Pimephales promelas (fathead minnow): 120483394
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Entry
120483394 CDS
T08155
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120483394 (snx13)
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120483394 (snx13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
NCH1
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
120483394
NCBI-ProteinID:
XP_039534300
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MVLHHPCLQCDPSGALSNWKQASLSIWGWGGLGVVLFLISFGPFAIFYLAFYILCFIGGG
FVVLLLFGKTNSEKHLERCEHSYLPPTQAAILKVSEEMKSESKPIKIDRRLTGSNIIDEP
LQQVIQFALRDYIQYWYYTLSDDETFLLEIRQTVQNALVQFSTRSKEVDWQPYFTTRLVD
DFATHLRVFRKAQERLNEREDPKQRDDPEELLDSFFEAEVEMERNICRDMVCMSRKDEEG
YLRDLCEVLLYLLLPSGDFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRD
SSCNYEAFMNILKLTDKPPELEAVKDRVLEELQHLRSLDTGADDINIIKNQINSLLFVKK
VCETRIQRLQSGKEVDALKLAANFGKLCVIPLEHILVHNIALQFFMDYMQHMGGQAVLFF
WLTVEGYRVTAQQQLEVLQSSQRDGKKPSSQTTKGLLRAAAVGVYDQYLSEKASPRVEVD
EASVSRLAQKLSKEDPTPEIFDEIQRKVYDMMLKDERYYPSFRQHPLYVRMLAELDMLKE
PSFRGSDDGDGESFNGSPTGSINLSLDDLISGSVDESAQLHAFISDTGVCNDHGKTYALY
TVTVVRKNSDGSEDVWKTYRRYSDFHDFHMRITEQFESLGPILKLPGKKTFNNMDREFLE
KRKKDLNSYLQLLLNPEMVKACHMLMPYIYDFLENKPYSKGKGDFARKMDTFVNPLRSSM
RNVSNAVKSLPDSLAEGVSKVSADMGQDFKKIGQDIKQSIFKVPPLIQKSDIDPEHCRVS
AQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIKATYGDTINRKIVDH
VEYMTSPEQVSDYVKRFRDSYWPNGILAETPPRRDKSLRMRTRVAAKTTLLGIMPDELKH
IIGADTTRKGILRVFDMFQHQSLNRRLVYVFLEGFLETLFPQYKFPDLFVKLHSRSPRVL
KYSLKSRGLHKR
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggttcttcatcacccctgtctgcagtgtgacccgagcggggctttgagcaactggaaa
caggccagtctgtccatctggggatgggggggtctgggagtcgtcctcttcctcatctca
tttggaccctttgccatcttttatctggccttctacatcctctgtttcattggcgggggt
tttgtagtgctgcttttatttggaaagacaaactcagagaaacacctggaaaggtgcgag
cactcctacctgccacctacacaggcggccatactgaaggtttcggaggagatgaaatca
gagtccaaacccatcaagatagaccgtcgtctgacaggatccaatatcatagatgagcca
ctgcagcaggtcatccagtttgctttgagggactatatccagtattggtactacacactg
agtgatgatgaaacgttcctcttggagatccgtcagactgtccaaaacgccctcgtccag
ttctccaccaggtctaaagaggtggactggcagccgtatttcaccaccagattggtggat
gattttgcgactcacctgcgtgttttcaggaaagctcaagagaggctgaatgagagagaa
gatccaaagcaacgtgacgatccagaggagctgctggactcgttttttgaggcggaggtg
gaaatggagaggaatatttgtcgagatatggtgtgcatgtcacgcaaggatgaagaaggt
tacttgcgggatctctgtgaagtgctgctgtacctgctgttgccttctggagatttccac
aacaagaatatgagatacttcctcagggaagttttggccagaggagttctgctgcccttg
attaaccagctcagtgacccagattacatcaatcagttcgtcatctggatgattcgggac
tcgagctgtaactatgaggccttcatgaacatcttaaagctgacggacaaaccgcccgag
ctggaggccgtcaaagaccgagtcctggaggagcttcagcatctccgatctctggacacg
ggcgcagacgatatcaacataataaaaaatcaaatcaatagtttgctttttgtgaagaaa
gtctgtgaaacacggatacaaaggctacaatcaggaaaggaagttgacgctttgaaactc
gcagctaattttgggaagttgtgtgtgataccgttggagcatatcctggtgcacaacatc
gccctgcagttcttcatggactacatgcagcacatgggcgggcaggcggttctgttcttc
tggctgacggtggagggttaccgggtcacggcacagcagcagctggaggtcctacagagc
agccagagagatgggaagaagccgagcagccagacgaccaaagggcttctgagagccgct
gcggtgggcgtctacgaccagtacctgtctgagaaggcctctcctagggtggaggtggac
gaagcgtccgtaagcagactggctcagaaactcagcaaagaggatcccacacctgagata
tttgatgagatccagagaaaggtgtatgatatgatgttgaaggatgagaggtattacccg
tcttttaggcagcacccgctgtatgtgcggatgctggccgagctggacatgctgaaggaa
cccagcttcaggggatctgacgatggggacggagagtcattcaacgggtctccgacagga
agcattaatttatcattagatgacctcatcagtgggagcgtggatgagtctgctcagctt
catgcctttatctctgacacaggcgtttgtaacgatcatgggaagacttacgcgctctac
accgtcaccgtcgtacgcaagaactcggacggcagtgaggacgtctggaagacgtatcgc
cgctacagtgattttcacgacttccacatgcgcatcacagagcagtttgagagccttggt
ccgattctcaagcttcctggcaaaaaaacctttaacaacatggacagggagtttttggag
aaaaggaagaaggacctgaactcatatttgcagctgctgttgaatcctgagatggtgaag
gcctgtcacatgctgatgccctacatctatgacttcctggaaaacaaaccctacagcaaa
ggcaaaggagattttgcacgcaagatggacacgtttgtgaatcctctccggagctccatg
cggaacgtgtccaatgccgtgaagtcactgccggacagcctggccgagggagtgtccaaa
gtctcggcggacatgggccaggattttaagaaaattggccaggatattaaacaatccata
tttaaggttcctcctttaatccaaaagtctgacatcgatcccgaacactgccgtgtctcg
gcgcagctggacgacaacgtggacgataatattcctctgagggtgatgttgctgttgatg
gacgaagtgtttgacctgaaggagagaaatcagtggctgcggagaaacatcaaaaacctc
ctccagcagctcatcaaggccacgtatggagacaccatcaacaggaaaatcgtggatcat
gtcgagtacatgacctcgcctgagcaagtgtctgattatgtgaagagattcagagactct
tattggccgaacgggattctcgccgagacgccgccacgcagagacaaaagcctccgtatg
aggacgcgggtcgccgccaaaaccacactcctgggcatcatgccggatgagttgaagcac
atcatcggggcggacaccacgcgcaagggcatcctgcgtgtcttcgacatgttccagcac
cagtctctgaaccggcggctggtctacgtctttctagagggcttcctggagaccttgttt
cctcagtacaagttccccgatctgttcgtgaagctccactcgcgctcgccgcgcgtactc
aaatactcactcaaatcgcgcggcttgcacaagaggtga
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