Pimephales promelas (fathead minnow): 120482387
Help
Entry
120482387 CDS
T08155
Symbol
arhgef4
Name
(RefSeq) uncharacterized protein arhgef4 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120482387 (arhgef4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120482387 (arhgef4)
Membrane trafficking [BR:
pprm04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120482387 (arhgef4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_2
SH3_9
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
120482387
NCBI-ProteinID:
XP_039532604
LinkDB
All DBs
Position
Unknown
AA seq
2914 aa
AA seq
DB search
MEESDAGNGTGTHGCELERSAGDGGLDEVQMHLACLPERYMRAKFSLSAYIFCWTVVKLC
QRLSPSAVLPQAPALEDSGSEAGCLEDGESQQEDHGEQHHHQEWCEPVPEAAQDKKEEYF
DTNSWRSDTFSNPNHETKDGCRTSHSYETGSCSVGNLVSHSPLVKPSPSVRERNPSLAKS
HHAVFDSHSRTTEQLQTQTGNTEMIHMWVDGTGISDAKGGSDCGEVISNSPAGPGLDSSS
RNGLSYVVTSLVELKDTVEPQTLCESSAKDSLFTLTDSDGAKSQFTDTFDEKFKLEQINN
NIMDTQSGYSEPHIQFTSEKELRQNDIDTSNTEIEIIGSVVKSTDAEHNKSNTQHDELNV
DDNEISLSVSRHLSKYESVSVEEPIEQKVVESTGHSQSHNSIEHTNSQDSTENIQSQASI
KCSQSQNSVEHRQSQDLTAHSQLQDFVECSQTQESVECSQTQVSAEYSQSQDPVECSESQ
DLIYHNQSQYSVEYSQTQDSIEHTNSQDSTEHIQSQASIKCSQSQNSVEHRQSQDLTEHS
QSQDSVECSQSQDPVECSESQDSIEHKDSVEHSQSHTSSEHSQSHDSVQHRKSMDSVECS
QSQDSIEHSQSNDSVEYSHTSSEHRQSQDSVERSQSQDSIEHSQSQESVEHSLSHTLSEH
SQSHDSIEHSQSQESVEHSLSHTSSEHSQSHDSVQHRKSLDSVECSLSQDSIEHSQSHDS
VENSHTSSEHRQSQDSVEHSLSHTSSEHSQSLDSVQHRKSLDSVECSQSQDSIEHSQSHD
SVEHSHTSSEHRQSQESVEHSLSHTSSEHSQSLDSVQHRKSLDSVECSQSQDSIEHSQSH
DLEYSHTSSEHRQSQDSVECSQSQDSIERSQSQESVEHSLSHTSSEHSQSHDSVQHRKSL
DSVECSQSQDSIEHSQSHDSVEHSHTSSEHRQSQDSVECSQSQDSIERSQSQESVKQSHT
SSEHSQSQDSVQHRKSQDSEHNQSQNPMENSQSNTSLEHSQLQFSVEDRLSQVDLSKAGF
ISNTVAYERGQLKQDCMDIWMDCEVNQSLKTSGRHSSKDTDKELDLNFEKNESLNFKKKD
LTDTPVVSENECFGAEGAFSNVPNATSAEASNSLHQHLINDWTSEQSDLQAITHCIHQNC
PVMHSEKEDYSVSRYMDSYCVQDSGKTYSEDHEPEADFYKTHQCPNSKINFLKLGEFTET
QVCVSAKDGEILQRTQEDRNMHHNIKGYQKECTIVPSIEQSVIYSDSLGCIEYSRPKSLS
VACPDTKAAEADGCPVDSPVESLASLFEKSPVSPTDVCFELSDGLQMNCKQLAHCVIEYT
ETSKQFHRPNTLSDKQTRQNESVVEILSSECPDPFTPFDYSQLNSRNHEYSSDTNNNIKA
ITLADCASSVQMSLPSSLQKYSRSSNNAGCLVSKGGDCKDSESFSTPAGRASSFKAPEMN
IVMYSKDNVKKPSEFKDVTQKQLCDCHNGKECQLHSSSVEGEQAAGGFQFKGTDGISQSS
TGVLQTLSPPNTDGEVNSDSTNCEFSHTVHLLANKHPELAREESKLPLSGSLKVDDTHAL
ENTERRLETSTTNSPEIPDSLCEKSDPLFKQSLQLHNPKIEGAFVTCCRILPITNLEAIL
ESDRSLESLFVLENGLEEEQKGSPISEGVLNEKWSSFDGVTNRPHDNISAMRTKSNVAVV
MNEPDAGETMSSLSNEFDSSDGHSVSSSVSQDLDFSTNSEETEDSTQSSSSLRGSARNKR
TQSGKGSMFSVFSRMPSFRKNKREHKGNNKVDPEVKDSNVDGDERDEVKCSRSLTRNSSP
TSLYKTHISQSTDHLTDITKFSDHSNDDIFEKAFAFNLQCREKYTQSQNLNHKDGDAQNF
