Pimephales promelas (fathead minnow): 120482628
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Entry
120482628 CDS
T08155
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120482628 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_Teneurin
EGF_3
JAG1-like_EGF2
EGF_DL_JAG
cEGF
Motif
Other DBs
NCBI-GeneID:
120482628
NCBI-ProteinID:
XP_039533082
LinkDB
All DBs
Position
Unknown
AA seq
2473 aa
AA seq
DB search
MGQLPGVSSGRVILLVICSLKITYALQCVDPVKPCVNNATCVTFHNGTGYCRCAPGFLGE
YCQHKDPCYVGYCLNGGECTVSVAGVPGSPSCDCPLGFAGQRCEIQKNSTCYPNNPCNNE
GKCSLLPNDQYQCVCARGWTGQNCEQEDTCLSSPCANGGICHALPNHEFSCTCPPGYHGA
RCLNDTDECAISPSLCKREGICLNTPGSYRCNCQPGFTGPHCETVYVPCFPSPCLNGGTC
RQMTDTTYVCHCLPGFNGTNCEVNIDDCPNHRCQNGATCMDGVNTYNCQCPPEWTGQFCT
DDVDECRLQPNTCQNGGTCSNTRNGYNCVCVNGWSGPDCSENIDDCAAEPCTSGSTCIDR
VASFVCSCPSGKTGLLCHIDDACTSNPCKMGAQCDTNPVNGKFNCNCPSGYKGSTCAEDI
DECVIGPNPCEHGGSCKNTEGSFSCNCAPGYTGPRCEQDINECGSNPCLNDATCLDQIGD
YTCICMPGFDGLHCEIDINECASSPCLNNGRCLDQVSRFVCECPQGFTGEMCQVDIDECA
STPCHNGAKCLDRPNGYECECAEGFTGPLCMENINDCEPKPCHHGECVDGIATFICKCQP
GYMGPICSEQIRECQSDPCQNRGRCVDLVNMYQCNCQPGTTGVNCEINLDDCASNPCQHG
TCEDGINEYKCVCEPGYTGERCTEEINECSSSPCLSGGTCVDKVNGFQCLCPLGTHGPLC
HSGADHCSPMPCLHGDCNEQQDGYLCECDRGWEGKNCEREKNECQSNPCQNGGTCNDHLN
GYTCVCSRGFTGFNCEININECESNPCMNQGTCVDGVNSYTCYCSLPYTGRHCVEKLVPC
ASQPCQRRGRCQPSLDYTSYTCICHSGWEGAQCTEDVDECKKNPCQNGAHCVNTVGSYRC
ECQPGYSGVNCQTNIDDCSSNPCRNGGTCVDKVGRFLCECRAGFYGERCEEEVDECASNP
CWNGGHCSDYVNSYTCQCLPGYDGINCERDIPDCTETSCLNNGTCVDGINRFSCRCRHGF
SGQFCQFELNECDSHPCKNGGTCIDGLGTFHCTCPPMYKGKTCESMVNVCSQIKCLNGGT
CIQKEMDWRCSCQHGWTGLYCDIPNMSCQAVAISKGVAVDMVCKHAGRCMDKDNTHQCIC
QRGYMGSYCEEEMDECLSSPCRNGGTCKDYQGGYDCQCKAGYQGVNCEYDVDECQSNPCR
NGGTCIDLINRFSCACPPGTKGLQCEVDVDECAPEFGPRCKNGGQCVDGVGRYTCSCPPG
FTGVHCEGDVNECRSGPCNPSGTIDCVPLTNNYQCRCRLGYTGQRCELMVDLCQSKPCHN
NGRCAMNMSSVHGYSCTCPTGYTGFNCGNYELCASLHCQNGGQCVDIKGRPQCRCLTGFA
GPYCEITKKTCLCHNGGTCMPDDPNSCRCPPGFSGPTCQTIEPSCPYLDCKQRAGDKVCD
PQCKNQECEWDGGDCTLHWDKPWKNCQAPVPCWNLFHNGRCDPQCNNAGCLFDSFECQNR
SSASICKYDRYCADHYANGHCNQGCNTEACGWDGLDCATDTPPKLADGTLVIVVLLQPEE
LMGDLKGFLRSLGTLLHTNLRLKLDENQKPMVYPYYGTEQSEIQSGVAAMKQRGKRELEK
EVIGSKVHLEIDNRQCSQHSKECISSADQAAAFIAAEYLRSELPYPVYSVSSDKGTTDPL
PTALYLVAVAAAIILLILVLGVLAAKRKRKHGTLWLPDGFLAKNDTKRREPVGQDDFGMK
SMQKPQDGGLMDGSSTHHWSEEDHLSKKPRMEDKPLLPVGVDGGVDRREWTLQHHKAADI
TLTPPQADIDMDSMDVNVKGPDGFTPLMLASLRNGSSPDCGSMLGEEEEESGADEPGTNV
ITDLIGQGASLNAQTDRTGETALHLAARYARADAAKRLLDAGADANAHDNMGRTPLHAAV
AADAQGVFQILIRNRATDLDARMNDGTTPLILAARLAVEGMVEELVHCHADVNAVDDHGK
SALHWAAAVNNVEATLALLKNGANRDMQDNKEETPLFLAAREGSFEAAQVLLDHYSNRDI
TDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHSGPNHVGNGGHSSMVCGTNGTGFIMG
MRPGPQGKKNRRAGGKASAVSAGTAKDMKEMKAKRRKKPTGGEGPSVVAVPGAGGNVTKA
