Pimephales promelas (fathead minnow): 120482289
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Entry
120482289 CDS
T08155
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120482289 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120482289 (pou2f1b)
03021 Transcription machinery [BR:
pprm03021
]
120482289 (pou2f1b)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120482289 (pou2f1b)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
120482289 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
DUF5130
Motif
Other DBs
NCBI-GeneID:
120482289
NCBI-ProteinID:
XP_039532363
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNPSETSKCAMESGDENTGAQTNGLDFQRQTVQTTSAITNA
HAQALLQQLTLTPAQQQLLIQQAQAQLLAAAVQHSAGQQSSTTGANISASAATPITLSQP
IQITPSSTIRICPGSFFTCPGDVSSVKQLQQLQQQQNLNLQQFVLVQPGHHIATQLQPTQ
FIISQTPQGQQSILQAQNLLTQLPQSQANLLHTQPSITLATQPATPTRTIAATPIQSLAH
SQTTPKHIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTI
SRFEALNLSFKNMCKLKPLLEKWLNDAVCAENQTSEQALSSPSSLGSPGLGIEGLNRRRK
KRTSIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPP
SSGSICSTPIKAIFPHTTTLVPSTASLVTSNTPTTMTVNPITSLTSTSVGFTGTTIGSAT
TNTASVISTAPVVTTVASSPSLSPSPSVVQTSSEQASAQEIVAAVSQASSSLANTLGTGQ
VMVASPSLTAALQGAAQLPTSASLAAMAAAAGLNPGLMASSQFNPGGALLSLAPGGLGSA
LSPALMSNSTLATIQGVWSALASSGSLPITSLDGSGNFLFANTSAGSTPNLMTTPLFLNP
QNLSLLASNPVSLMSAGGAGGAAGALNLHITADAHQSAVTTATMPASTITTASKAQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatccatcggaaacaagtaaatgtgcaatggagagcggggacgaaaacactggtgcccaa
acaaatggactggactttcagaggcagactgtgcaaacaacaagcgcaatcaccaacgca
cacgcacaggccttgctccaacagttgactttgactccagcgcagcagcagttattgata
cagcaggctcaggctcagctcctggcagcagcggtgcagcattcagccggccagcagagc
agcaccacaggagccaacatctccgcctccgctgccacccccatcaccctctctcaaccc
atccagatcacacctagctcaacaataaggatttgccctggcagttttttcacctgtcct
ggggatgtctcaagtgttaaacagttacagcagctgcaacagcagcagaacctcaacctg
cagcagttcgtgctggtccaaccgggacaccacatcgcaacacagctgcagcccacgcag
tttatcatctcgcagacgccacagggccagcagagtatcctgcaagcccagaaccttcta
actcaactacctcaaagccaagccaacctcctgcatacccagccaagcatcactcttgcc
acacagcctgcgacacctacgcgcacgatagcagcgacccccatccaatccctcgctcac
agccagacgacaccaaagcacatcgacacacccagcctggaggagcccagtgacctggag
gagcttgagcagtttgccaagacctttaaacagagacgcatcaaactgggcttcactcag
ggggatgttggccttgccatgggaaaactttatggaaatgactttagccagaccaccatt
tctcgctttgaggccttgaacctgagctttaaaaacatgtgcaaactgaagcccctgctt
gaaaaatggctcaatgatgcagtttgtgcagagaaccagacttctgaacaggccctgtcc
agtcccagctctcttggctcgcctgggctgggcatagagggcttgaaccgccgccgcaag
aagaggaccagcatcgagaccaacatcagagtggccttagaaaagagctttctggagcag
aaccaaaaacctacctctgaggagatcaccatgatcgcggaccagctcaacatggagaaa
gaggtgatccgagtgtggttctgtaaccgcagacagaaagagaagaggatcaacccaccc
agcagtggcagcatctgcagcacccctatcaaagcaatctttcctcacaccacaactctg
gtaccgagtacagccagtcttgtgaccagtaacacaccgactacgatgactgtcaaccca
attacatctctcaccagcactagcgtcggtttcactggcacaactattggctcggccacc
actaacacggcatcggtcatctccactgcacctgtggtcaccaccgtagcatcctctcct
tcgctcagcccttcccccagcgtggtgcagacgtcctcagagcaggcttcggctcaggag
atagtagcggcagtgagtcaggcatcttcctccttggcaaacactctgggcactgggcag
gtgatggtggcgtcacccagcctcacggctgctctacaaggagctgcccagctgcccacc
agcgccagcctcgccgccatggctgcagccgctggcctcaaccctgggctcatggcatcc
tcgcagttcaatcctggcggggctcttcttagtttggcgccaggaggtctcggaagcgct
ttgagtccagcactgatgagcaatagcaccttggccacaatccaaggtgtgtggagcgct
ctggcatctagtggctctctgcccattacgtcactggacgggagcgggaactttctgttt
gccaacaccagcgctggcagtacccctaacctcatgacgacaccactcttcctgaaccct
cagaacttgtcactgcttgccagtaacccggtcagcttaatgtctgcaggaggggccggg
ggtgctgccggagccctcaatctgcacatcaccgccgatgcccaccagagcgctgttacc
acggcaactatgcccgcctccaccatcaccacggcctctaaggcccagtga
DBGET
integrated database retrieval system