KASPRTEGLQQKRSKSTDNLNLRLKLAMAHKSLSSLFESRYPERDNQEQILQSENEEGKT
KQSWRKMKHFKEAELYKRTLSLPGTVCDKSTHQSHIDCAFCAPQNRSRLNSSPASQKSLR
STCHFDPQSLESAPQEQAEDSTCLEGGELPYATSSDSDQASVDGFESNVEDRSQSPVNPN
VLALATQMSPIWTRSLSCFENTDSPTRPMSPKPSSPVLGWTHRRSFRYPSRSVASSLCSL
GQGVSTDGLSDPPQRPRSLKPRTAQLTTTQSFDSEYLLEDSSSDSHSQNSLNSASLINKP
EHVQQTTDPAIQSAERRQQGNACVLRVKSREQGTAAPRPISDLYGWTMSLQGIREVALDL
ERKNNSTAAHLRSCSFETLTDVENTHKKKLSIQRSLRQLSTPTSEKHKKLHARLSLTSPE
QFPSLPLKDHFFSQSTPVGLDFLGWPHYAFISESNLGTPAQEAHGQIAPLALVINDGSQD
KSGLADEVGSEDDLYNEFRSSSNRFGHPGGGGEQLAINELISDGSVCAEALWDHVTMDDQ
ELGFKAGDVIEVVDATNKEWWWGRVLDSEGWFPASFVRLRVNQDEPMEEYLAHLDGASEG
GGASMGGPLGPGLPCKEQMRANVINEIMSTERDYIKHLKDICEGYIKQCRKRTDMFTEEQ
LRTIFGNIDELYRFQKKFVKALEKKFNKDHPHLSEIGSCFLEQQTNFQIYSEYCNNHPNA
CVQLSKLMKIKKYVFFFEACRLLQKMIDISLDGFLLTPVQKICKYPLQLAELLKYTNPQH
RDYKDVEAALNAMKNVARLINERKRRLENIDKIAQWQSSIEDWEGEDILSRSSDLIFSGD
LTKISQPQAKGQQRMFFLFDHQLVFCKKDLLRRDILYYKGRLDMDQMQVVDVEDGKEKDF
NVSVKNALKLCSPGGEEVHLLCAKKPEQKQRWLRAFADEREQVQHDLETGFTITEVQKKQ
AMLNASKSHPTGKPKALALQHLVALRSPSLLHPKTSKCLRFSEPSGPLVPRATLTSPLLP
EGPQRRQGRGVRVPPGVLRRAISWVSSQSREPIE
NT seq
8745 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtctgacgctgggaacggtactgggacgcatggctgtgaactggagcgttct
gctggagacgggggactggatgaggtgcagatgcatctcgcctgcttaccggagcgatac
atgagggctaagttttccctctccgcctacatattttgctggacagttgtgaagttgtgt
cagagattaagcccgtcggcagttcttccccaggccccagctttagaggattctgggagt
gaagcaggctgtctggaagatggagagtctcagcaggaggaccatggagagcaacatcac
catcaggaatggtgtgagccggttcctgaagcagcgcaggataaaaaagaggaatatttt
gacacaaactcatggcgcagtgacactttctctaaccccaatcatgaaactaaggatggc
tgcaggacgtcgcacagctatgagactggctcttgctctgtgggtaatctggtctcacac
tctccattagtcaaaccctctccttcagtcagagagagaaatccctcattagcaaaaagc
caccatgctgtttttgacagtcacagtcggaccactgagcaattgcaaacacagactgga
aatacggagatgatacacatgtgggttgatggtactggaatttctgatgctaaaggtggt
tcagattgtggggaggttatcagcaattctccagcaggacctggacttgattcttcttca
aggaatggcctatcctatgtagtaacatccctagtggaattaaaggacactgtagaacca
caaacactctgtgagtcaagtgctaaagactcattattcaccttaacagacagtgatgga
gccaagtctcaatttactgacacctttgatgaaaaattcaaattagaacaaatcaacaac
aatatcatggacactcaatcaggatacagcgagccacacatacagttcacaagtgagaaa
gagttacggcaaaatgatattgacactagtaacactgaaatagagataattggatccgtt
gtgaaaagtacagatgctgaacataataaatcaaacactcaacatgatgagctgaatgtt
gatgacaatgagatcagtttatctgtctcacggcatctttctaaatatgagtctgtatca
gttgaggagcctattgaacagaaagttgtggagtcaacaggacacagccaatcacacaat
tcaatagaacacaccaattcacaggactctacagaaaacatccaatcacaagcttccata
aaatgcagccaatcacagaattcagtagaacacaggcaatcacaggacttaacagcgcac
agtcagttacaggattttgtcgaatgcagccaaacacaggaatctgtagaatgcagccaa
