Pimephales promelas (fathead minnow): 120482711 Help Entry 120482711         CDS       T08155                                  Symbol si:ch211-106h4.9 Name (RefSeq) rab effector MyRIP isoform X1   KO K22237   Rab effector MyRIP Organism pprm  Pimephales promelas (fathead minnow) Brite KEGG Orthology (KO) [BR:pprm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pprm04131]     120482711 (si:ch211-106h4.9) Membrane trafficking [BR:pprm04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     120482711 (si:ch211-106h4.9) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rab_eff_C FYVE_2 DUF5054 Motif Other DBs NCBI-GeneID:  120482711 NCBI-ProteinID:  XP_039533219 LinkDB All DBs Position Unknown AA seq 1210 aa AA seqDB search MGTKLDLSGLTDLEAKHVMQVVQRDMQLRKTEETRLIEMKKALVEEGSRSVLLSRQHRFN ERCCIRCCSPFTFLLNPKRSCLDCCYNVCKGCCTYSKKDKGWLCSACQKTRLLKTQSLEW FYNNVRRRFKRFGSAKVLKNLYRRHAAERGVLAEPTEGSTCEESICNESSVYESDSTFYR QSEEHCMEETISVAMRVAEEAIDDAIAKAESQTDSQEKQNEANYLRENRAELIEELAKTI VQKIVHRRMDPSEIQSGCNLDLLPDQNNDGTSPDPTQSAFDAYLWRSYSAFCLLTDEKTD QHANTGSRPSASKSHALEMKKEETMPVQAMPSWRSVDRLDNSMLQSPDGNWIAYQSNLLS RPSLLTKRKSLVYSVLERESGVGSAYDEMGSETEPEANGGYGAALVEFRRKMSANKQLSY TESYSRQATLPLDAQAQTITAHTLNADTENSSGPDGPMPKSHKNMLPFLKRKVSLDQRRL SSARLSNIMDVNFNPGGAESSEDGLEDSRVKRSRRRRKNKREEAEWKGQSLAVPDSNSQL SDSLVKSRHVKQDLHGKRPCDHALEDDTSDTATPDILSSGAVTPDPFGPDLSSPINSNYR ALGVVGSLDQQLTFKLKELTSQVRETQLSSTEDELDRLEYQMWDEDDETKAGDEVMGDAL LKIEAVAKERSNEIEATHQVRRTEMLKENNLTSKLRKLTSQVSETLLSSTDDELDRFEHQ TVNEDTYQSMITEMLVVDDRTDGENILQSYKKPQNHVEKMVEKAEEERSEKKQKDNVAEQ EIRKQKDTQMSEEMSSGSQKRTPAEIGAQNEIASKRSEETKNKREVHTEKRKAEIKDMVE TENTEMIDHIEKRGQALSSELALNRFISEDGNMEFDRVIDAVAKALDDMEDNIEAYTREG GFLDREGSEVEKLEMMEEKENVTEQDMDGKTTFEVCFVGGQSKKMKEKGKINEFVALKNR SEYPEETEDKQCITSSEERVQRKDDLVKMKEQRNKDTIQHSAPSGQGEYLSPEEIYKDAY VLEKEKNLHFISSVLQQKYSAVSLRSITSEVLKVLNATEDLIHGSMGDGQSQTDRSDVSS IPPAEARRLDEQLSRLEENVYVAAGTVYGLEAELGDLEECARSIGGSTTESELAHLEDQV ASAAAQVQQSELQVSDISSRIAALKNAGLNVTPQTQFTKVKTVKTKTQTISSSRKLRRRL PAPPVQDKEV NT seq 3633 nt NT seq  +upstreamnt  +downstreamnt atggggactaaactggatctctctggtctgacggatctggaggctaagcatgtgatgcag gtggtgcaacgggacatgcagctgcgcaagacggaggagacgcggctcattgaaatgaag aaggcgctggttgaggagggcagtcggtctgtcctgctgtcacggcagcacaggtttaat gaacgctgctgcatccgctgctgttctcccttcaccttcctgctcaaccccaagcgttcc tgcctggactgttgctacaacgtctgcaagggatgctgcacctacagtaagaaggacaaa ggctggctgtgctccgcctgccagaagaccaggctactgaagacccagtcactggaatgg ttctacaataatgtgagaaggcgttttaaaaggtttggcagtgctaaagtgttaaagaac ctctacaggaggcatgcggccgagcgtggagtgctagcagagcctacagaggggagcact tgtgaggagagcatctgcaatgaaagtagcgtgtatgagagtgactccacattctacaga caaagtgaagagcattgcatggaggagactattagtgtggcaatgcgtgtggcagaagag gccatagatgacgccattgctaaggctgagagccagactgacagtcaagagaagcagaac gaagctaattatctgcgagagaatagagcagaactgatagaggaactggccaaaacaata gtacagaaaattgtccaccggaggatggatccttctgagattcagtctggatgtaatctg gacctgttgcctgaccagaacaatgatgggacctctcctgatccaactcagagtgccttc