KEGG   Pimephales promelas (fathead minnow): 120483356
Entry
120483356         CDS       T08155                                 
Symbol
ubap2l
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
pprm  Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pprm04121]
    120483356 (ubap2l)
   03400 DNA repair and recombination proteins [BR:pprm03400]
    120483356 (ubap2l)
Ubiquitin system [BR:pprm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    120483356 (ubap2l)
DNA repair and recombination proteins [BR:pprm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120483356 (ubap2l)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 CUE GIP1_N UBA_8
Other DBs
NCBI-GeneID: 120483356
NCBI-ProteinID: XP_039534250
LinkDB
Position
Unknown
AA seq 1212 aa
MMTSVGGSRARGNWEQTQGQTQSQSQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLV
DITGKDQDESMIALHDCNGDVNRAINILLEGSPDTDSWEMVGKKKGVSGQKESTQTEGGD
EGKENRDRGGERDVARRRGGAPRRGRGASRGREFRGQENGLDGAKAGGVTGRGMERGRRG
RGRGRGGAGRRGGRFSAQGMGQIDKGPRYDLSGDESTFNPADYTEPAQTEESYTSGSTWS
NTGNLEPEDGNRLEFTGGEGTNYPRKFDSTPGAWRTATEEWGTEDWNEDLSETKIFTASS
VASMPIPQENVTITAGQRIDLAVLLGKTPPSSSTEAEPASLEGPQPPSLSQSLVFSNSKQ
TASLSQSSSSVPYSQHSMVSMLGKGFGDVGDPKVTTGGSTTGSQFLEQFKTAQALAQLAA
QHSQSGPPNAGPSTWDTSPTTLGQYDIKAQTEPVHNPFTKRQPYQPTSTSSSMMDAFLQN
KATPTSTTSALLPQSTQSSSLPQAITTPVSKPSGPAPGQQNSSSPADPQASSPLPLQQHK
LKQQKKRASITTKIPAQAVEMPGSADISGLNLQFGALQFGSEPVLPEYDTSAAVVTTTPG
NQGQNSLYTSASNEQATALSNPNQMELYEPRASQTRRYPPSVSSSPQKDMQAKNGFSSIQ
TSQSLEAAAGSAVPMKPVSESVVPPSVSNITSLADPSSGPPSLLTTSNQTPLSALGHEDA
SSSSLAPQHNNSHPTQQNSLAPSVRTSNSSLLHPSVDADSSLHSSFSSVSVAQSSVPPPS
SATSAAPISHSIPVAPSSSVSSVSAQSALGPVSNLTMGLNSVAGVASMVPPLAAASSSAA
SATLAPSSVSLSRSTAASGKAPPNLPPGVPPLLPNPYIMAPGLLHPYPPQVYGYDDLQML
QTRIPLDYYSIPFATPTTALTGREGGLTSNPYSAGDLSKFGRGDASSPAPATTLAQPQQT
QTQTHHTAQQPFLNPALPPGYSYTSLPYYTGVPALPNTFQYGPAMFPVAPTSSKQHGVNV
GVNASATAFQQASGYGSHGYNTGYEDLGQASAGSGDFCKGGYGTAVAAAAAAAAAAAASA
QNKPANSVTGPGVGVSVTSSNTGVPDISGSVYTKTQSFEKQGFHTGTPSASFSLPSALGS
GGPINPPTAAGYAPAPYMHILTPHQQPHSQMLHHHLQQDGQGGSGQRSQNASIQQKSQIN
KSGYNSYNWGGN
NT seq 3639 nt   +upstreamnt  +downstreamnt
atgatgacttcagtgggcggaagccgggcccggggcaactgggagcagacgcagggtcag
acacagagccagtcacagcacaagcagaggccccaggccactgctgagcagatccgactc
gcgcagatgatctcggaccataatgatgcagactttgaggagaaggtcaaacagctggtt
gacatcacaggaaaggatcaggatgagtccatgatagcgcttcatgactgcaatggagac
gtcaacagagccatcaacatcctgttggagggcagccctgacactgactcttgggagatg
gttgggaagaaaaaaggagtttcaggtcagaaggaaagcacacagacagagggaggagat
gaaggaaaggagaatcgagatagaggaggagaaagagatgtggcacgtcgcagaggaggg
gccccgcggaggggccgtggagccagtcgcggacgagagttccgtgggcaggaaaatggg
ttagatggggccaaggcaggtggagttactggcagaggaatggagcgaggccgtcgggga
aggggcagaggaagaggtggagctggaagacgaggagggaggttttcagctcagggcatg
ggccagattgataagggccccagatatgatttgtcaggagatgagagtacgttcaaccca
gcggactatactgagccagcccaaacagaggagagctacacaagtggaagcacttggagt
aacacaggcaacctggaacctgaggatggaaaccggctcgagtttacaggtggagaggga
acaaactatcctcgcaagtttgactccacccctggtgcatggagaactgcaacagaagag
