Pimephales promelas (fathead minnow): 120483049
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Entry
120483049 CDS
T08155
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120483049 (chd7)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120483049 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
120483049
NCBI-ProteinID:
XP_039533837
LinkDB
All DBs
Position
Unknown
AA seq
3124 aa
AA seq
DB search
MADPGMINLFGDDGNLFSDELEGLGDCGYPQGQANPMSQQMPHEHQGYGQLPSSLHLSSP
AVPGQAKLGHHFDHFNQYEQPKMHPMDQQGGRLMGNGPVNGMSSPHSRYHGAPPSAGGTA
GHHVYPGAQGDGRSQSFPDGGNVWGAQAMQVPEQTRPPFQQQPPQASSHQHGPAGPQGHT
HQMGPFIGRGDYAIQGHNQTQTPPRMNHFPQGLPQEANHFMGHMGITQNPGMSGPPMRHP
AQPPQQHQQPNQQFIHRPGQGPGHPESVASHNPQFPQSPSRQQQVMGGRPHQTMGFNMHN
QQVPSNTVNSSGQYPPYPSYSNLNQGLANTSGMSPNLSLTTSSNSNPNAPVTQVQRYPAP
TGPQRYPTAGAQQGPMHQQPIHVNQINTQPMHQAQNQSTAQQKLQQQLQTPPQGSYASPP
SMSPMRNLATPAGTPPPQQGRPPSAGLGTDVGSYPVVPHQSQGPMAHAQRGAGPMNAAQQ
HPHQQLPSHPSHPHPPPTQMYAALSPNHRSTSAQGRPPAGLGANHTEPMGPQDQRMLAQA
QRQQLQTPPLPFQQQQLQQVHTPPSIPPSQTHLGAHHQNSPPSQQAWPPPRQSPPPMQKV
PHMQHSPSDPSLEITSSKAPVSGPNLQPASCDIQQTESELKPKKKKKKKAKVSDGQEGND
ISGEAGGEVNKGDSLMTPVEQSAIEKKSKKKPKEKEPKEPKTPKTPKTPKTPKEPKEPKE
KKVKTTTLKPKSSKKPSVKKSDVESSNSTKKEAKRKREPSVTSDVEKTPPHSPEEEEDDG
VQKRRSSRQVKRKRYTEDLEFRISDDDGDDSPGPKSPTTSEQQELPDAEGPVVEKIMGMR
IGKKELSSGEEVEVEEFYVKFKGFSYLHCRWADIEELEKDKRIQQKVKRFKAKQALSNFL
SEIDDEPFNPDYVEVDRVLDVSESTDENGEPVTLYLVKWCSLPYEDSTWELKADIDQGKI
EDFERVMAREPEPKRVERPPTSDWQKSESSREYKNGNALREYQLEGVNWLLFNWYNTRNC
ILADEMGLGKTIQSITFLYEIYLKGIHGPYLVIAPLSTIPNWEREFRTWTELNVVVYHGS
QASRKTIQAYEMYYRDTQGRVIKGAYKFHAIITTFEMILTDCPELRSVPWRCVIIDEAHR
LKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPDRFPSESTFMLEFGDL
KTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNVQKKYYRAILEKNFAFL
SKSGGGGSGGGGGSNVPNLLNTMMELRKCCNHPYLINGAEEKIMEEFRESHPLDYPEFHL
QAMVQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRG
NLRQAAIDRFSRPESDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHR
IGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAANGVQQLSKKEVED
LLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIESEGKGSTFAKASFVASGNRTD
ISLEDPDFWQKWAKKAELDLDVINGRNNLVIDTPRVRKQTRHYSSMKEDDLMEYSELESD
SEDKPLQKPRRPQDRTQGYPRSECFRVEKNLLVYGWGRWGDILSHGRFKRPLRERDVETI
CRALLAYCLLHYRGDENIKSFIWDLITPTEDGQSRTLTNHSGLSAPVPRGRKGKKGKPQA
AQTHMPKADWLADCNPDILLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGDQADRILE
GTDSSELDIWIPQPFQADVPTDWWDLDADKSLLIGVYKHGYEKYNSMRADPTLCFLERVG
MPDAKAIAAEQRGADMMADGVEGEDEDPEYKPLRMPFKDDLDDFTNSPLDDKDEGMDGET
GEGPKPGENGKAGNLYWPPASALTARLRRLITAYQRTHKREQLRQEAMTKPDRRRRRPRD
DILAMVTEGGAYAPEGAVAFMAEGGPFMAKGSPYIPDSAALLADGAAYFKERRQRWTRRE
EADFYRVVSTFGVVYDVHRQCFDWSQFRAFARLDKKTDESLEKYYYSFVAMCKRVCRMQI