acacaggtctcagctgaatacagccaatcacaggacccagtagaatgctcagaatcacag
gatttaatatatcacaaccaatcacagtactcagtagaatactcccaaacacaggattca
atagaacacaccaattcacaggactcgacagaacacatccaatcacaagcttccataaaa
tgcagtcaatcacagaattcagtagaacacaggcaatcacaggacttaacagaacacagt
cagtcacaggattctgtcgaatgcagccaatcacaggacccagtagaatgctcagaatca
caggattcaatagaacacaaggactcagtagaacacagtcagtcacacacttcatcagaa
cacagccaatcacatgattctgttcagcacaggaagtcaatggattctgtagaatgtagc
caatcacaggattcgatagaacacagccaatcaaatgactcagtagaatacagtcacact
tcatcagaacacaggcaatcacaggactcagtagaacgctcccaatcacaggattcaata
gaacacagccaatcacaagaatcagtagagcacagtctttcgcacactttatcagaacac
agccaatcacatgattcaatagaacacagccaatcacaggaatcagtagagcacagtctg
tcacacacttcatcagaacacagccaatcacatgattctgttcaacacaggaaatcactg
gattctgtagaatgtagcctatcacaggattcgatagaacacagccaatcgcatgactca
gtagaaaacagtcacacttcatcagaacacaggcaatcacaggactcagtagagcacagt
ctgtcacacacatcatcagaacacagccaatcactggattctgttcaacacaggaagtca
ctggattctgtagaatgcagccaatcacaggattcgatagaacacagccaatcacatgac
tcagtagaacacagtcacacttcatcagaacacaggcaatcacaggaatcagtagagcac
agtctgtcacacacttcatcagaacacagccaatcactggattctgttcaacacaggaaa
tcactggattctgtagaatgtagtcaatcacaggattcgatagaacacagccaatcacat
gacttagaatacagtcatacttcatcagaacacaggcaatcacaggactcagtagaatgc
tcccaatcacaggattcaatagaacgcagccaatcacaggaatcagtagagcacagtctg
tcacacacttcatcagaacacagccaatcacatgattctgttcagcacaggaaatcactg
gattctgtagaatgcagccaatcacaggattcgatagaacacagccaatcacatgactca
gtagaacacagtcacacttcatcagaacacaggcaatcacaggactcagtagaatgctcc
caatcacaggattcaatagaacgcagccaatcacaggaatcagtaaaacaaagtcacact
tcatcagaacacagccaatcacaggattctgtacagcacaggaaatcacaggattcagaa
cacaatcaatcacagaaccccatggagaatagccaatccaatacttcactggaacacagc
caactacagttttcagtggaagacagactatcacaggttgatctcagtaaggctggtttt
atttcaaacacagtggcttatgaaaggggacaattaaaacaggactgcatggacatttgg
atggactgtgaagtcaatcaatcattgaaaacatctggaaggcattcatcaaaggacact
gacaaagaacttgatttaaactttgaaaagaatgaaagtctaaatttcaaaaagaaggac
ttgactgacactcccgttgtttcggaaaatgagtgttttggagctgagggagctttctca
aatgtgcctaatgcaacttctgctgaagcgtcaaattcactgcatcagcatctgatcaat
gactggacatcagaacagtcagatctgcaggccataactcattgcattcaccaaaattgc
ccagtaatgcacagtgaaaaagaagattactcagttagtagatatatggacagttattgt
gtgcaggacagtgggaaaacatattcggaggaccatgagcctgaggcagatttctacaaa
acccatcagtgccctaatagtaaaattaattttctcaaactgggtgaattcactgaaaca
caagtttgtgttagcgctaaagatggtgaaattttacaacgaacacaggaggatcgcaac
atgcatcacaatattaaagggtaccagaaagaatgtacaatagttccctctattgaacaa
tcagtaatttactctgacagtttgggatgcatagaatactctaggcccaagtcgttgagt
gttgcgtgtcctgacacgaaggcagctgaggctgatgggtgtcctgtagacagtcctgtc