tggggcacggaggactggaatgaggatctgtcagagaccaagatattcactgcctccagt
gtggcgtccatgcccattccacaggagaatgtcaccattacagctggacagaggattgat
ttggcggtgttgctggggaagacgcctccctcatcttccacagaggcagagcctgcttcg
cttgaaggcccgcagccgccatctctgtcgcagtctctggtgtttagcaactcaaagcag
acagcatcactgtctcagtcctcctccagtgttccttacagccagcacagcatggtgagc
atgcttggtaagggtttcggtgatgttggcgatccaaaagtcaccactggaggctccacg
actggttctcaattcctggagcagtttaagacggcccaggctttggcccagcttgcggcc
cagcactcacaaagtggaccgccaaatgctggtccttcgacctgggataccagccccact
acactgggacaatacgatataaaagctcaaacagagcctgtgcacaaccccttcaccaaa
cggcagccctaccaacccacctccacttcctcctccatgatggatgccttcttgcagaac
aaagccacgcccacttctaccacctcagctctgctccctcagtccacccagtcatcttca
ctgccccaggccatcaccacccctgtctccaaaccctcgggacctgccccaggtcagcag
aactcttccagcccagccgacccgcaggcgtccagccccctccccctgcagcagcacaaa
ctcaaacagcagaagaagagggcttccatcaccaccaagattccagcccaagcggtggag
atgccaggatctgcggatatatccgggctcaacctacagtttggagcattacagttcggc
tctgaaccggtgcttcctgagtatgatacctcggcagctgtcgtcacgacgacaccaggc
aaccaaggccagaacagcctttacacaagtgctagcaatgagcaagcaacagccctctcc
aaccctaatcagatggaactatatgagccaagagccagccagacacggcgctaccctcct
tctgtgtcctcctcaccacagaaagacatgcaggcaaagaatgggttcagttcaatacag
acgtcacaatctctggaagctgcagcaggctctgcagtgcccatgaaaccggtgtccgaa
tcagtcgtcccaccatcagtttccaacataacctcattggctgacccctcatcaggtcct
ccttccctgctgactacatccaatcagacgcctctcagtgctctcgggcacgaagatgcc
tcttctagctcactggcccctcaacacaataactcccaccctacacagcaaaacagtttg
gcaccttcagttcgcacttcaaactcaagtctgctgcacccaagtgtagatgctgattcc
agcttgcactcatccttctcctcggtatctgtggctcaatcttcagttcctccaccctct
tcagctacttcagcagcccccatctcccacagcatccctgttgccccatcttcatctgtc
agttcggtctcagcgcagtccgccctgggccccgtcagcaacctgaccatgggattgaac
agtgttgccggtgtggcttcaatggtaccccctttggctgctgcatcttcatctgctgcc
tcggccactttggcaccttcatccgtctcgttgtctcgcagcacggctgcctcagggaaa
gcgcctccaaacctgcctcctggagtgccgccactgctgcccaacccttacataatggct
cctggcctgcttcacccatacccacctcaagtttatggctacgatgacttgcagatgttg
cagaccaggataccactggactactacagcatcccatttgccactccaaccacagcactg
actggcagggaaggcggtttgacgagcaacccttattctgctggcgacctgtcaaagttc
ggccgtggtgatgcctcatctcctgcccctgccaccacgctggcccagcctcagcagacc
cagacacaaacacaccacactgcccaacagcccttcctcaacccagcccttccaccagga
tacagctacaccagcctgccctattacactggtgtgcccgccctgcccaacaccttccag
tacggccctgccatgtttccggtggctcctacctcctccaaacagcacggtgtgaatgtc
ggtgtcaatgcatcagctacagccttccagcaggctagtggttatggatcacatggatat
aacactggctatgaggatttgggccaggcttcggcagggagcggggatttctgtaagggc
ggctacggcactgccgttgccgcagccgctgctgccgccgccgccgccgctgcttctgcg
caaaacaagcccgccaactctgtcaccgggcccggagtgggagtctcggtgacatcaagc
aacacgggagtccctgacatttcagggtctgtttacacaaagacacagtcttttgagaag
cagggtttccacacaggaacccccagcgcttccttcagtttgccctcagcacttgggagt
ggcggccccatcaaccctccgactgcagcgggttacgctccggccccttacatgcacatc
ctgaccccccatcagcagccacactctcagatgctccaccaccacctgcagcaggacgga
cagggtggctctgggcagcgcagtcagaacgcctccattcaacagaagtcgcagatcaac
aagtcgggatacaacagctacaactggggaggcaattaa

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