Pimephales promelas (fathead minnow): 120483669
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Entry
120483669 CDS
T08155
Name
(RefSeq) DENN domain-containing protein 3-like
KO
K20162
DENN domain-containing protein 3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120483669
Membrane trafficking [BR:
pprm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
120483669
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
dDENN
Beta-prop_LRRK2
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_TEP1_2nd
SPA
uDENN
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Ribosomal_L36e
Motif
Other DBs
NCBI-GeneID:
120483669
NCBI-ProteinID:
XP_039534766
LinkDB
All DBs
Position
Unknown
AA seq
1281 aa
AA seq
DB search
MADKSPSGLLEACVVAGVSNERLKELCLGKDVLVEAEVLQVHAPPFVTKDSSSNGVNQDH
ALAFSRAQRRRSFKKRDRPVSTISESGKLSESAVPVSDDLSVPQNIDLIALQQLCFPGGL
RITNECGGDSYHFLVFTDVFGTQTHGVVAQFCKPIQFQQDNMMHKNQSTKLQRLYTTYSI
CVISKYPYYNALRDCLSCFLLQLKTSRMTEFEEQVKEFSAKLALVPIPPPGPLHVVFNLR
PLQIELPSRLDVDRPVLDLDLHLPFLCFKPKQILQIIGCILMEQRLVFLSTDWAKLTLVA
ECFMIYIHPLRWQHPFVPVLSCQMLDFIMAPTAYLMGCHTHHFQEVAEEIDDLVLIDIDQ
GTVSSSSSDRLNLPDVPLAARDCFIYRASSLQLHYDLDLCHAGSRTDIHELRAHRRRWQH
EVNSVILNVSMELIVNIFSEVCEFLNYEHRVFNSEEFLRSRETTDHKFYKRVLDTHIFHS
FLRDRLNRKNDAFTRMQMNIRTETRRLRTMAECPRRPTMEEANRKTFRLENGLNNRLGKS
MPNLADHRLFTLPVRQISVGTMSLQSGSWGPSRPIRTFNLPEFPPPLSYQYVQKYYVDLI
GQLSRAISMATPDDSALLARYYYLRGLVNSVAGRRVDALGDFQSLYKTDMDIFPAELLNA
LVESLPGNERKLAEQRPDLKRLISRVKKDNERELAQPMDGGTVKRFELPKKHLHVEDFVR
CVQESGIVKDLGTIQRLFEALTVGVEASSQSVFYLAVDGQQKQVDPEIFRFFYSFWKETE
AAAQDVDLPAVALEHLESGECVYKLSSSVKTSHGVGKIAMTKRRLFLLTEGRPGYVEVTK
FRDIEDVKISSAPFLLLRIPSLKIRTSIRKESFEVNLKSECDLWHLMIKEMWAGRKMADD
HKDPQFMEQALTNALLMDAVVGSLQSQKAIYAASKLAYFDKMKFEVPMMVPKTTSETLKH
KINPSLDQTSPQAVDVLLYTPGQLGVSELDGGANPKLWCALSDGKVLVFDAASWSMQQNS
VQVGTSRLNCMLAVNQQQLWIGSKDSFIYIINPRSVSCNKQLTEHRGEVTGLALEERTDK
FSQTVAYSCGEDGSVIVWDVSALQVRRQFRVSCDRLQSIQIHDGMLWCCGRDCVMEVRRN
GTVHRKMSLPDHLLSSPRGFSSFLLFNESEQLWAGFADAGELCVWHCRNLNKPIIRIQLK
DCAGVVCMIKVKSQIWVGCHGRSAAGKARGKIYVVNTDRYTVEKELVAHTDSVQTLCSAE
DRYVLSGAAQDDGKIGIWKVE
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaaagcccgtctggtctactggaggcgtgtgtggtggccggagtatcaaac
gaacgcctgaaggagttatgcctaggtaaagatgtgctggtggaggctgaggtgctgcag
gttcacgctccaccgtttgtgacgaaggacagttccagtaacggtgttaatcaggatcac
gctctggccttcagcagagcccagcggagacgctccttcaagaagagggaccgacccgtt
tcaaccatcagcgaatccggcaaactcagcgaatcggcagtccccgtctcagacgatctc
agcgtaccgcagaacatcgacctcatagccctgcagcagctctgcttcccaggtggtttg
agaataaccaatgagtgcggaggagactcctatcacttcctggtgttcacggatgtgttc
gggacccagactcatggggtggtggctcagttctgcaaacctatccagttccaacaggat
aatatgatgcataaaaatcagtcgaccaaactgcagcgtctgtacaccacatacagcata
tgtgtcatctccaaatatccatattataatgccctcagagactgtctgtcctgtttcttg
ctccagctgaagacctcccgcatgaccgagtttgaagagcaggtgaaggagttttccgcc
aaactggccctggttcccatcccgcctcccggacccctgcatgtggtgtttaatctcaga
ccccttcagattgaacttccctccagactggatgtggatcggcccgtgttggacctcgat
cttcacctgccgtttctgtgtttcaaacccaagcagatcctgcagatcatcggctgtatc
ctgatggagcagaggctggtgttcctgtccaccgactgggccaaactcacgctcgtcgcc
