Pimephales promelas (fathead minnow): 120483113
Help
Entry
120483113 CDS
T08155
Symbol
smarcd3a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120483113 (smarcd3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120483113 (smarcd3a)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120483113 (smarcd3a)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120483113 (smarcd3a)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120483113 (smarcd3a)
PBAF complex
120483113 (smarcd3a)
GBAF(ncBAF) complex
120483113 (smarcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
120483113
NCBI-ProteinID:
XP_039533935
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MDMEDSAGGARKATKSKLFEFLVHGVRPGMTSGARMPHQGAPMGPPGPPYGGTPPIRPGM
PNPALDPNRKRPAPTQPVQPPPVQNRPRKKPLGFPATNEISVRQMDMREAQSDPAIGSNA
KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLR
LYISNTYNPAKPDAEDSEGSIASWELRVEGKLLDDPGKQKRKFSSFFKSLVIELDKDLYG
PDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQ
TRSCIIQALWQYVKTNKLQDPHEKEYINCDKYFQQIFDCPRLKFCEIPQRLTNLLLPPDP
IVINHIISVDPNDQKKTACYDIDVEVDDPLKSQMNGFLLSTANQQEIASLDNKIHETIES
INQLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKLMTDTAGNPEEERRAEFYNQPWSQEA
VSRYFYCKIQQRRQELEQALALRTT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggacatggaggattctgccggaggagctcgtaaagccacgaagagtaaactgtttgag
tttctcgtccatggagtgcgtccagggatgacctcaggggcacggatgccccatcaagga
gctcccatggggcctcctggacctccatatggaggaacaccgcccattcgaccagggatg
cctaacccagccctcgaccccaaccgaaaacgtcctgccccgacccagcccgtgcaacct
ccccctgtccagaaccgtcccagaaagaaaccacttggatttccagcaacaaatgagata
tccgtgagacagatggacatgagagaagcccagtcagatcctgcaattggatccaatgcc
aagagaagaaaaatggccgacaagattctccctcagaggatccgtgaactggtgccagag
tcccaggcgtacatggacctcctggcctttgagcgcaaacttgaccaaaccattatgagg
aagagggtggatatacaggaagccctcaaaagaccaatgaagcaaaaacgcaagctgcga
ttatacatttcaaacacttacaaccctgccaaacctgatgcagaagactcggagggcagc
attgcatcctgggagttgcgtgtagagggcaagttgttggatgatccaggaaaacaaaag
aggaagttttcatctttctttaagagccttgttattgagctggacaaggatctatacggc
cctgacaaccacttagtggagtggcaccgcacggctacaacccaggagaccgatggcttc
caggtgaagaggcccggtgatgtgaatgtgcgctgtactctcttgctcatgctggattac
cagccccctcagtttaagttggatcctcgcctcgcacgtctccttggcattcacactcaa
acccgctcctgcatcatccaggcattatggcagtacgtcaagaccaacaagctgcaggat
cctcatgaaaaggagtacatcaactgtgataaatattttcagcagatctttgactgtcct
cgtctaaagttctgtgagatccctcagcgactaaccaacctgctgctgccgcctgatcct
attgtcatcaatcatattattagtgtggatccaaatgaccagaagaagacagcctgctat
gacattgatgttgaagttgatgatcctcttaagagtcagatgaatggattcttgctgtcc
acagccaatcaacaagagattgcatccctagacaacaagattcatgaaactatcgagtcc
atcaaccaacttaagatccaaagggatttcatgctcagcttctccagagaccccaaaggc
tacatccaggactggatctgctcgcagaaccgggatcttaagctgatgacagatacagct
ggtaatccagaggaagagaggagagcagagttttataaccagccctggtcacaggaagct
gtcagtcgctacttctattgcaagattcaacaacgaagacaggagctcgaacaagcttta
gcactgcgaaccacttaa
DBGET
integrated database retrieval system