gaatctttggctagtctgtttgagaaatctccagtcagccctacagatgtttgctttgag
ctcagtgatggccttcaaatgaactgtaaacaattagcgcattgcgttatagaatataca
gagacctccaaacaatttcaccgacccaacaccctatctgacaaacaaacaaggcaaaat
gagtcagtcgttgagattttgtctagtgaatgtcccgatcctttcactccttttgattat
tctcagctgaacagtagaaaccatgaatacagctctgacacaaataataacattaaagcc
attactttagcagattgtgcctcaagtgtacaaatgtctttgcctagttctttgcaaaaa
tacagcagatctagtaataatgctggatgtttagtctcaaagggcggtgattgcaaagat
agtgaatcttttagtaccccggctggtcgggcttcctccttcaaagcacctgaaatgaat
attgttatgtacagcaaagataatgttaagaaaccttcagaattcaaagatgttacacag
aagcagctctgtgattgccataatgggaaggagtgccagctgcactcatcttcagtggag
ggagagcaggcagcgggaggatttcagttcaagggcacggacggcatcagtcagagcagt
actggagttttgcaaaccttgagtcccccaaacacagatggtgaggttaattcagactct
acaaattgtgaattttcacatactgtccatttgcttgcaaacaaacatccagagcttgcc
cgagaggaaagcaaattaccattgagtggctctctcaaggtcgatgatactcatgcatta
gaaaacacggagagaagactcgaaacatccacaacaaactctcctgaaatccctgattca
ttatgtgaaaagtctgatcctctttttaagcagtctttgcaactgcacaaccctaagatc
gaaggcgcgtttgttacatgttgtcgaattttacccatcactaatttagaagctattttg
gagtcggaccgttcactggagagcctgtttgtgttggagaatggactggaggaggaacag
aaaggaagtccaatatcagaaggtgtacttaatgagaaatggagctcttttgatggcgtt
acaaaccgcccacatgacaacatttctgccatgcgcacaaaatccaatgtagccgttgtc
atgaatgaaccagacgctggagaaacaatgagctctttatcaaatgagtttgatagcagt
gatggccatagtgtttccagttctgtgtcacaagaccttgacttcagtactaacagtgag
gagacggaggacagcactcagtcatcgtctagtcttcgtggttctgcgaggaataagaga
actcaatcagggaagggctctatgttttcagttttttctcgaatgccctcattccgcaag
aacaaacgagaacacaaaggcaataacaaggttgatccggaagttaaggactccaatgtg
gatggagatgaacgggacgaagtaaagtgcagtaggtcactcacacgtaacagttcccca
acttcgctgtacaagacccatatttcacaaagtacagatcatctcacagacattacaaag
ttttctgaccactccaatgatgacatttttgaaaaggcttttgcttttaacttgcagtgt
agagagaaatatacacaatcccaaaatttgaatcacaaagatggagatgcacagaatttt
aaagcttccccaaggacagagggattgcaacaaaaaagaagcaagagtaccgataacttg
aacttacgcctgaagctcgcaatggctcacaagtctctgtctagcctgtttgagtccaga
tatcctgagagggacaaccaggaacagatcttgcagtctgaaaatgaggaggggaaaacc
aagcagtcctggaggaagatgaaacattttaaggaagcagaactttacaaaagaactcta
tcgcttcctgggacggtctgtgacaagtccacacatcagagccatattgattgtgccttc
tgtgctcctcagaacagatccagacttaacagctcaccagcttcccaaaagagtttaagg
agcacttgccattttgacccacagagtttggaatctgcacctcaggaacaggctgaagac
agtacgtgtctggaaggaggtgagctaccttatgccacttcctcagattctgatcaggcc
tcagtagatggctttgagtccaatgtagaggataggtcgcagtcacctgtaaatcccaat
gttcttgcactcgcaacccagatgtcacccatctggaccaggtctctcagctgtttcgag
aacactgatagtccgacaaggcccatgagccccaaaccttccagtcctgttctgggctgg
acacaccggaggagcttccgttacccctcgagatccgttgcgtcctctctctgctcgctc
