Pimephales promelas (fathead minnow): 120484230 Help Entry 120484230         CDS       T08155                                  Symbol ccdc88ab Name (RefSeq) girdin isoform X1   KO K25392   girdin Organism pprm  Pimephales promelas (fathead minnow) Brite KEGG Orthology (KO) [BR:pprm00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:pprm03037]     120484230 (ccdc88ab) Cilium and associated proteins [BR:pprm03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    120484230 (ccdc88ab) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HOOK_N KASH_CCD GAS DUF4472 Glyoxalase_4 Motif Other DBs NCBI-GeneID:  120484230 NCBI-ProteinID:  XP_039535216 LinkDB All DBs Position Unknown AA seq 1855 aa AA seqDB search MEEVFTALLEDFLQSPLVCWVKTVSRLQSDGSHLSEFMTLVDGVYLNDIMLQINPQTSVQ RAHRKVNNDPSLRIQNLCVLVQHIKSYYQEALQQLVVMSLPDVLVLGRTPLSEQGLEEMR KLLLLLLGCAVQCNRKEEYIDRIQTLDLETQAAIAAHIQEVTHNQENVFDLQCAEESEPV PHDKDELVRHLTFNLKRLVDERDQHAEMIVSLTVERDCGHMTLAPSPSESPSMSRTESVQ HLSVELADAKAKIRRLRQELEEKTEQLLDCRQEVDHMEQEVKRLQQENVQLVCDARSLRA YRDELDAFREKAVRVDKLESEVIRYKEKLHDIEFYRTRVEELKEDNQVLLETKSMLEDQL ESFRARSDKHHELEKENLQLKNKIHDMEMERDLDRKRMEELMEENLTLEMAQKQSMDESL HLGWELEQLSKTTPELTEVPQKSLGHEVNDLTSSQLLKLEKENQMLQKSVEELKAASESS ARLRLEKDKHTLIQQLEQLQTELAADRESLRSAESLSSDLLKEKAQLEKTLETLQENSDR QVKGLEQENAHLTQTVSSLRQRSQVGAEARVKDIEKENRVLHESIKETSSKLNKMEFERK QLRKDLEQLKDAGERAEELEQEVRRLEREKEGLQKRLSAQAITCEKVEVLEKENAELEAE SRRLKKAADALRNLSYQLEGLEKENRELDQENLELRRTVESLRSSGAKAAQLELENRELE DERTHLRKSLELMKASSKKNERLEASNQSLDAENQRLQKGLESGGRKIQQLEGEVRELEQ ENHSLQESLEQMKISSKSLEQLAQENASLEADNTQLEKDRKQLEKENKRLRQQAEIKDSK LDEDNLRIAHLEKENRALGKEVHALKDTCSRARDLEKDNKELVKQATIDKKTLVTLREDL VNEKLKTQQMNNDLEKLTHELEKIGLDKEGLLGDEESSDDRFKLLECKLESTLRSSLEIK VEKISALEARLQESSNLNQQLRQELRTVKKNYEALRQRQEEECVSQSSPARGREEHSVRK WEKESQEATRELLKLKDRLIEVERNNATLQAEKQALRTQVKQLESQSTNLQAQILALQRQ TASLQENNTTLQTQNAKLQVENSTLNSQSAALMSQNAQLQTQQSSTESERDVAIREKEDL RSVYDLLLHDHEKLSALHERQASDYEDLIGRHGELKSGYKSLEGQHRGLENRYNQLLKQK TELEQLEKELKADREKMISDNKSHQDTVAQFHRLSAEHQTLTSTHQQLLKDSELLQADHK SLKTQLNTARLEQTRLEAEFSKLKEQYQQLDITSAKLTNQCELLSQLKGNLEEENRHLLD QIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQYKFYDPSPP RRRGNWIALKMRKLIKPKSRERMRSLTQTPSRSESSEGFLTLPHPDSQDSSSVGSGSNSL EDSLAHRSGRKRAEKSQSQASSNALKKLPFMRNRSKEKDRVKAVYRRSMSMNDLLQTMAV SEGQWSSSTDHLEAPDGKEFGSMVYSSAGADYASLSLIRAAPHRTHTGNAMSSDDITQVS SEESSVLRAQGVMNGSASAAHSESSGDVSVCLDSPVRMTSSQLSTQDGSHSVQPERVSLQ QFLTESTDPAEESLSAPPGRVSGARERVKGRGILRSASGRAAAPDSGPPGRPSLRKAEST RAKGSAPPRAGLASQSRAVSVSERLDSSSSGLPRASSVISTAEGTVRRTSIHDLLSKDSR QPVLVDPCPARTQSSSEYGPRALPTSASMPCSVAESELSLQAFLGPSFTVDSMFLDSVFG EPAVTGGARNQAILSLNTALVSNISGPPPKAPPADGEPDVCVPAEESLWYEYGCV NT seq 5568 nt NT seq  +upstreamnt  +downstreamnt atggaggaggttttcacggctttgttggaggattttctgcagtctcctctggtgtgctgg gtgaagactgtctctcggctccagtcggatggctctcatctgtcggagttcatgacttta gtggacggggtttatctgaacgacatcatgcttcagataaacccccagacgagtgtccag agagcccacaggaaggtgaacaacgacccgtcgctgcgcatccagaacctgtgtgtcctc gtgcagcacatcaagagctactatcaggaggcgctgcagcagctggtggtgatgtcactt