KSEIELPDPTLIIDPITEERASRTLYRIELLRRIREQVLPHPLLEERLSLCQPSPDLPAW
WEPGRHDRDLLRGAAKHGVSRTDYHILNDPELSFLEAHRKFTQGKGAEMPIMSEPLTPLT
VLKDDEVKEEHGDMMVPKVENSNLEVVKGEKSEALSPKKEEEEANDLSLKHEPKEEETEE
IDAMEVKTKVELDCPVDSMAKEKPIDQESTDTLPIPEDKITQDESEPPLNTETKVPIDKI
SEEDEEEKMDEDDKSEKSSQAEVGAASESKNFDEESNASLSTARDETRDCFSVDDVEPPA
SQMFSERSLFSFWPKDRVMINRMDNICEAVMKGKWPFNRRQFFDFPGLLPGYSSMTTDSP
LQRRSLGDLSMVGQTSYSGSEDLTMSPQVNKDETLSLSVPRQRRRRRRKVEIEAERAAKR
RNLMEMVAQLRESHATEGQTQAIDLTKALQGVSSSSSASAFPGAIASSAALKAQMELLQA
GASSRPRANGSLHDTELPNRRKRGRRKNVEGLELLFMGNKRGPLNVENSDGTKAFVDGRT
HRPISSPAQKAPGEGLEERSHLQGEDGPSTKDLREWLRQHPTYTMDVPGYVPKNEDHLLS
QFAKPKQKRHRCRNPNKIDINTLTGEERVPVVNIRNGRKMGGAMAPPMKDLPRWLIENPE
FAIAPDWTDIVKQSGFLPESMFDRLLTGPVVREEGVRRRGRRPKSEIAKATAAAQAAAAA
AASTSGVNPLLMNGLFGSMDLTSLQGLQNIQSLQLAAGLMGFPAALGGGADGKHAAAMLP
LMLPGMGGLPNMFSLGGLFGGSLAATATATNGASGTEQAESEENPNPKTDEETKEEGDEK
EKAEKLSEKESAEATGDAASLNAAAAAAAAAGMSTNPLAFNPFLLSTMAPGLFYPSMFLP
ASLGGLGLPGFPQASLADLQSAVSGALGAAGEDKESAKGPSSNQDQNASAADVETADNTL
EDSDSEESQNKTADSSVLDDDLAGPVEEMDSMEGGMDEDDDDDDDDDDDDEDDDEPADED
DKSD
NT seq
9375 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccaggcatgatcaacctctttggagacgatgggaatctgttctctgatgag
ttggagggcctgggggactgtggctacccccaaggtcaggcaaatcccatgagtcaacag
atgccccatgagcaccaaggctacggacagctcccctcttctcttcacctctcctcacct
gctgtccctggacaggccaagcttggccaccattttgaccactttaatcagtatgagcag
cccaaaatgcatccaatggaccagcaggggggccggttgatggggaatgggccagtaaat
ggcatgtcttcccctcattcccgctatcatggtgctccaccaagtgcgggagggacagca
gggcatcatgtctacccgggtgcacaaggagatgggcggagccaatcattcccagatggt
ggaaatgtgtggggtgctcaagcgatgcaggtgcctgaacaaactagaccacctttccag
cagcaacctccacaagcctcctctcatcagcatggccctgctggaccacaaggacacacc
caccaaatgggcccttttattggccgtggtgactatgccattcagggtcacaaccagacc
caaacacctcccagaatgaaccactttccacaaggcctccctcaggaagccaatcatttc
atgggtcacatgggtataactcagaatcccggcatgtcgggcccccccatgcgtcacccg
gcacagcctcctcaacagcatcagcaacccaatcagcagtttatccacagacccggccag
ggtccgggtcatccggagtctgtcgccagccataacccccagttcccacaaagcccttca
cggcagcagcaggtcatgggtggaagaccccaccaaaccatgggatttaacatgcacaac
cagcaagtcccttccaacactgtaaacagctcagggcagtaccctccctatccttcgtac
agcaaccttaatcagggattagccaacacttcaggaatgagtcccaacttgagccttacc
accagcagcaacagcaaccctaatgctcctgtgacccaggtgcaacgctaccctgcccca
acagggccccagcgctaccctacagctggggctcaacagggaccaatgcaccagcagccc
attcatgtgaaccaaatcaacacccagcctatgcatcaagctcagaaccagtctacagcc
cagcagaagctgcagcaacagctacagactccacctcagggatcatacgcctcccctcct
tccatgtcgcccatgaggaacctggccacccctgcaggcaccccacctccccagcagggc
cggccacccagtgctggtttgggaaccgatgttggcagctaccctgtcgtgccacatcaa
tctcaaggcccaatggctcatgcccagagaggagccgggccgatgaatgcagcgcagcaa
catccccaccaacagctaccatcacatccctcacacccacatcctcctccaacccagatg
tatgctgctttgtcacccaatcacaggtccacgagcgctcaaggaagacctccagcagga
