Pimephales promelas (fathead minnow): 120482418
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Entry
120482418 CDS
T08155
Symbol
mef2ca
Name
(RefSeq) myocyte enhancer factor 2ca isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120482418 (mef2ca)
04371 Apelin signaling pathway
120482418 (mef2ca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120482418 (mef2ca)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
120482418 (mef2ca)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
120482418
NCBI-ProteinID:
XP_039532670
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MGRKKIQIARIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDIDAEDSGHSPESEDKYRKIN
EDIDLMISRQRLCAIPQSNYDMPVSIPVSNHNSLIYSHPGASLNPNLLPLAHPSLQRNSM
SPGVTHRPPSAGNTGGLMGPDLGSGVGTSAGNGYGNHRNSPGLLVSPGNMSKNMQAKSPP
SMSMNMSNRKPDLRVLIPPGSKNTMPSISEDVDMLLNQRINNSQSAQSLSTPVVSVATPT
LPGQGMGGYPSALSTSYGTEYSLSSADLSSLTGFNSSTSLHLGSMTGWQQNMQHSGLGHL
GNCGSTQLCQSSTLSLPSNQSLHIKSEPVSPPRDRAGGTPGGYAQPLPPPLAQQQGHLRQ
DSGRSPVDSLSSCGSSYEGSDREDHRSDFHSPLGLLRPSQDERQSPSVKRMRLSEGWAS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagattcagattgcacggataatggacgaacgcaacagacaggttacg
tttacaaagaggaagtttggactaatgaagaaggcctacgagctgagcgttctgtgcgac
tgtgagatcgccctcatcatcttcaacagcacgaataaactgttccagtacgccagcacc
gacatggacaaagttctgcttaaatacactgagtacaacgagccccatgagagtcggacg
aattcggacatcgtggagactctgaggaagaagggtctaaacggctgtgacagtcctgat
attgatgctgaagattcaggccacagtccagaatctgaggacaaatatcgcaaaatcaac
gaggacattgacctgatgatcagcaggcagagactgtgtgccatcccccagtctaattac
gacatgcccgtctcaatcccggtgagcaaccacaacagcctgatctacagccacccagga
gcgtccctgaaccccaacctgctgccgctggcccacccctcccttcagaggaacagcatg
tcccctggagtgacccaccggcccccgagtgcaggcaacacaggtggcctcatgggtcca
gacctcggcagcggagtgggcaccagtgctggaaacgggtatggaaaccaccgcaactcc
cctggtctgctggtctctccggggaacatgagtaagaacatgcaggccaagtctcctccg
tccatgagcatgaacatgagcaaccgcaagccggacctgcgcgtcctgatcccccccgga
tccaagaacaccatgccctccatctcggaggatgttgacatgttgctgaaccagagaata
aacaactctcagtccgcccaatcgctgagcacaccagtggtgtctgtagccacgcccact
ctaccaggacaggggatgggcggttacccatcagccctctctacctcatacggtacagaa
tattctctcagcagtgcagacctgtcctctctgaccggttttaacagctcgacttctctt
catcttggttccatgaccggctggcagcaaaacatgcagcattctggtctaggacatcta
gggaactgcggcagcacacagttatgtcagagctccaccctctcgctgccgtccaatcag
agcctgcacatcaagtcggaacccgtgtctcctccccgggaccgcgcgggaggcaccccg
gggggctacgcccagcccctgccccctcccctggcccagcagcagggtcacctgcgtcag
gactcgggacgctccccggtggacagcctgagcagctgcggcagctcgtacgagggcagc
gaccgcgaggatcaccgctccgacttccactcgcccctgggactgctgagaccctctcag
gacgagcggcagagcccctccgtcaagcgcatgcgtctgtccgagggctgggcctcgtga
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