Pimephales promelas (fathead minnow): 120483569
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Entry
120483569 CDS
T08155
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120483569 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pprm01007
]
120483569 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprm03016
]
120483569 (farsb)
Enzymes [BR:
pprm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
120483569 (farsb)
Amino acid related enzymes [BR:
pprm01007
]
Aminoacyl-tRNA synthetase
Class II (U)
120483569 (farsb)
Transfer RNA biogenesis [BR:
pprm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120483569 (farsb)
Prokaryotic type
120483569 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
120483569
NCBI-ProteinID:
XP_039534621
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MPTVSVKRDLLFEALGQTYTDEEFDELCFEFGLELDEITSEKEILSREQGDEKAEGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKERMEAPRYKCVSPANGGEPQRLVITEETASVR
PHAVAAVLRNITFTQERYDSFIELQEKLHQNVCRKRTLVAIGTHDLDTISGPFTYTAKAP
ADIRFKPLNQSKEYNATEIMSLYKTDSHLRHYLHIIENEPLYPIIYDSNGVVLSMPPIIN
GNHSKISLNTKNVFIECTATDLTKAKITLDMIVTMFSEYCEDPFTVEAAEVVYPDGRLCV
YPELAYRTETLSGDFVNKKVGINESAESIAQLLTRMCLRSEVSGEGDHIQVEIPPTRSDV
IHACDIMEDAAIAYGFNNIVRSTPRTYTVANQLPLNKLTELLRQDLAAAGFTEALTFALC
SQEDIADKLGKNIAEIKAVHISNPKTAEFQVARTSLLPGLLKTVAANRKMPLPLKLFEIS
DVVLKDDTKDVGARNNRRLCAVYYNKSPGFEVIHGLLDRVMQLLDVKPGRNQGYHIQAAE
DSTFFPGRCAEIFSRGKSIGHLGVLHPDVINRFELTMPCSAIDIDIEPFL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgccgacagtcagcgtgaagagagatctgctctttgaagctctgggacaaacatacacg
gatgaagaatttgatgaactgtgtttcgagtttggcctcgagctggacgaaatcacgtca
gagaaggaaatcttaagccgtgagcagggagatgagaaggccgagggggcgtctgatgtt
gtgctgtataagatcgacgttccagccaaccgctatgatctgctgtgtctggagggtctc
gtcaggggtctgcaggtcttcaaggagaggatggaagctccccggtataaatgtgtgagt
ccggcaaatggaggagagcctcagcggctggtcataacagaggagacggcgtctgtgagg
cctcacgctgtagccgctgttctgcgcaacatcactttcactcaggagcgatacgacagc
ttcatagagctgcaggagaaactgcaccagaacgtctgcaggaaaaggacgctggttgcc
ataggaactcatgatttggacaccatctccggtccattcacttacacagccaaagcgccc
gcagatatccgcttcaaaccactcaatcagagcaaagagtacaacgccactgagatcatg
agtctctataagactgacagtcatctgaggcactacctgcatatcatcgagaacgaacct
ctctaccccatcatttatgacagcaatggagtcgtcctgtcgatgccgcccatcatcaac
gggaaccacagcaaaatctcattaaacacaaagaatgttttcattgagtgcacggccaca
gacctcacaaaggcaaagatcacgctggacatgatagtgaccatgtttagtgaatactgc
gaggacccgttcacggttgaggcagctgaggttgtttatcctgatggcagattgtgtgtg
tatccggagctggcgtacaggacggagacactgtctggggacttcgtcaacaaaaaagtt
gggatcaatgaatcagcagaaagcatcgctcagctgctgacccggatgtgtttgaggtca
gaggtcagcggcgagggcgatcacatccaggttgagatcccgcccacacgctccgatgtc
atccacgcctgtgacatcatggaggacgctgccatagcgtacggcttcaacaacatcgtc
aggagcacgccacgcacgtacacagtagccaatcagctccctctaaataaactgacagag
ttactgaggcaagacctagcagccgccggcttcactgaagctctgacattcgctctgtgt
tcacaagaagatatcgcagataaacttgggaaaaacatagcagaaatcaaagcagtccac
atctctaacccaaagaccgcagagtttcaggtggcgcgcacctctcttcttcctggcctc
ctgaaaacggtcgctgccaacaggaagatgccccttcctctgaaactgttcgagatttca
gacgtcgtcctgaaggatgatacaaaagacgtaggagcccgtaacaacaggcgtctctgt
gccgtttactacaacaagagcccggggtttgaagtcatccacggactcctggaccgggtc
atgcagctgctggatgtcaaaccaggccgtaaccaaggataccacatccaggcggcagag
gactccaccttcttccctggccgctgcgctgagatcttttcacgtggcaaaagcatcgga
cacctcggggtccttcaccctgatgtcatcaatcgttttgagctgaccatgccttgctct
gccatcgatattgacattgagcccttcctgtga
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