Pimephales promelas (fathead minnow): 120482459
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Entry
120482459 CDS
T08155
Symbol
rorcb
Name
(RefSeq) RAR-related orphan receptor C b
KO
K08533
RAR-related orphan receptor beta
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120482459 (rorcb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprm03310
]
120482459 (rorcb)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120482459 (rorcb)
Nuclear receptors [BR:
pprm03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
120482459 (rorcb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120482459
NCBI-ProteinID:
XP_039532733
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRSCLIDRINRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQLSQDCLAGLGGGLASRDC
EDTGEDSAHSRPYSSGGSSSNLSDLDDIATLPDGLIFDLPLTPEEAGEYCTLEMLGGSGS
AGSGSSSNQSSPGPSSVDFAESVRVKHEYVLPEKSLFTHSLLSSLPDNCSLHDIERITQN
VVKSHLETCQYSPEELKKLTWNLYTPEETCSFQLKSAEWMWQQCALHITNAIQYVVEFAK
RISGFMDLCQNDQIILLKAGCLEVLLIRMCRAYNSSNNTMFFDGKFASPQLFKALRCDDL
VNAVFELAKSLSRLQLSEEEMALFSAAVLLAPDRPWLTESQQVQKLQEKVYVALQHSMHM
NGATTEKLDKMVSKLPQMKSICNLHIDKLDFFRLVHPETAYNFPPLYREVFGSEINFPDS
TNS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaattgaagttataccgtgcaagatctgtggcgacaaatcctccgggatt
cactatggcgttattacgtgtgaagggtgcaagggttttttccgacgcagccagcagaac
aatgccatgtactcgtgttcacggcagaggagttgcctgatcgaccgaatcaaccggaac
cgctgccaacactgtcgtctgcagaagtgcttggcgcttggcatgagccgtgatgcggtg
aagtttggccgaatgtcaaagaaacagcgggacagcctgtacgcggaggtgcagcggcac
cagcagctgtctcaagactgcctggcgggtttaggcggcggtctggcatcacgtgactgt
gaggatacgggcgaagacagcgcacacagccgaccgtacagcagcggaggatccagctcc
aacctcagcgacctggacgacatcgccacgctgcccgacggcttgatattcgacctgccg
ctcaccccggaggaggcgggcgagtactgcactctggagatgctcggcgggtctgggagc
gcaggaagcggaagttcatccaatcagagctctccggggcccagctctgtagatttcgca
gaatctgtgagagtgaagcatgagtacgtcctgcctgagaaaagcctatttacacactct
ctcctgagctctttaccagacaactgctctctacacgacatagagcggatcactcaaaac
gtggtgaagtctcacctggagacgtgtcagtacagcccagaagagctgaagaaactcacc
tggaacctctacacacctgaagaaacctgcagctttcagctcaagtctgcagaatggatg
tggcagcagtgcgccctgcatattacaaacgccatccagtacgtggtggagttcgccaag
cgcatctctgggttcatggacctctgccagaatgaccagatcatcctcctcaaagcagga
tgcctggaagtcctgttgatccgaatgtgccgtgcttacaactcttccaacaacacaatg
ttttttgatggcaagtttgccagccctcagctcttcaaagctctcaggtgtgatgacctg
gtgaacgctgtctttgaattggctaaaagtctgagtcgtcttcagctaagcgaggaggaa
atggctttattcagcgccgcggtcttgcttgctccagatcggccatggttgacggagtct
cagcaggttcaaaagctccaagagaaggtttacgtggcccttcagcacagcatgcacatg
aacggagccactactgagaaactggacaagatggtgtccaaactaccgcagatgaagtcg
atctgtaacctgcatatcgacaagctggatttcttccgcctggttcacccggaaacagcc
tacaacttcccgcctctgtacagggaagtgttcggcagcgagatcaacttccctgactcc
accaacagttag
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integrated database retrieval system