ctgggtgcaaaccacacagagccaatgggcccgcaggaccagagaatgcttgctcaagca
cagcgccagcagctgcagacccccccattgcctttccagcagcaacagctgcagcaggtg
cacacccctccctctattcctccatcacagacacacttaggtgcacaccaccagaactcc
cctccatctcagcaggcatggccacctcctcgccagtcacctccaccaatgcagaaagtg
cctcacatgcagcattctccatcagacccttccctggagataacatccagtaaggcacct
gtctcgggcccaaacctccaaccagccagctgtgacatacagcagacggagagtgagctc
aagccaaaaaagaaaaaaaagaagaaagccaaggtaagtgacggccaggagggtaacgac
atcagtggtgaggctggtggagaggttaacaagggagacagtcttatgactcccgtggaa
cagtctgccattgaaaagaagagcaaaaagaagccaaaggagaaggaaccgaaagagccc
aagactcccaaaaccccgaagactcccaagacacccaaagaacccaaggaaccgaaggag
aaaaaagtgaagactaccaccctgaagcctaaaagctccaaaaagcccagtgtaaaaaaa
tctgacgtcgagtcaagtaacagcaccaagaaggaggcaaagcgcaagagagagccctca
gtcacatctgatgtggagaaaacaccgccacattcaccagaggaggaggaagatgatggc
gttcagaagaggcgatctagccggcaggtaaagaggaaacgctacaccgaggacctggag
ttcagaatttctgatgacgatggagatgattccccaggaccaaagtctccaacaacatct
gagcagcaggagttgccagatgcagagggccctgtggtggagaagatcatggggatgcgc
attggaaagaaagagttgtcatctggggaagaggtggaagttgaggagttttatgtcaaa
ttcaaaggcttctcctacctgcattgtcgctgggcagacatcgaagagctggagaaggat
aagagaatccagcagaaggttaagaggttcaaggccaagcaagccctcagtaacttcctc
agtgagattgatgatgagcccttcaacccagattatgtggaggtggacagggttctggat
gtgtctgaaagcacagatgaaaatggagagcctgtaactttgtacctggtaaagtggtgc
tccttgccttatgaggacagcacgtgggagttaaaagcagacattgaccaagggaagatt
gaggacttcgagagagtgatggcacgtgagccagagccaaagcgtgtggagcgacctcct
accagtgactggcagaaatccgagagttccagagaatataaaaacggcaatgcgctcagg
gaataccagctggagggagtcaactggctgctcttcaactggtacaacacacggaactgt
attttagctgatgaaatgggccttggcaaaacaatacagtccatcacattcctctatgag
atatacctgaagggaatccacggtccttacttggtgattgctcctctttccaccattcca
aactgggaaagggagttcaggacatggactgagctaaacgtagtggtctatcatggtagc
caggcaagccgaaagactattcaggcttatgagatgtactacagagacacacagggtcgt
gtaataaagggagcctacaaattccatgcaatcatcaccacgtttgagatgatcctgaca
gactgccctgagctacggagtgtgccgtggcgctgtgtgatcattgatgaggctcatagg
ctgaagaacaggaactgcaaacttcttgagggcctaaagatgatggacatggaacacaaa
gtcctgctgactgggaccccactgcaaaacacagtggaggaactcttcagtctccttaat
ttcctggagccagataggtttccttcagagtccaccttcatgctggagtttggagatctg
aaaacagaagagcaggtgcaaaagttgcagggcattctgaagcccatgatgctgcgccga
ctgaaggaggatgtagagaagaatcttgcaccgaaagaggagaccatcattgaagtggaa
ctgaccaatgtgcagaagaaatactaccgtgccatcttggagaaaaactttgccttcctt
tccaagagtggaggaggtggcagcggaggtggaggaggatccaatgttcccaacttgctg
aacaccatgatggagctgagaaagtgctgtaatcacccctacctcattaatggagccgag
gagaagataatggaggagttcagggagagtcaccccttagattaccctgagttccacctc
caggccatggtccaggctgcaggaaaactggtgctgatcgacaagctgctccccaaactg
aaggctgggggtcaccgtgtgctcatcttttcccagatggtgcgctgtctggacatcctg
gaggactacctcatccagagacggtatccatatgagcgtatagacggcagagttcgagga
aatctacgccaggcagctattgaccgcttctcacgaccagaatctgaccgttttgtgttc
