Pimephales promelas (fathead minnow): 120484218
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Entry
120484218 CDS
T08155
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120484218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120484218
03016 Transfer RNA biogenesis [BR:
pprm03016
]
120484218
Enzymes [BR:
pprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
120484218
Messenger RNA biogenesis [BR:
pprm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
120484218
Transfer RNA biogenesis [BR:
pprm03016
]
Prokaryotic type
tRNA degradation factors
120484218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
Motif
Other DBs
NCBI-GeneID:
120484218
NCBI-ProteinID:
XP_039535198
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MRVMMMSVMKARLGWVRLAAVRGFHERTVAVGLGDRRLEISTGKLARFADGCAVVKLGET
SVMVTAVSKSKPASASFMPLVVDYRQKAAAAGRIPTNHLRRELGSTDSEILTSRLIDRSI
RPLFPAGYFYDTQVLCNILAADGVNDPDVLAINGASAALALSDIPWSGPIGAVRVGLVDG
EFLVNPSRSEMNRSSLNLVIAGAPASQVVMIEAAAENVLQQDFSHAVKLGVKHTQLIVQA
IQQMSRELKVSKRSPARLFTASAEMVDYTRLLTSAKIYAVFTDFTHDKISRDEAINKIRL
EAEEQIREKFPQAETFEVVEAFNSVSREIFRNLVLQEYRRCDGRDLTSLRNISCEVDVFK
PLHGSALFQRGQTQVLCSVTFDSLESSLKTDVITTALRSVTHANI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgatgatgatgagtgtgatgaaggctcggctcggctgggtccggctcgctgct
gtcagaggctttcatgagcggactgtggctgtgggtttaggggacaggaggctggagatc
tcaactgggaaactcgctcgcttcgctgacggctgtgcagtggtcaaattgggcgagacg
tcagtgatggtgaccgcagtcagcaagagcaaaccggccagcgcttccttcatgcctctc
gtggtggattacaggcagaaagcagcggctgcaggacgaatacccacaaaccacctgagg
agagaactgggcagcaccgactccgagatcctgaccagccggctcatcgatcgctccatc
aggccgctgtttcccgccggatacttctacgacacacaggtgctgtgtaacatactcgcc
gctgatggagtcaacgacccggatgttctggccattaacggagcgtctgcagctctggct
ctgtctgatatcccctggagcggccccatcggtgcggtgcgcgtggggctggtggacgga
gagttcctggtgaacccctcgcgctcggagatgaacaggagctcgctgaacctcgtgatc
gcgggagcgccggccagccaagtggtgatgatcgaggccgcggcggagaacgtcctccag
caggacttcagtcacgcggtgaagctgggggtcaaacacacacagctgatcgtccaggcc
atccagcagatgagccgtgagctgaaggtgtccaagcgctctcccgccagactcttcacc
gcctccgccgagatggtggactacacacgcctgttgacgtccgctaagatctacgctgtg
tttacagacttcacacatgacaagatatccagagatgaagcgattaataagatccgtctg
gaggccgaggagcagatcagagagaagtttccgcaggcggagacgttcgaggtggtggag
gcctttaacagcgtctctcgagagatcttcaggaatctggttcttcaggaatacagacgg
tgtgacggaagagatctcacgtctctacgcaacatctcctgtgaggtggacgtgtttaag
ccactccacggctcggctctcttccagaggggtcagacacaggtgctgtgctccgtgacc
tttgactctctggagtccagtctgaagacagacgtgatcaccacagcgctcaggtcagtg
acacatgcaaacatatga
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