctggctgagatcctgcagtatccg
gacaaagccagagatgccctgagggtcctgcttcacctggtggagaaatctctccagcgc
atccagaacggccagaggaactcgatgtacacgtctcagcagagcgttgagaataaggtg
tgtggtgtcccgggctggcaggctcttctgacggcggtgggcttcagactggactcggct
gggacgggcctccccgctgcggtcttcttccccaccgctgaccctggagaccgcctgcag
cagtgcagcaccacactgcagtccctgctgggtttgcctcctccggctctgcaggcgttg
tgtaaactgatcacggcgtcagaaaccggagaacagctcatcaaccgggctgttaaaaat
gtagtgggaatgctccatcaggttttggtgcagcttcagtctggagagaaggagcaggat
ttctctctcgcacccattcaggtgtccatcagtgtgcagctctggagactccccggctgt
cacgagttcctggccgctctggggtttgacctgtgtgaggtgggtcaggaggaggtggtg
ttgaagacgggtaaacaggccaaccgtcgcaccatgcactttgccctgcagtcactgctg
gcgctgtttgactccaccgagctgccgaagcgtctgagtctggacagttcctcgtctctg
gagtcgctggcctcggcacagtccgtgtcccaccagctgcccatgggcttccccaaccct
cccttctcccccccgtgccccgacagcctggcatcggacgccatctccgtctacagcctg
agctccatcgcctcctccatgagctttctgtcccgtcccgagggagcgtccgagttcatt
agccagcgctcgcgacaacaggagctggagcggcatcggggcggagccgggattttcgcg
tcccacaggcacacggcagtgccgcgcagtcgctcgtccccacacggagccgtgggagga
cacgaagacgaagagtacgagggatacagtataatcagcagtgagccgctgggaagccaa
tgcgacacgcttcctcgtcccgcgaaccacaggaaccatcggggcgcggcgcgcggcgga
gccggcaggggttacgcggtatccgtgtcctcccggggaagcgtgagcaccccgacgtcc
cctgtcaaaaccaccctcgttcccagtcccaactccccgttccagaaggtcgggaaggtg
agcagctccgacacgggcgagtccgatcagtcgagcaccgagacggacagcactgtgaaa
tcccaagaggagcgtacgtccggagcgcctttggacccgcaggaactcgcgcagaaaatc
ctcgaagagacgcaaagccacatgcgggccgtcgagactttgcagagaagcgtcccgctg
ggtgacgggatgagcagcggaggtcctccgaccccaaccggaggctctgctttccgttcc
tcggagacgagcgcgttcagtcggcctagtagcagagctagcatcaaggctcaatcgtct
ccgctcccgacccgccccaaaccgccttcgcggacctcctcccttcagaagatcagctcg
ggatacaacagccccgccacgtctgaaacgtccctgaaggaaggcagtcagccctcgcct
acttccgagcagttcaaactcaagtatcccagctcgccgtatagcggacacatctctcgc
tcgcccagtaacgtctcgcccagctcggggcaccagtcgcccgccgggagcgctccctcc
ccggcgctgtcctactcctcgacgggttcgactcgctccagtccggcggacgccccggat
atcgaccgactcaaactcgccgctattgacgagaaggtccaagcgatccacaatctcaag
accttctgggccaacgcgacccaacagcagcactcgggaccgatgcgggtgctccgcggc
gggaaactgagcaccgcaaaacgagacgtcctgggtcttttgaacctctcgcctcgccat
ggagtgacgggtcaggattcggccggtcaggatgtggcgctcgaacacagaaatccacca
aacggccatcgcaaaatcgatccgaagagagtcgcgccttctccgacggcctccaccggt
tccagtcccggttcgcattcgatccgactgcctacggggaacgggtacaagttcctctcg
ccgggacggttcttcccttcgtctaaatgttga
DBGET
integrated database retrieval system