ASGLSESSVTMSPVDSLESPHSYAGEAVAASSTANSPPLLSSPSTRPMLPPVSHMLGQQQ
SWAGLAKHNYNNHMFGLMSAHQMSAGHTSMQQHHSPGMLTPMNVTMSREQLPPIVTFQMM
ATGNGQSLLKQAQQGQIQAQGQNQTQGQHLHCNQGMMFPIPDVGMQHGLPHTLPHPHAHN
HALPHGLPESQARQVASYQPRQSPVDKYPTPPSQHSYPTAGSEGTTPGHPAHNPSEHPYL
TPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNPRTLPPSCHTHIPEQAQLQPQSQAAQP
TQSQQSQRSSVYA
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atgggccaattacccggtgtctcttcgggcagagtcatccttcttgttatctgctccctt
aaaataacatatgctctgcagtgtgtggaccccgtgaagccctgtgtcaacaatgctacc
tgtgtcaccttccacaatggaacaggctactgcaggtgtgctcctggttttttaggcgag
tactgtcagcacaaggacccttgttatgtgggatattgtctgaatggaggagagtgcact
gtgagcgtggctggcgtacccgggagcccaagctgcgattgtcctctaggtttcgcgggc
cagcgctgcgagatccagaaaaactccacttgctaccccaacaacccttgcaacaatgag
gggaagtgctcgcttctccctaacgaccagtaccaatgcgtgtgtgcccgcggatggaca
ggtcagaattgtgagcaggaggacacatgtctgtctagcccatgtgccaacggtggtatc
tgccatgctctgcccaaccatgaattctcgtgtacctgtcctcctggttaccatggcgcc
cgttgtctcaatgacacagatgagtgtgccatctccccatctctgtgcaagagagaaggc
atttgtctgaacaccccaggctcatatcgatgtaactgccaacccggctttaccggaccc
cactgcgagaccgtttacgtgccttgctttccatccccctgcctcaatggtggaacctgt
cgacagatgacggacacgacttatgtatgccactgtctgccaggttttaatggaacaaac
tgtgaggtgaacattgatgattgtccaaatcaccgttgtcagaatggagctacatgcatg
gatggagtgaacacctacaactgccagtgcccacctgaatggactggtcaattttgcacc
gatgacgtggatgaatgcagactgcaacccaacacctgtcagaacggaggcacatgcagt
aacacgcgcaacggctacaactgtgtatgtgtgaatggctggagcggccctgactgctct
gaaaacattgatgactgtgcagctgagccctgcacctctggctccacttgcattgaccgc
gtggcttcgtttgtttgcagctgcccttctggcaagactggtttgctttgccacattgat
gatgcctgcaccagtaacccttgtaagatgggagctcaatgcgacacgaaccccgtcaat
ggaaagttcaattgtaactgcccctctgggtacaagggcagcacgtgtgcagaggatatc
gacgagtgtgtcatcgggccaaacccatgtgagcatggtggctcatgtaagaacacagag
ggctcgttctcgtgtaattgcgctccgggttacaccggtccacgctgtgagcaggacatc
aacgaatgtggctccaacccctgcctgaatgatgccacttgcttggaccagataggagat
tacacctgcatctgtatgccaggctttgatggattgcactgtgagattgacattaatgag
tgtgccagctcgccttgtctcaataacggtagatgtctagaccaagtcagccgtttcgtc
tgcgagtgtcctcaaggttttactggggaaatgtgtcaagttgacattgatgagtgtgcc
agcacgccgtgccataatggggccaagtgcctcgaccgtcctaacggctatgagtgtgaa
tgtgctgaaggtttcacagggccattgtgtatggaaaacattaacgactgtgaacctaaa
ccttgtcaccatggcgagtgcgtagacggaattgctaccttcatctgcaaatgccaacca
ggttacatgggccccatctgcagtgagcagatacgcgagtgccagagtgacccctgccaa
aacagaggacgctgtgttgacctggtcaacatgtaccaatgcaactgccagccgggcacc
acaggcgtgaactgtgagattaacctagatgactgtgccagtaatccctgccaacacggg
acttgtgaggatggaatcaatgagtacaaatgtgtatgcgaacctggatacacaggagaa
cgatgcactgaggagatcaacgagtgcagttcaagcccgtgtctgagcggagggacatgt
gtggacaaggtgaacgggtttcagtgtttgtgtccacttgggactcatggtcctctgtgt
cactcaggtgcagaccactgcagccccatgccctgcctgcacggagactgtaatgagcag
