Pimephales promelas (fathead minnow): 120483235
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Entry
120483235 CDS
T08155
Symbol
ykt6
Name
(RefSeq) synaptobrevin homolog YKT6 isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04130
SNARE interactions in vesicular transport
pprm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120483235 (ykt6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120483235 (ykt6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120483235 (ykt6)
Membrane trafficking [BR:
pprm04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
120483235 (ykt6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
120483235
NCBI-ProteinID:
XP_039534126
LinkDB
All DBs
Position
Unknown
AA seq
198 aa
AA seq
DB search
MKLYSLSILYKGSTKSNLLKAAYDLSSFSFFQRSSVQEFMTFTSALIVERSPLGSRASVK
EQEYLCHVYVRNDNLSGVVIADGEYPSRVCFTLLDKVLDEFSRQVNSIDWPSGSQASVQY
TALDSHLARYQNPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctacagtctgagcatcttgtataaaggctcgacgaagtccaacctgttgaag
gcggcgtacgatctgtcatcattcagtttcttccagagatccagtgttcaggagtttatg
acgttcaccagcgctctgattgttgagcgttcaccattaggaagtcgtgcgtccgtcaaa
gagcaagagtacttgtgtcacgtgtatgtgcggaatgacaatctcagtggcgttgtgatc
gcagacggagaatatccctccagagtctgtttcactttacttgacaaggtgctggatgag
ttctccaggcaggtgaacagtatagactggccttctggatcacaggcgagtgttcagtac
acagcgctggacagtcatctggccagataccagaatccacgtgaggcggacgctatgacc
aaagtgcaagctgaactggacgaaaccaaaattattttgcacaacacgatggagtcgctg
ctggagagaggagaaaaactggatgacttagttcagaaatcggagcatttgggaaaccaa
tcaaaagccttttataaaacggcacgcaagcagaactcatgctgtgaggtcatgtga
DBGET
integrated database retrieval system