ggtcagggagtgagcactgacggcctctccgatccacctcagaggccgaggtctctgaaa
ccaaggacagcgcaactcactacaacccagtcttttgattctgaatacttactagaggac
agcagttcagacagccattctcagaatagcctgaattcagcatccctgataaacaaacca
gagcatgtacagcagactactgatccagccatccagtcagcagagagaagacaacaagga
aatgcatgtgtgcttcgggtgaagtccagagagcagggtacagctgcacccagacccatc
tcagacctctacggttggaccatgtctcttcagggcatcagagaggtagcgcttgacctg
gaaaggaagaacaattcgaccgcagcacatctacgctcatgctcatttgaaacgttgact
gacgtggagaacacccataaaaagaagctaagcattcagcgaagtttgcgccagcttagc
accccaacatctgagaagcacaagaaattgcacgctagactttctctcacttctccggag
caattcccctctcttcccctcaaagaccacttcttctcccagagcacacctgttggactg
gactttttgggctggccgcattatgcgtttatttcagaatcaaatctcggcacaccagca
caagaggcacatggacagattgctcctctagcgttggtgataaacgatggatcgcaggat
aagtctggccttgcggatgaggtggggagtgaagatgacctgtacaatgagtttcgcagc
tcctccaaccgatttggacacccaggaggaggaggagagcagctggccataaatgagctg
atcagtgatggcagcgtgtgtgcggaggctctatgggaccatgtcactatggacgaccag
gagctgggcttcaaagctggagacgtcatcgaagtagtggacgccacaaacaaggagtgg
tggtggggccgggtgttggacagcgagggctggttccctgccagctttgttcggttacgg
gtgaaccaagatgagcccatggaggaatacttagcccatctagacggggcctcggagggg
ggtggagccagcatggggggccctttagggcccggcctgccctgcaaggagcagatgaga
gccaacgtcatcaatgagatcatgagcacagagagggattatatcaaacacctgaaagac
atctgtgagggctatataaaacagtgccgaaagaggacagacatgtttaccgaggagcaa
ctgcgcactatctttggcaacatcgatgagctctaccgcttccagaagaaattcgtcaaa
gccttggagaaaaaatttaacaaagaccatcctcacctcagcgagattggctcctgcttc
ttagaacagcaaacaaacttccagatctactcggagtattgcaacaaccaccccaatgcc
tgcgttcagctctccaaactgatgaagatcaagaagtatgtgttcttctttgaggcctgt
cgcttgctccagaagatgattgatatttcattggatggattcctgcttactcctgttcag
aagatctgcaagtaccctcttcagctggctgaactgctgaagtacaccaacccacagcac
agagattataaggatgtggaagctgccttaaacgcaatgaagaatgtggccagactgatc
aatgagaggaagaggcgtctggagaatattgacaaaatcgcccagtggcagagctctatt
gaggactgggagggtgaagacatcttgagcaggagctctgatctgattttctcaggagac
ctgaccaagatctcccagccacaggccaaaggccagcagcgaatgttcttcctctttgac
caccaattggttttctgtaagaaggatctgcttcggagagacatcctgtactacaagggt
cggttagacatggatcagatgcaagtggtggatgtagaggatgggaaggagaaggacttt
aacgtgagtgtgaagaatgccttgaaattgtgttctcccggaggagaggaggtccacctc
ctgtgtgccaagaaacccgagcagaagcagcgctggctgcgagcctttgcagatgaacgg
gaacaggtccagcacgacctcgaaacaggttttacgatcacagaggtccagaagaagcag
gccatgttgaatgcatctaaaagtcacccaacagggaagcccaaagcattagctttacag
caccttgtggcactcagatctccatcacttcttcacccaaaaacttccaagtgcctacgt
ttttccgaaccttcaggacctctggttcccagggccaccttaacttcacctctcctccct
gaaggccctcagcgtaggcaggggcggggggttagggtgcctcctggggtcctgcgcagg
gcaatatcctgggtgtcctctcaaagtagagagccgatcgagtag
DBGET
integrated database retrieval system