ctgctgtgcaccagggctggaggcttgggtattaacttaactgcagctgatacgtgcatt
atatttgactccgactggaaccctcagaatgacttacaggctcaggctcgatgccacagg
ataggacagagcaaggctgtgaagatttaccgcctgatcaccagaaactcctacgaaaga
gaaatgtttgacaaggccagtttgaagttaggactagacaaggcggtgcttcagtccatg
agcgggagggagaatgctgccaacggggttcagcagctctctaaaaaggaggtagaggac
ctcctacgtaaaggagcttatggagctctaatggatgaagaggacgagggatcaaagttc
tgtgaagaagacattgatcagattttgcagagacgcacacagaccattaccattgaatca
gaaggcaaaggctcaacatttgctaaggcaagttttgtggcctctgggaacagaaccgac
atttctctggaggacccagatttctggcagaaatgggcaaagaaagcagagctggacctg
gatgtgatcaatggcaggaataatctggtgattgacactcctcgggtccggaagcagact
cgtcactacagttctatgaaggaggatgatttgatggagtattcagaacttgagagtgac
tctgaagacaagccccttcagaaaccgcggaggccccaggaccgaacccaggggtacccc
cgcagtgagtgctttagagtggagaagaatcttctggtgtatggctggggccgctggggt
gacatcctgtcccatggacgctttaaacgtccgctaagggagcgagacgtagagaccatc
tgccgagccctcctggcctactgtcttctccactaccgtggagacgagaacatcaagagc
ttcatttgggacctcataacccctactgaggatggtcagagccgcacactgaccaaccac
tctggtctgtctgctcctgtgccccggggccgtaaagggaagaaggggaagccgcaggct
gctcaaactcacatgccaaaggctgactggcttgctgactgtaatcctgacatcctcctt
caagaggatagttataagagacacctgaaacaccactgcaacaaagtgctgctgcgggtc
cgcatgctgtactatctgcgacaagaagtcataggagaccaggcagacagaatcctggag
ggaacagattcaagtgagttggatatctggatcccacaacccttccaagccgacgtaccc
actgattggtgggatctcgatgctgacaagtccctcctcatcggcgtctataagcatggc
tatgagaagtataactcaatgcgtgctgaccccaccctgtgtttcctggagagggtgggc
atgcctgatgccaaggccatcgctgccgagcagaggggagcggacatgatggcagatggt
gtcgagggtgaggatgaagacccagagtacaagccactccggatgcctttcaaagatgat
ctggatgattttacaaactctccactggatgataaagatgaagggatggatggtgagact
ggagaaggtcctaagcctggtgagaatgggaaggcaggtaatctgtactggcctccagcc
tcggctcttaccgcccgattgcgccgcctcatcacggcctatcagcgtactcacaagcgc
gagcaactaaggcaagaagccatgaccaaacctgaccggcgccggcgccgcccacgagat
gacatccttgccatggtaacagagggaggagcttatgctccagagggagcagtggctttc
atggctgaaggagggcccttcatggccaagggatcaccttacatccctgacagcgccgcc
ctgctggctgatggagcagcttatttcaaagagcgacggcagagatggacgaggcgtgaa
gaagctgatttctaccgggtggtgtccacattcggtgtggtttatgacgtgcacagacag
tgctttgactggtcccaattccgtgcttttgctcgtctggacaagaagactgatgagagc
ctggaaaaatattactactcttttgtggctatgtgcaagcgtgtgtgccggatgcagatt
aaatcagagatcgaattgcccgaccccactctcatcattgaccccattacagaggagcgg
gcttcacggacgctctatcgcatcgagctgctgcggcggatcagggagcaggtgttgcca
caccctctgctggaggagaggttgagtctatgccaacccagccccgacctccctgcctgg
tgggagcccgggcgccatgatcgagacctccttcgaggtgctgcaaagcatggtgtcagc
cgcactgactaccacattcttaacgaccctgagctgagcttcttggaggcccatagaaag
ttcacacagggcaagggtgctgaaatgcccatcatgtctgaacccctcacccctctgacc
gtgctcaaagatgatgaggtgaaggaagagcatggagatatgatggtgcccaaagtggaa
aacagtaacttagaggtggtcaaaggagagaaatctgaagccctgtctcctaaaaaggaa
