Pimephales promelas (fathead minnow): 120483084
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Entry
120483084 CDS
T08155
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120483084
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120483084
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
120483084
NCBI-ProteinID:
XP_039533897
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MKGGGGGKEPPVEGEISGKRPKRKCLQWHPLLAKKAPDFSEEEEEEDEEELEKEPVLCTE
SVAQEGVCGGIEDDSEEYSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD
WWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPATNKPVKSPSHSVSNSRKKVWSLPS
NPNKDPSVAKKQAKTDSTPQLNFAMADPNKMGGLSMLLLAGEHALTAREISSSSSQTGCT
DVAKHTGKSALFQLAEISSSPVQPAGGSKNAEDTSSLTHVEASGPSQPSSPDLPKSCVKS
PLFQLAEQISSSRTQSASEGRQCGQSALFQLAEMCLASEAEKIEARSSQPSGGSSSLCAQ
HSSISTAIPDHEEQRDPPELPLTTSSSSTSGSTSSSPTDAIPSDISPCKTPKKKKKKKEN
KESDTNPPSPKKVKKRQSSESDLDSVMFTIEAVAKGTWGSEETPKKKARPSESESSPSTD
QSPSVKKKKSKPKKQLKSKDDATEEEEEGDEEADKPQDAEIKTEEAPLTPKAEFENEPDL
EEEPPSGLEDMEPHCSPLQPTELEEKDTDTKPPQTTQEDKDLEVKPENCGSRKSERSCKG
ALYKTLVSEGMLTSLRANVDRGKRGSMRGSVSDHEGSWNDESWGFSQAATSNPKKLKKSK
SKEETAQGLGKLEEEFEKKFNSLPQYSPLTFDKKSVAVTKKKKTSTSSPPEPPKPCKGPS
SSQKKTLFHKIVNKYKHRKEKSSGADKDLDTPEPMVTESSPVKSGSPCVSPSPEPQKVLD
TPVGSQKRKARKSKITHLVRTADGRVSPAEAEDKSKDQTKNQDEKPFTQETLCNSGVCYN
DPRSAEVDPPDTSGGLPAFFSLAALAEVAAMENVHRAQRAVSIPTEGQVKDMAPVLISCA
DQ
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtggaggtggagggaaagaacctcctgtggagggagagatcagcggaaagcgg
cccaaacgcaagtgtctgcagtggcacccgctgctggccaagaaagctccggacttctct
gaggaagaggaggaggaagatgaagaagagctggagaaggagccggtgttatgtacagag
agcgtcgctcaggaaggagtgtgtggtgggatagaagatgacagtgaagaatactcctct
gagcagcgggctcgtcggcccatgaatgcctttctgctgttctgcaaacgccaccgctcg
ctggtccgacaggagcatccgcgactagacaaccggggggccactaagatcctggcagac
tggtgggccgtactggaccccaaagaaaaacagaaatacacagacatggctaaggagtac
aaggatgcgttcatgaaagctaaccctggttacaaatggtgtcctgccaccaacaagccg
gtaaagagtccctcacactctgtgagtaactcccgtaagaaggtctggtctcttccctcc
aaccctaataaggatccttcagttgccaaaaaacaggccaaaactgacagcacaccccag
ctcaatttcgccatggctgatcccaataagatggggggcctaagcatgctgctgttagca
ggggagcacgcgctgaccgccagagagatttcctccagctcttcccagactggatgcaca
gatgttgctaagcacactgggaaatcagcccttttccagcttgctgagatttcttccagt
ccagtgcagcctgctggaggaagtaagaacgctgaggacacgagctctctcacacacgta
gaggcctctggaccatcccagccaagctcacctgacctgcccaagagttgtgttaaatca
cccctgtttcagctggctgagcagatctcctccagtaggactcagtcagcatctgaggga
aggcagtgcggccagtcggctcttttccagctcgctgagatgtgtttggcctctgaggcg
gagaagatagaagctcgatcctcccagccctctggtggatcctcctctctctgtgctcag
cacagctcaattagcacagccatcccagaccacgaagagcagcgggaccctccagaactt
cctctcaccacatcgtcatcctctacctccggctccacctcatcctcccctactgacgca
atcccttctgacatcagcccttgtaagacgccgaagaagaagaaaaagaagaaagaaaat
aaagagtctgacacaaatcctccatcacccaaaaaggtaaagaagcgccagtcgtccgag
tcagacctggacagcgtaatgttcacaattgaagcggtcgcaaaaggtacttggggctca
gaagagacacccaagaagaaagctcgtccctcagagagtgaaagcagcccctctacggac
caatctccatctgtgaagaagaaaaagtctaaaccgaaaaaacagctcaagtcaaaagac
gacgccacagaagaagaggaagaaggggacgaagaggctgataagccacaggatgcggag
ataaaaactgaggaagctcctttgacccctaaagctgagtttgagaatgaaccagacttg
gaggaggagccccctagtggcctggaggacatggaaccacactgctctcctctgcagcca
acggaactggaggagaaagacacagacaccaaaccacctcaaaccacacaggaagataaa
gaccttgaggttaagccggagaattgtgggtccaggaagtctgagcgaagctgtaaagga
gcgctttacaagactctggtgtctgaagggatgctcacatcactgagagcaaacgtagac
agagggaaaagaggttccatgcgaggcagtgtgtctgatcatgagggcagctggaatgat
gaaagttggggattttctcaagctgcgaccagcaacccaaaaaagctcaagaagtccaag
tctaaagaggaaaccgcccagggactaggaaagcttgaggaggagttcgagaaaaagttc
aacagcttaccgcagtacagccccctgacatttgacaaaaagagtgtggctgtcaccaag
aagaaaaaaaccagtacatccagccctcctgaaccacccaaaccttgcaagggtccatct
tcatctcagaaaaagaccttattccacaagatagtgaacaagtacaaacacaggaaggag
aaatccagtggcgcagacaaagacctcgacacacctgagcccatggttacagaatcaagt
ccagtgaagtcgggcagtccgtgtgtgtctccctctcctgaaccccagaaggttctggac
acacctgtgggcagtcagaaaaggaaggccaggaagagtaagatcacacacttggtgcgc
acggccgatggtcgagtgtcacctgcagaggcagaagacaaatctaaggatcagaccaag
aatcaggatgaaaagccattcactcaagagacattatgcaatagcggggtctgctacaat
gaccccagatcagcggaagtggacccaccagatacgtccggtggcctcccggccttcttc
agcttagctgctctcgctgaggttgcagccatggagaatgtgcacagagcccagcgtgct
gtgagcatccccactgaaggtcaagtgaaggacatggctcctgtgctgatttcctgcgcg
gaccagtga
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