Pimephales promelas (fathead minnow): 120482364
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Entry
120482364 CDS
T08155
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120482364 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120482364 (gtf2b)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
120482364 (gtf2b)
Prokaryotic type
Archaeal type
TFB
120482364 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
120482364
NCBI-ProteinID:
XP_039532555
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MASTSRGDSLPKVQCPNHPEAQLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNEKA
TKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAFKE
ISTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacgagccgtggagactctcttcccaaggtgcaatgccccaatcaccccgaa
gcacagctggtggaggattacagggcaggagacatgatctgcccagaatgtggccttgta
gtaggtgaccgtgtaattgatgtagggtcagaatggagaacgttcaccaatgagaaagca
actaaagacccgtctcgtgttggtgacgcccagaaccctcttctcaatggaggtgacctc
accaccatgatcagcaaaggaacaggggcagcaagctttgatgagtttggaaattccaag
taccagaatcggagaaccatgagtagctctgatcgagccatgctaaatgccttcaaagag
atcagcaccatggccgacaggatcaatctccccagaaacatcatcgaccgaacaaacaac
ttgttcaaacaggtttatgaacagaaaagtctgaaaggcagaagtaatgatgcgatcgct
tcagcctgcctttacatagcgtgcagacaggagggcgtccctagaacatttaaagaaatc
tgtgctgtgtctcggatctccaagaaggagataggccgttgcttcaagcttatcctgaag
gctcttgagacgagtgtggacctcattacaaccggcgacttcatgtcacgtttctgctcc
aacttgggcttgcccaaacaggtgcaaatggcggccactttcatcgccaggaaggccgtg
gaactggacttggttccagggcgcagtccaatctcagttgcagccgcagccatctatatg
gcctcgcaagcgtctgctgagaagaagacgcagaaagagattggggacattgctggagtg
gcagacgtcaccatccgtcagtcttaccgtctcatttacccccgtgctgccgatctcttt
cctcccgacttcaaattcgacacacctgtggataaactgcctcaactgtaa
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