gaatgcttcatgatctacatccacccgctgcgctggcagcatccgttcgtacccgtcctg
tcctgccaaatgctggacttcatcatggctcccacggcctacctgatgggctgccacaca
caccacttccaggaggtcgcggaggagattgatgatctggttcttatagacattgaccaa
ggaacggtgtcgtcttcaagctcagacagacttaatcttccagatgtgccactggcagcc
agagattgttttatataccgagccagttcgcttcagcttcactatgatctggatctgtgt
cacgccggcagccgaacggacatccacgagctgcgcgctcacaggagacggtggcaacac
gaagtcaacagcgtcatcctgaacgtcagcatggagctcatcgtcaacatcttcagtgaa
gtgtgtgaattcctgaactatgagcatcgtgttttcaacagcgaggagttcctccgctcc
agagagaccacagatcacaagttttacaaaagggttttagacactcatatattccactca
tttctgcgggaccgtttgaacaggaagaatgacgcatttactcgcatgcagatgaacatc
cgtacagagactcggaggttgaggaccatggcggagtgtccacgcagacccacgatggag
gaggccaaccgcaagaccttcagactagagaacggcctgaacaacaggctggggaagagt
atgccaaacctggcggaccaccgattgtttactctcccggtccgacagatatcagtcgga
acaatgtctttacagagcggttcctggggtccctctaggccaatcagaacctttaatctc
ccagaattccctcctccgctgtcctatcagtacgttcagaagtactatgttgatctcatt
ggccagttgagcagagccatctccatggcgaccccagatgactccgccctgctggcccgt
tactattaccttcgaggcctggtgaactcagtggccggcagacgcgtggacgccctcgga
gacttccagagcttgtataagacagacatggacatctttccagccgagctgctgaacgca
ctggttgagtcgctaccagggaacgagagaaagttggccgagcaacgccccgatttgaag
cgtctgatcagccgggtgaaaaaagacaatgagcgtgagctggcgcaaccgatggatggc
gggacggtgaagagattcgaactgcccaagaaacacttgcacgtggaggactttgtgcgg
tgcgttcaggagtccggcatcgttaaggatctgggaaccatccagaggctgtttgaggcg
ctcactgttggtgtggaggcctcgtcccagtctgtattttaccttgccgtggacggccag
cagaagcaggtggatccggaaatcttccgcttcttctacagcttctggaaggagaccgag
gccgcggctcaagacgtggacttgccggccgtcgcgctggaacacctggagagcggcgag
tgtgtgtacaagctctcgtcatccgtgaagaccagccacggcgtgggaaaaatcgccatg
accaagcgcaggctcttcctgctgaccgagggccggccgggatacgtcgaggtcaccaaa
ttcagagatattgaggatgtgaagatatcttctgctcctttccttctgctgaggatcccg
tcgctgaagatcagaacgtccatcaggaaggagtcgttcgaggtcaacctgaagtcggag
tgtgacctctggcacctgatgatcaaagagatgtgggccgggaggaagatggccgacgat
cataaggaccctcagttcatggagcaggccttgactaacgccctgctgatggacgccgtg
gtcgggagcctgcagtcacagaaagccatctacgccgcgagcaaactggcctacttcgac
aaaatgaagtttgaggtgcccatgatggtccccaaaaccacatctgagaccctcaaacac
aagattaacccgtctctggaccagacgtctcctcaagcggtggacgtcctgctctacacg
cccggtcagctgggtgtgtcagagctggacggcggggcgaacccgaagctgtggtgtgct
ctgagcgatgggaaggtgctggtgttcgacgccgccagctggtccatgcagcagaactct
gtgcaagtgggaacgtcccggctgaactgcatgcttgcagtgaaccagcagcagctgtgg
atcggctcaaaggattcgttcatttacatcataaacccgcgaagcgtttcgtgcaataaa
cagctgacagagcatcgcggcgaggtcaccggactcgccctggaggagcgaaccgacaaa
ttcagtcagacggtggcgtactcgtgcggggaagatggcagcgtgatcgtgtgggacgtg
tccgctctgcaggtccgacggcagttcagagtctcctgtgacaggctccagtccatccag
atccacgacggcatgctgtggtgctgtggccgtgattgtgtgatggaagtgcgcaggaac
ggcacggttcatcgtaagatgtctcttccagatcacctgctgagttcaccgaggggcttc
agcagtttcctgctctttaatgagtcggagcagctgtgggccggtttcgcagacgcaggc
gagctgtgtgtgtggcactgcagaaacctgaacaaacccatcatcaggatccagctcaaa
gactgcgccggtgtcgtctgcatgatcaaagtcaagagtcagatctgggtgggttgtcac
ggccgcagcgccgcaggaaaagcccgcgggaagatctacgtggtgaacacggaccgctac
acggtggagaaggagctggtggcgcacaccgacagcgttcagacactgtgctcggcggag
gatcgatacgtgctcagcggagccgcgcaggacgacgggaaaatcggcatctggaaagtt
gagtag
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