caggacgggtacctttgtgaatgtgaccgtggttgggagggtaagaattgtgagcgagag
aagaacgagtgtcagtccaacccgtgccagaatggtggaacctgtaatgaccatctcaat
ggctacacctgcgtttgttcccgtggatttacaggctttaactgcgaaataaacattaat
gagtgtgagtcaaacccctgtatgaatcagggaacttgtgtcgatggagtcaacagctac
acttgttactgctctctgccttacacagggagacattgtgtggagaagttagtcccctgt
gcatctcagccctgtcagagacgagggaggtgtcagccatccctggattacaccagctac
acctgtatttgccacagcggctgggaaggagctcagtgcacagaagatgtagatgagtgc
aagaagaacccatgtcagaatggagctcactgtgtgaacacagttggcagctaccgttgt
gagtgtcagcctggatacagtggtgtcaactgccagaccaacatcgatgactgcagctcc
aatccatgccgtaacggtggtacttgtgttgataaagttgggcggttcttgtgcgagtgc
agagctggtttctatggcgagcgctgtgaggaggaggtggacgagtgtgccagtaatccc
tgctggaatggaggccactgcagcgactatgtgaacagctacacatgccaatgcctgcct
ggatatgatggcatcaactgtgaacgtgatatcccagattgcactgagacctcttgtcta
aacaatggaacgtgtgtggatggaattaaccgcttctcttgccgctgtcggcatggattt
tcgggtcagttctgtcagttcgaactgaatgagtgcgactctcatccatgtaaaaatggc
ggcacctgcatagatggcctggggaccttccattgcacctgcccaccgatgtacaaagga
aaaacctgtgagtcaatggtgaacgtgtgcagtcagattaagtgtctgaatgggggtacg
tgcatccagaaggagatggattggagatgcagctgtcagcacggctggacaggcctatat
tgtgacatcccaaacatgtcctgccaggctgtcgccattagcaaaggtgtggcggtggac
atggtctgtaagcatgcaggaaggtgtatggacaaagacaacacacaccagtgtatttgt
cagagaggttatatgggcagttactgtgaggaggagatggatgaatgcctctccagcccc
tgcagaaacggagggacctgtaaggactaccagggtggatatgactgccagtgcaaagca
ggttatcagggtgtgaattgtgaatatgatgttgacgagtgccagtcgaatccctgtcgg
aatggaggcacctgcattgatttgatcaaccgcttctcctgtgcgtgccctcctggcacc
aaaggtttgcagtgtgaggtggacgtggatgaatgcgccccagagtttggcccacgctgt
aagaacggcggccagtgtgtggacggtgtggggcggtatacttgctcctgccctcctggt
ttcactggagtgcattgtgagggagatgtgaatgagtgtcgttctggaccttgcaaccca
tccggcaccatagactgtgtgccgctgactaataactatcaatgtcgctgtcgtctcggt
tatactgggcagcgctgtgagttaatggtggatctgtgccagtccaagccatgccataac
aacggcagatgtgctatgaacatgagttcagtacatggatacagctgtacctgcccaacc
ggttacactggcttcaactgtggcaattatgagttatgtgccagtttgcactgtcagaat
ggcggacagtgtgtggacataaagggtcgcccccagtgccgctgtcttacagggtttgct
ggaccgtactgtgagatcacaaaaaaaacatgcttgtgtcacaacggtggcacctgtatg
ccggatgatcccaacagctgccggtgtccaccaggcttcagtgggccgacctgtcaaacg
attgaaccctcctgcccctatttggattgtaaacagcgggcgggagacaaagtatgtgac
ccgcaatgtaagaaccaagagtgcgagtgggatggaggcgactgtacgctccattgggac
aagccctggaagaactgccaagcaccagtgccctgctggaacttgttccataacggccgc
tgtgacccacagtgcaacaatgcaggctgcctcttcgacagctttgaatgccagaatcgt
tcatcggcaagcatttgcaaatacgatagatactgcgcagatcattatgccaatggtcat
tgtaaccagggctgcaacacagaagcatgtggctgggatggtctggactgtgccacggac
actcctccaaagctagctgatggcacactggttattgtggtgctgttgcagcctgaggag
ctaatgggtgaccttaagggtttcttgcgctcattggggacgctcctgcacaccaacctg
cgactgaagctggatgagaatcaaaaacctatggtgtacccatactatggaactgagcag
agtgaaatccaaagcggtgtcgccgctatgaagcaacgtggaaaacgagagctagagaag