gatgcttacctctggaggtcttactcagctttctgtctcttgactgatgagaaaacagac cagcatgctaacaccgggtcaaggccttcagcttctaaaagtcatgctctggaaatgaag aaagaagaaacgatgcctgtccaggccatgcctagctggaggagtgttgaccgattggac aattccatgttacagagtcctgatgggaactggattgcttatcagagcaacttgctctct cgaccaagccttttaactaagcgcaaaagtcttgtctacagcgtcttagaaagggagtct ggcgtggggtcagcttacgacgaaatgggctctgaaacagagcccgaagctaatggaggc tatggcgctgcactagtagagtttcgtcgtaaaatgtctgccaataagcagttgagttac acagaatcctacagccggcaagcaaccttgcctttggatgctcaagcacaaactatcact gcacacaccttgaatgctgacaccgagaactcatcgggaccggatggaccaatgcccaag tcccacaaaaatatgctgcccttcctgaagagaaaagtgtcactagatcagaggcgactc tcatccgcccgcctctcgaacatcatggatgttaatttcaacccaggaggggctgaaagc agtgaggatggtctagaggacagcagggtcaagagatctcgacggaggaggaaaaataag agagaagaggcagagtggaaaggacagtctttggctgtaccggattccaatagccaactc tcagattctctggtgaagagtcgtcatgtgaaacaagacttgcatggaaaaagaccatgt gatcatgctctggaagatgacacttcagacactgctacccctgacatcttgagctctgga gctgtgacccctgatccatttggacctgatctcagttctcccattaattcgaactataga gcccttggtgtggttggatctttagatcagcagttgactttcaaactgaaagagctgacc agtcaagtgagagaaacacaactctcctccactgaggatgaattggacaggttggagtat caaatgtgggatgaagatgatgaaacaaaagcgggagatgaagtcatgggagatgcttta ttgaagattgaggctgttgcaaaagaaagatcaaatgaaattgaagccacacatcaagta aggagaactgagatgttgaaagaaaataatctgacttccaaactcagaaagttgaccagt caggtcagtgagacactactttcctccacggatgatgaactggacaggtttgagcatcaa actgtaaatgaagacacatatcaatcaatgataactgagatgctggtggtagatgacaga acagatggagaaaacatattacaaagttacaaaaaaccccaaaatcatgtagagaagatg gttgaaaaagcagaagaagagagatcagagaaaaagcaaaaggacaatgtggcagagcag gagattcgtaagcaaaaggatacacaaatgtcagaagaaatgagctctgggagccaaaaa cggacacccgcagagataggtgctcaaaatgagatcgctagtaagagaagtgaagagaca aagaacaagagagaagttcacactgaaaagagaaaagcagaaataaaagatatggttgaa actgagaatacagagatgatcgatcatattgagaagcggggacaggccttatcctctgaa ctggctttgaatagatttataagtgaagatggtaacatggaatttgatagggtcatcgat gctgtagcaaaggctttggatgacatggaagataacatagaagcttacactagggagggg ggatttttagacagggagggaagtgaggtagagaaactagagatgatggaagagaaggag aatgtaactgaacaagacatggatggcaagactacatttgaggtgtgctttgttggtgga caatcgaagaaaatgaaggaaaagggcaaaatcaatgaatttgtggcactaaagaaccgc agtgaatatcctgaggagacagaagacaaacaatgcatcacctcatctgaagagagagtt caaaggaaagatgacctggttaaaatgaaggagcagaggaacaaggacacaattcagcac agcgccccatctggtcagggggaatatctgtcaccagaggagatctacaaggatgcatac gtgctggagaaagagaaaaacctacattttatctccagtgtgctacagcagaagtactcg gctgtatcactgcgcagcatcacctccgaggtgctgaaagtactgaacgccactgaggat ctgattcacggatcaatgggagacggacaaagccaaacagaccgcagcgacgtctcaagc attccccctgccgaggccagaagactggacgagcagcttagcagactggaggagaacgtg tatgtggcggcaggtacggtgtacgggcttgaggctgaactgggggatctggaagagtgt gcgcgcagcatcggtggatccacaaccgaaagtgagctggctcatctggaggaccaggtg gcctctgcagcagcccaggtgcagcagtctgagctccaggtttcagacatttcctcaaga attgcggctctgaaaaatgcaggtcttaatgtaactccacagacacaatttaccaaggtc aagactgtaaaaaccaagacacaaaccatcagctcatctcggaaactgaggaggcgactg ccagcacctccagtacaagataaagaagtataa

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