Pimephales promelas (fathead minnow): 120484095
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Entry
120484095 CDS
T08155
Symbol
toporsb
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120484095 (toporsb)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120484095 (toporsb)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120484095 (toporsb)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120484095 (toporsb)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120484095 (toporsb)
UBL E3 ligases
120484095 (toporsb)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120484095 (toporsb)
Cilium and associated proteins [BR:
pprm03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120484095 (toporsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-RING_5
RING_XB3-XBAT31
zf-ANAPC11
zf_PCFS4
zf-RING_6
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
120484095
NCBI-ProteinID:
XP_039535049
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MMAPTKMKLRVRKKDSVGKSSQRLLANASPDSKCPICLDGFNNVASLDRCLHQFCFRCIH
EWSKNKAECPLCKQPFHSIYHSVKGEKDFKEFVVPPMENGAAANATASNAPQRVLRPRAL
RGRERRSHRAQQPVPSSSPPMEDVMFGGLTDAAALTENQDVQQMVLRLTARRQGRGEGRS
LRRLRDQDVVSFRRALYRTGVRVRNTRDVGRQRDISASFLRQNPGCLRRLLPWLQRELTV
LYGSHGSLVNIVQNIIISRIMNYNMEDSAIRDELRPFLLARTDHFLHELVSFARSTLNME
TYDQQAIYDCPAPSYEEGSSSDLSVIAISEDDDDDDNDSEDNVTENPSAVQEHLASVANA
SGVESLLSQSAWDDETPGPSYSTLFPSSSQSQDEEAEPSSSTAPPYSGPDCPAASSSVSA
GRGEDNEEEECLIVGYVKPMAERTPELVQLSSDSSEEEQEAADTKTPTTVTKSETSQMEL
PSQSHMNLRVPSLSPGLAPSCSPQRTHSESLSRERKTDYLSCRAHPSNDGSDLRQNRDDT
ELIAHERRKDSHQRSINKEKAKRSEKSWHDKTPDCSPIQTRSPPSWSGQSPTVSVWSGSP
VSGSNGSDCSTSLNNTSLEHSCHVREKLSQSPSYSRKRKIKENKSRSPDLNSFLNSHHPR
ESHRCRKRRKRAISSSSADSQSERSCLDKPSGKRKYKTRHLERAAQRLHEDGTATKEKRR
RRSRERSPSVEIIYERRAPEPHWHQRKKKKKKHRKRKRELRSPTVITIDSDSDRTIDCLD
RVMDIIDQTAADVEPRDGTPGQDMIQNLSCTLASSNPQSESSSPVADPTTERTLNLDDYV
VDVVDRSSSDCSRNLDESSHEEFVPNPFPMASMSPAPPSDTRLLETILQDLEEFLPEART
SPYASSHVQQERASIPRKDQSDTRGVTENLEKKNTDGDGPQEAVTDIAS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcccactaagatgaagttgcgtgtgaggaagaaagacagcgttggcaaatct
tctcagcgtttattggccaacgcgtcgccagactccaaatgccccatctgcctcgacggc
ttcaataacgtggcgtcgctggaccgctgcctgcaccagttctgcttccgctgcatccac
gagtggtccaaaaacaaagcggagtgtccgctgtgcaagcagccgttccactccatatac
cactcggtcaaaggggaaaaagattttaaggaatttgtggtgccgccgatggagaatgga
gcggcggcgaacgccacagctagcaacgccccccagcgcgtgctacgcccccgagccctt
cgaggcagggagaggcggagccacagagcgcaacaacccgtcccttcgtcttccccaccg
atggaggacgtcatgttcggcggtctcacggacgcggcggcgctaacggaaaaccaagac
gtgcagcaaatggtgctacgactgacggcgcgcaggcaagggcggggcgaggggcggagc
ctgcgacgcctacgggaccaagatgttgtctcgttccggcgtgcgctttacaggactggc
gtacgtgtgcgtaacacgagagacgttggtcggcagagggatatttcagcgtcgttctta
cggcaaaaccctggatgtttgcggcgactcttgccttggctgcaacgcgagctcacggtg
ttgtacggatcgcacggatcgctggtgaacatcgtgcagaacatcatcatctcgcgcatt
atgaactataacatggaggactcggccattcgggacgagctccgccccttcctgttagcg
cgcactgaccacttcctgcacgagctggtgagtttcgctcgctccaccctcaacatggag
acgtatgaccagcaggccatttacgactgtcctgctcccagctacgaggagggcagcagc
tcggacctttccgttatcgccatctctgaggatgatgatgatgatgataatgatagtgag
gacaatgtgacagagaatccctccgctgtccaggaacaccttgcctccgttgccaatgca
agtggagtggaaagtttgctgagtcagtcagcgtgggatgacgagacgcctggtccctcc
tattcaacccttttcccctcttctagccaatcacaggatgaagaggcggagccaagctca
agcacagcaccgccttacagtggccctgactgccctgcagcaagtagcagcgtgtcagct
ggacggggtgaagataacgaagaggaagagtgcctgattgtgggatacgtgaagccgatg
gccgaaaggaccccagagcttgttcagctctcgtcggattcgtctgaagaggagcaggag
gcagccgatacgaagacaccaaccacagtaacgaaatctgagacatcccaaatggagctc
ccttcgcagtcccatatgaacctgcgtgttcctagtttatccccaggcctcgctccctct
tgcagtccccagcggacacactcggaatcactcagcagagaaagaaagaccgattacttg
tcctgccgtgctcacccgtccaacgatggttcagatttacggcagaatcgagatgacact
gagctcatagcgcacgagaggcgcaaagactcacatcagcgctcaatcaacaaagaaaaa
gccaagaggtcagaaaaatcatggcacgacaagaccccagattgctcgccaatccaaaca
cgttcgcctccaagttggtccggtcagagtccaacggtgtctgtttggagcggcagccct
gtctctgggtcaaacggtagcgactgctctacctctctaaacaacacgagcctagaacat
tcgtgccacgtgcgagagaaactctcacagtctccttcttactccaggaagaggaaaatc
aaggaaaataagagcaggtctcccgacttgaactcattccttaattcccaccatcccaga
gagtcacaccgctgtcgtaaacggcgcaagcgagcgatcagtagcagcagcgctgattct
caatccgaaaggtcttgcctggacaaaccaagtgggaaacgcaagtacaaaacccggcac
ttggagcgagcggcccagcggctgcacgaggatggaactgcaaccaaggaaaagcgtcgt
cggcggagtagggaacgatctcccagtgtggagatcatctatgaaagaagggcgcccgaa
ccacattggcaccagcggaagaagaagaagaagaagcaccgaaagcggaagagggaactc
cgttcacccactgtaatcacgattgacagcgacagtgaccgtaccatcgactgtctggac
cgtgtcatggatattatagaccaaaccgctgcagatgttgagccgagggacgggactcct
gggcaagatatgatccagaacttgagttgtaccttagcctcctcaaatcctcaatccgag
tcctcgagtcccgtagccgacccaaccactgaacgcacacttaacctggacgactatgta
gtggacgtagtcgaccgcagtagttctgactgctcccgaaatctggatgagagtagccat
gaagagtttgtgcccaaccccttcccaatggcttcgatgtcaccagccccaccttcggac
acaagactgcttgaaactatactgcaagatcttgaggaattcctaccagaggcgaggacg
agtccttacgcaagttctcacgtccaacaggagcgagcttctatccctcgaaaagaccaa
tcagacacaagaggagttacagaaaacctggagaaaaagaacacggacggagacgggccg
caagaggcggtgaccgacattgctagctag
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integrated database retrieval system