gaggaggaagcaaatgatttgagtcttaagcacgagcccaaggaggaggagacggaggag
atagatgcaatggaggttaagaccaaggtagagctggattgtcctgtggatagtatggct
aaggagaagcccatagaccaggagtccacagatacactccctatccctgaggataaaatc
actcaagatgagagtgagcctcccttgaacactgagactaaagtacctattgacaaaatc
tctgaagaagatgaggaagaaaaaatggatgaggatgacaaatcagaaaaatcttcacaa
gctgaagttggagccgcctccgagagtaagaattttgacgaggagagtaacgcctccttg
agcactgcccgcgatgagaccagggactgctttagtgttgatgacgtcgagccgccagcc
tctcagatgttcagtgaacgctcactgttctctttctggccgaaggacagggtaatgatc
aatcgtatggacaacatctgtgaagcggtcatgaagggcaagtggcctttcaacaggagg
cagttctttgactttccaggcctgttgcctggctacagctccatgacaacggacagcccc
ctgcagaggcggagtcttggtgatctctcaatggtgggtcagacgagctatagtggcagt
gaggaccttaccatgtcaccacaggtcaacaaggatgaaactttaagcctgtcagtacct
cgacagcgcagacgcaggagaaggaaggtagagattgaggcagagcgtgctgccaagcgc
cggaacctgatggagatggtggcacagctacgagagtcccatgctacagaaggccagaca
caggccatagacctgaccaaagccctgcaaggtgtgtcgtcctcttcttccgcctctgcc
ttccctggagccattgcctcctccgcagccctgaaagcacagatggagctgctgcaagca
ggcgcttcctccagaccaagggccaacggctctctgcatgacactgaactccccaaccgg
agaaaaagaggtcgcaggaaaaatgtggaggggttggaactgctctttatggggaacaag
agaggacctctcaatgtggaaaattccgatgggaccaaagcttttgtagatgggcggaca
cacagacccatttcatctcctgcacagaaagcccctggtgaaggcctagaagagagaagc
catcttcagggagaagatggtcccagcactaaggacctacgcgaatggctgagacagcat
cccacctacactatggatgtgcctggatacgtaccaaagaatgaggaccacctcctctcc
cagttcgccaagcccaaacagaaaagacacagatgccgcaatcccaacaagattgacatt
aacacgctgaccggagaggagagagtccccgttgttaacattagaaatggaagaaagatg
ggtggagccatggcccctccaatgaaggatttaccacgctggctgattgaaaatccagaa
tttgccatcgccccagactggacggatattgtgaagcaatcgggctttctcccagagtcc
atgtttgaccgactcctgactgggccggtggtcagagaggagggcgtgcgccgcagaggc
agacgtcccaaatctgaaatcgccaaggcgacggcagcagcgcaggcagcggccgcagca
gcggcttccacatctggtgttaatcctttgctgatgaatggactgtttggcagtatggac
ctgaccagtctgcagggcctgcagaacatccagagcctccagctggcagctggtctcatg
ggctttcccgccgctcttggagggggagcggacggcaagcatgccgcggccatgctgcct
ctcatgcttcctggtatgggcggcctccccaacatgttcagtctagggggtctgttcgga
ggaagtctggctgcaactgcgactgcaaccaacggtgcgtctggtacagaacaggccgaa
tctgaggagaatcccaacccgaagactgacgaggagaccaaggaggaaggagatgagaag
gaaaaagcagagaaactgtctgaaaaagagtctgccgaggctaccggtgacgctgcttcg
ctgaatgctgctgctgccgcggccgctgctgccggcatgtctactaacccgctggccttc
aaccctttcttgctgtccaccatggccccaggccttttctacccatccatgtttttaccc
gccagccttggcggcctgggcctcccaggcttcccccaagcttctctagctgacctccag
agtgctgtgtctggggccttgggggctgccggtgaggacaaggagtcagccaaagggccc
agctcaaatcaggaccagaacgcctctgcggctgatgttgaaactgctgacaacacactt
gaagacagtgactcagaggagagccagaacaagactgctgattcatcagtactagatgat
gacctggcggggccagtcgaggaaatggactccatggaaggtggaatggacgaggacgat
gatgatgatgatgacgacgacgatgatgatgaggacgatgacgagcctgctgatgaggat
gacaaaagtgactga
DBGET
integrated database retrieval system