gaggttattggatcaaaggttcacctggagattgacaatcgacagtgttctcagcactca
aaggaatgcatctccagtgcagaccaggctgcggccttcatagcagccgagtacctgaga
tcggagctaccgtatcccgtctactccgtgagcagtgataaaggtacaactgaccctttg
cctactgctctgtacctggttgctgtggctgcagctattatcttgctgattttggtgctg
ggtgtactagctgccaagcgcaaacgcaagcatgggactttatggcttcctgatggcttt
ctagcaaagaatgacaccaagcggagagagccagtgggacaggatgactttggcatgaag
agcatgcagaagccacaggatggaggtttgatggatggcagctctacccatcattggtca
gaagaggatcatctatctaaaaaaccaaggatggaggataagccgttgcttcctgtcgga
gtggatggaggagtggacaggagagaatggaccctgcagcatcacaaagcagctgacatc
acgctcactccccctcaggcggacatagatatggacagcatggatgtcaatgttaaagga
ccagatgggttcactcctctcatgctggcatctctacgaaatggcagcagccccgattgt
ggcagcatgctgggagaggaagaagaggaaagtggtgctgacgagcctggcacaaacgtc
attaccgacttgattggccagggtgcgtcactcaatgcccagacagatcgcaccggagag
acagcacttcaccttgctgcacgatatgcccgagcagatgctgccaagagactgttggat
gctggcgctgacgccaatgctcatgataacatgggccgcacccctctacatgcagccgtg
gcagcagatgcccaaggagtcttccagattctgatccggaaccgtgccacggatcttgat
gctcgtatgaatgatggcaccacaccactcatcctggcagccagactggcagtagagggt
atggtggaggaacttgtgcactgccatgcagacgtcaatgcagtggatgaccatggcaag
tcggctttgcactgggcagccgctgtcaataatgtagaagccactctagcgctgctgaag
aatggagccaatcgagacatgcaggacaacaaggaggagacccccttgttcctggctgcc
agagagggcagctttgaagcggctcaagttcttctagatcattattcaaatcgcgatatc
accgaccatcttgaccgcctgcctcgtgatacagcgcaagaacgaatgcatcatgacata
gtgcgtctgctggaccagtacaacttggtgcacagcccacactccgggcctaatcacgtg
ggcaacggcggacactcttcgatggtctgcggaacaaatggcacaggattcatcatgggc
atgcgtccaggaccgcagggcaaaaagaatcgccgagccggaggaaaagcaagtgctgtc
tcagctgggacagccaaagatatgaaagaaatgaaggccaaacggcgaaagaagccgacc
ggaggagaggggccgagtgtggtggctgtgcccggagctggaggaaacgtcaccaaagca
gccagtggtctctcagagagctcagtcaccatgtcacctgtggattccctggagtcaccg
cactcgtacgccggagaggctgtggccgcctctagcacagcgaattctccccctctgctc
agcagcccgtcaacgaggcccatgttgccccctgtaagtcacatgttgggccagcagcaa
agctgggcaggtttggccaaacacaactacaataaccacatgtttggcctcatgtcagcc
caccagatgagtgcaggccacaccagcatgcagcagcaccacagcccgggcatgctcacc
ccgatgaatgtcaccatgagccgcgaacagctgccgcccatcgtcaccttccagatgatg
gcgacaggcaacgggcagagcctgctcaagcaggcgcagcaggggcagatacaggcacag
gggcaaaatcagacacaaggtcaacacctacactgcaaccaggggatgatgttccccatt
cctgatgtgggaatgcagcacggcctaccgcacacccttccgcacccccacgctcacaac
cacgcgcttcctcacgggctgccagagagccaggcaaggcaggtggcatcctatcagcca
cgccagagccccgtggataaatatcccacgccaccttcccagcacagctaccccacggcc
ggctctgagggaaccacccccggtcatcccgcacacaatcccagcgaacacccctacctc
accccctcgcccgaatcgcctgacccctggtcctcctcgtccccccactccaactcagac
tggtccgatgtcaccacaagccccacccctctaggaaacccccgcacacttcctccctcc
tgccacacacacattcccgaacaagcccagctgcagccccagtctcaggctgcgcagcca
acgcagtcccagcagtcccagcgcagcagtgtgtacgcgtag
DBGET
integrated database retrieval system
