KEGG   Pimephales promelas (fathead minnow): 120483615
Entry
120483615         CDS       T08155                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120483615 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pprm03041]
    120483615 (sf3b4)
Spliceosome [BR:pprm03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120483615 (sf3b4)
 Complex B
    120483615 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    120483615 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 120483615
NCBI-ProteinID: XP_039534692
LinkDB
Position
Unknown
AA seq 396 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINYASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSMPTPVMTAMGAGMPMPGMPPP
GAFPPVPPPGTMPPGMPPGMMPPAPGGPSQQGGGHPPGPPPFPPGAMHPPGMPPMPMPPS
GPPGMVPPPPGPPGSSQQRAPTPPGMPPPPMGVPPRGPFGPPMGMHPGMRGPPPMPPPGY
GAGPPRPPHFGFQRGPPLPPRPPAPPRGPMRAPMPP
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggcggcgggaccgatttcagaacgaaatcaagatgccactgtatatgtgggtggtctt
gatgagaaggtctcagagcctcttctgtgggagctttttctgcaagctggtcctgtggta
aacacgcacatgcccaaagacagagtaacaggacaacaccagggttatggctttgtggag
ttcctcagtgaagaggatgcagactacgccataaagatcatgaacatgatcaaactatac
ggcaagcccatacgagtcaacaaggcttcggcgcacaacaagaacctcgacgtcggcgcc
aacatcttcattggcaacttagaccctgaaatcgacgagaaactcctttatgatactttc
agtgctttcggtgtgatccttcagacaccgaagatcatgagagacccggacacaggcaac
tcgaagggttatgctttcatcaactatgccagttttgatgcctccgatgcagctatcgag
gccatgaatggccagtatctctgcaatcggcccatcacggtttcatacgcctttaagaag
gactcaaagggcgagaggcacggctcagctgcagagcgtctcctggccgcccagaatcca
ctttcacaggccgatcggccccatcagcttttcgcagacgccccaccgcctccctccatg
cccacacctgtcatgaccgccatgggtgcagggatgccaatgccagggatgccgcctcct
ggagctttcccacctgtccctcctcctggcaccatgccacctggcatgccgcctggtatg
atgcctcctgcgccgggtggtccttcacaacagggtggagggcacccaccgggacccccg
cccttcccccctggagcaatgcacccaccaggaatgccaccaatgccgatgcctccgtcg
ggacctcccggaatggtgcctcctcctcctggcccgcctggatcttctcaacaaagagca
ccaactccacctggcatgcctcctccccccatgggtgtccctcccagaggaccattcggt
cccccaatgggaatgcatccaggtatgagagggcctccaccaatgccacccccaggttat
ggtgccggcccacccagaccaccacacttcggctttcagagagggcctcccttgccgcct
cgtcctcctgcgccgccgaggggtccaatgagagcaccaatgcctccctaa

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