Pimephales promelas (fathead minnow): 120483454
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Entry
120483454 CDS
T08155
Symbol
snrpd1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120483454 (snrpd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120483454 (snrpd1)
03032 DNA replication proteins [BR:
pprm03032
]
120483454 (snrpd1)
Spliceosome [BR:
pprm03041
]
Complex A
U1 snRNP components
Sm proteins
120483454 (snrpd1)
U2 snRNP components
120483454 (snrpd1)
Complex B
U1 snRNP components
120483454 (snrpd1)
U4/U6.U5 tri-snRNP components
120483454 (snrpd1)
Complex C
U2 snRNP components
120483454 (snrpd1)
DNA replication proteins [BR:
pprm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
120483454 (snrpd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
YomU_Tube
Hfq
SM-ATX
API5
AAA_RNF213_3
Motif
Other DBs
NCBI-GeneID:
120483454
NCBI-ProteinID:
XP_039534432
LinkDB
All DBs
Position
Unknown
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSI
RGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgtcaggtttttgatgaaactgagccatgaaacagtcaccattgagctgaag
aatggcacacaggttcatggcaccattacaggtgtggatgtcagtatgaacactcacctc
aaagctgtgaagatgaccctgaaaaacagagaacccactcagctggagtccctcagtatc
cgcggcaacaacatccgctatttcatcctgccggacagtcttcctctggacacgctgctg
gtcgacatcgagccgaaagtcaagtcaaagaagagagaggctgttgctggccgcggtcga
ggaagaggacggggtcgtggcagaggaagaggacgtggtcgcggtgggccgaggagatga
DBGET
integrated database retrieval system
