Pimephales promelas (fathead minnow): 120482661
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Entry
120482661 CDS
T08155
Symbol
smarcad1b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1b isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120482661 (smarcad1b)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120482661 (smarcad1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
HHH_3
CUE
T2SSK
Motif
Other DBs
NCBI-GeneID:
120482661
NCBI-ProteinID:
XP_039533132
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MRRKKGQSASLHHVDPSEPDTIIPETPETKRPSRSSFSTALSDSDSDIEISGSSVMPVRQ
VERKKKASSSEDELSLSDEEEVTVVKIERRLKHNRTTRSTSKAPPTQQKGSQMVTNSAHP
SPLKTSRIAASDSAQERRQQQMCGASQESDSRKRRASEMDNSEEEEPEPGSKDQDRMLRK
LQRKFPHLNKNELRDVLQEHSWLIEDALETLRMFSDLVVESEDDASQVSTAAKRTRRVAN
TRQQAQVPQLSSPPQPKPRRPLDGTKTPQRSAKQSVVPKNVYVSSSEECSDSEASMVNVL
LDSDSDQSEESLSKLKSEILSFFQTASADELTLIAGCSLKKAQKITELRPFKRWKDLDDA
MHRGNGLSIELLAGCREVLKEREVVKGLMSKCEEISVKLIQDVTQMMNNGPGSMSQPQIL
TSTFQLKPYQLIGLNWLALLHQNKLSGILADEMGLGKTIQAISFLAYLYQEGNHGPHLIT
VPASTLDNWVRELKLWCPSFKVLVYYGSAEDRKYMRYEILNQIVDYNIIVSTYNLAIGNN
SDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAINAKYRLLLTGTPLQNNLLELMSLL
NFIMPSMFSSSTSQISKMFSMKSSEEQSSFERDRITQAKLIMKPFILRRVKSEVLKQLPA
KEEQVEFCAMSERQQELYDALFHKLKRSSNRERRELTNVMMQLRKMSNHPLLHRQHYTTE
KLKAMSKLMLKEPSHRDADPALVKEDMEVLSDFELHRLCQQYSALQEYQLDTEILLDSGK
LSLLAQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYIRLDGSTPMSDRIGLIDQ
FNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEGRCHRVGQTKTVKVI
KLISKDSIEDAMLRIGERKLKLEQHMTATSTEEDEEDTLPDDMTSLLKASLGL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaaagaaaggacagtcagcatccttacatcatgtggatccctcggagccagac
actatcattccagagactcctgaaaccaaacgtccatcaagatcatctttctccactgcc
ctttctgactctgactcggatattgagatatcaggcagttccgtgatgccagtcaggcaa
gtagagcgtaagaaaaaagcatcatcgtctgaggatgaactatcactgtctgatgaggag
gaagtaactgtagtgaagatagagagaagactgaagcacaacagaacaacaagatctacc
tcaaaagctccaccaacacaacagaaggggtcgcaaatggtgaccaatagcgcacacccc
tcccccctgaagacatccaggatagcagcgtccgattcggcccaggagaggagacagcag
cagatgtgtggcgcttcccaggaaagcgacagcagaaagaggcgggcttctgagatggat
aattcagaggaagaggagcctgagccaggatctaaagatcaggatcgtatgctgagaaaa
ctccagaggaagttccctcatctgaacaagaatgaactcagggatgtgcttcaggaacac
agctggcttattgaggatgccttggaaacactacgaatgttctccgaccttgtggttgag
tctgaggatgatgcctctcaagtatccactgctgccaaacgcaccagacgggtcgcaaat
acccgccaacaagctcaggttccccaactttccagcccaccccaaccgaaaccacgcaga
cctcttgacgggaccaaaacacctcagaggagtgcaaagcagtcggtagtcccaaaaaac
gtatatgtgagctcgtctgaggagtgcagtgactctgaggcctctatggtgaatgtatta
ctggactctgactctgaccaatcagaggagtctctatccaaactcaaatcagagatcctc
agcttctttcagaccgcttctgcggatgagctcactctcattgcaggatgctccttgaag
aaggctcagaaaatcacagagctgagaccctttaaaaggtggaaagacctggatgatgcc
atgcacagaggaaatggtctctccatcgagctgctggcaggatgtcgggaggttctgaag
gaaagggaagttgtgaaaggtctcatgagcaagtgtgaggagatatctgtaaaactgatc
caagacgtcacccaaatgatgaacaatggcccgggctctatgagccagccccagatcctc
actagcacattccagttgaaaccgtaccagctgattggactgaactggctggctttacta
catcagaacaaacttagtggaatcctggcggatgagatgggtttggggaagaccatccag
gccatctcgttcctggcatacctctatcaggaagggaaccatgggcctcatctgatcacc
gttcctgcttctacacttgataattgggttcgggaactgaaactttggtgccccagtttc
aaagtgcttgtatattatgggtctgctgaggatcgcaagtatatgcgctatgagatcctg
aatcaaatagtggattacaacatcattgtctccacttacaacctggctattggaaataac
agtgaccgcagcctgttctgcaagcttaagctggagtatgccgtgttcgacgaaggccac
ttgctgaagaacatgaactcgctgcgctaccgacacctcatggccatcaacgccaaatat
cgactgctgctcactgggaccccactgcaaaacaacctactcgagctcatgtccctgctc
aacttcatcatgcccagcatgttctccagcagcacttcacagatctccaagatgttctcc
atgaaatcttcagaggagcagagcagttttgagagggacaggatcacccaggccaagctt
atcatgaaacccttcattctcagacgtgtgaagagcgaggtcctgaagcagttgcctgcc
aaagaggagcaggttgaattttgtgccatgtccgagaggcagcaggaactctatgacgct
cttttccacaaactgaagcgctccagtaacagagaaagacgtgagctgaccaatgtgatg
atgcagctgagaaagatgtccaaccatccgctccttcaccggcagcattataccacagaa
aaactcaaagccatgagcaaactcatgctcaaggagccgagtcaccgtgacgcagatccc
gctctcgtcaaagaggacatggaggtgctctctgacttcgagttacaccgcctctgtcag
cagtattctgcactgcaggaataccaactcgacacagaaatactgctggactcggggaag
ctcagcctcctcgcacagctgctgaactccctgaaggagaagggtgatcgagtggtgctg
tttagccagttcacaatgatgcttgacattttggaggtgttcctgagacaccataagcac
agatacatccggctggacggttcaacacccatgagtgacagaattgggctgattgaccag
ttcaacacagaccaggacatatttgtgttcctgctctccaccagagctggagggctgggc
attaacctgacttctgccaatgtggtcatccttcacgatatcgactgcaacccttacaat
gacaaacaggcagagggccgctgccaccgggtgggacaaaccaagacggtgaaggtgatc
aagctgataagtaaggactccatagaggacgccatgcttcgaattggagaaagaaaactc
aaactagagcagcacatgaccgcaacttcaactgaggaggatgaagaggacaccttacct
gatgatatgacctcgctgctcaaagcttctcttggactctga
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