Pimephales promelas (fathead minnow): 120483041
Help
Entry
120483041 CDS
T08155
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120483041 (ddx4)
Enzymes [BR:
pprm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120483041 (ddx4)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120483041 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
120483041
NCBI-ProteinID:
XP_039533828
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MDDWEEDQSPVVSSKSGFGLGSSSTGGGFKSFYTGSAGNEKNNEDGDSWRSNSGDGFRGR
GGRGGSRGGRGGFRNTFKSETDENGNEEGWKGGESRGRGRGGFRGGSRGGFRDGGNEETE
RRGFGKDGCENGNDGGWKGGEGRGRGRGGFRGGFSDGGDEETGKRGFGRGGFRGQNEEVF
SKVSTSDNTDQEAGENAGPKVVYVPPPPPEEESSIFAQFATGINFDKYDDISVEVSGSNT
PKAIMTFDEAGLCESLNKNVKKSGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFL
LPILQQLMADGVAASKFSEVQEPEAIIVAPTRELINQIYLEARKFAFGTCVRPVVVYGGI
NTGYTIREVLKGCNVLCGTPGRLLDIIGRGKVSLSKLRYLVLDEADRMLDMGFEPDMRKL
VGSPGIPPKEERQTLMFSATFPEEIQRLAAEFLKVDYLFLAVGVVGGACSDVEQTIIQVD
QFSKRDQLLELLKTTGTERTMVFVETKRSADFIATFLCQEKINTTSIHGDREQREREKAL
SDFRTGQCPVLVATSVAARGLDIEHVQHVVNFDLPSSIDEYVHRIGRTGRCGNTGRAVSF
FNPESDTPVARSLVKVLSGAQQTVPKWLEEIAFSAHGTTGFNPRGRTFASTDSRKGGSFK
AEEPAPAASNSASAAAADDEEWE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggatgactgggaggaagatcagagccctgttgtgtcctcaaaatcaggatttggtctg
ggctccagtagtactggtggagggttcaagagcttctacacaggaagtgcaggaaatgag
aaaaacaatgaagatggtgactcgtggagatcaaattctggtgatggattcagaggcaga
ggaggcaggggaggatcccgaggagggagaggtggcttcaggaacacctttaaatcagaa
actgatgaaaatggcaacgaagaggggtggaaaggaggtgagagccgaggaagaggtcgc
ggtggcttccgtggggggtctcgaggtggtttccgtgatggtggtaatgaagagaccgaa
agaagaggctttgggaaagatggttgtgaaaatggcaacgacggagggtggaaaggaggt
gaaggccgaggaagaggccgaggtggtttccgtgggggttttagtgatggtggcgatgaa
gagacggggaaaagaggcttcggaagaggaggtttcagaggccagaacgaggaagtgttc
tccaaggtctcaacatcagacaacacagatcaagaagctggtgaaaatgcaggacctaag
gtggtctatgtgccgccccctcctccagaagaggagagctccatatttgcacaatttgcc
acaggcattaattttgataaatatgatgatatttccgtggaagtgagcggcagcaatact
ccaaaagccattatgacctttgacgaagcaggactttgtgaatcactgaacaagaatgta
aagaagtctggatatgtgaagcctactcctgtccagaaacatgggatccccattatctca
gctggacgggatctaatggcttgtgcccagactggatcaggaaaaacggcggcgttcctg
ctgcccatcctgcagcagctcatggctgatggagtggcagcaagcaagttcagtgaggtg
caggagcctgaggccatcattgtggctcccaccagagagctcatcaaccagatctatcta
gaggccaggaagtttgcatttgggacctgtgtgcgccctgtggtggtatatggaggtata
aatactggatatactattcgagaggtgttgaagggctgcaatgttttgtgtgggacccct
ggaagattgctcgacatcattgggcgtggaaaggttagcttgagtaagctacggtatttg
gttctggatgaagcagaccggatgctcgacatgggcttcgagccagatatgcgaaagcta
gtgggatctccaggaattcctccaaaagaggagcggcaaaccctcatgtttagtgccacc
ttccctgaagagatacaaaggttggcagcagagtttctgaaagttgactacctcttcctc
gctgtcggtgtggtgggcggagcctgcagtgatgtggagcagaccatcattcaggtggac
cagttctccaagagggatcagctgctggaactgctcaaaactacagggactgaacgtaca
atggtctttgttgaaaccaaaagaagtgctgatttcatagcaacgtttctctgtcaagag
aagatcaatactacaagcatccacggtgaccgggagcagcgggagcgagagaaagctctc
agtgacttccgcacaggccagtgtccggtgctggtggccacatctgtcgctgccagaggc
ctggacatcgagcatgtgcagcatgtggtgaacttcgacctgcccagcagcatcgatgaa
tacgtccaccgcattggaagaaccggacgctgtgggaacactggtcgggccgtgtctttt
tttaacccagagtcagacactccagtagctcgctctttggtcaaagtcctttcaggggct
caacagactgttcccaaatggctggaggaaatagcgttcagtgctcatgggacaaccggc
ttcaacccacgcggaagaacgtttgcgtccacagactcgcggaagggcggatccttcaag
gccgaggagccggcgccggcagcatcaaactcagcgtctgccgccgcggccgacgacgag
gaatgggaataa
DBGET
integrated database retrieval system