cctgatgtgctggtgttgggcaggactcctctcagtgagcaaggactggaggagatgagg aaactactgttgctgctgctgggctgtgctgtacagtgtaacaggaaggaggagtatatc gacaggatccagacgctggacctcgaaacacaggcagccatcgccgctcacattcaagag gtgacccataaccaggagaacgtgtttgaccttcagtgtgcggaggagagcgagcctgtc ccgcacgataaagacgagctcgtcagacacctgacctttaacctcaagcgcctcgtcgac gagagagaccagcacgctgagatgatcgtctctctgactgtggagcgggactgtggtcac atgactctcgccccgtcgcccagcgagtctcccagcatgagccgcacagagagcgttcag catctgtctgtggagctagccgacgctaaagctaagatcagacgcctgcgccaggagcta gaggagaagaccgagcagctgctggactgcagacaggaagtggaccacatggagcaggaa gtgaagagactgcagcaggaaaacgtgcagctggtgtgtgacgcgcgctcgctgcgggcg tatcgggatgagctcgacgcgttcagagagaaggccgtcagagtcgacaagctggagagt gaagtgatccgctacaaggagaagctccacgacatcgagttctacaggaccagagtcgag gaattgaaggaggacaatcaggttctgctggagaccaaaagcatgctggaggatcagctg gagtcattcagagctcgatctgataaacatcatgagctggagaaggaaaatctgcagctt aaaaacaagatccacgacatggagatggagcgggacttggaccggaagcggatggaggag ctgatggaggagaacctgacgctagagatggctcagaaacagagcatggacgagtctctg cacctgggctgggaactggagcagctctccaagaccacacctgagctgactgaagtgccg cagaagtctctgggtcacgaggtgaacgacctgacgtccagtcagctgctgaagctggag aaggagaatcagatgctgcagaagagcgtggaggagctgaaggcggcgagcgagagcagc gcacgcctacgcctggagaaagacaagcacacactcatccaacagctggagcagctgcag acggagctggccgcagacagagagagtttgcgcagtgctgagagtctgagctcagatctg ctgaaggagaaagctcaactggagaaaacactggagacgctccaggagaactccgacaga caggtcaagggcctggagcaggagaacgcacacctgacccagaccgtctcctctctccgg cagcgctctcaggtcggcgccgaggcccgcgtcaaagacatcgagaaggagaaccgcgtg ctgcacgagtccatcaaagagaccagcagcaaactcaacaagatggagttcgagcgcaag cagctccgcaaggacctggagcagctcaaagacgccggcgagcgagccgaagagctggag caggaggtgcggcggctggagcgcgagaaggagggtctgcagaagcgtctctcggcccag gccatcacctgcgagaaggtggaggtgctggagaaggagaacgcggagctggaggccgag agccggagactgaagaaggcggccgacgccctgaggaacctgtcctaccagctggagggg ctggagaaggagaaccgagagctggaccaggagaacctggagctgcggcgcacggtggag tccctgcggtccagcggagccaaagccgcacagctggagctggagaaccgggagctggag gacgagcggacgcacctcaggaagagcctggagctgatgaaggcctcgtccaagaagaac gagcgtctggaggccagcaatcagagcctggacgcggagaaccagcggctgcagaagggc ctggagagcggcggccgcaagatccagcagctggagggagaggtgcgggagctggagcag gagaaccacagtctgcaggagagcctggagcagatgaagatctccagcaagagcctggag cagctggcgcaggagaacgcctcgctggaggccgacaacacgcagctggagaaggaccgg aagcagctggagaaggagaacaagcggctccgacaacaggccgagatcaaggactccaag ctggacgaggacaacctgcgcatcgctcacctggagaaggagaaccgcgcgctcggcaag gaggtccacgccctcaaagacacgtgcagccgcgcccgagacctggagaaggacaacaag gagctggtcaagcaagccaccatcgataagaagactctggtgaccctgagagaggacctg gtcaatgaaaagctgaagactcagcagatgaacaatgacctggagaagctgacccatgag ctggagaagatcggcctggataaagagggtcttctgggtgacgaggagagctctgatgac aggtttaagcttctggagtgtaagctggagtccaccctgaggtcatctctggagattaag gtggagaagatctcggctctggaagcgcgactgcaggagtcctccaacctcaaccagcag ctgcgccaggagctccgaacggtgaagaagaactacgaggcgctgcgtcagcgtcaggag gaggagtgtgtgtcccagagctcgccggctcgcgggcgagaggagcacagcgtcaggaag tgggagaaggagagtcaggaggccacgcgagagctgctgaagctcaaggaccggctcatc gaggtggagagaaacaacgccactcttcaggcggagaagcaggctctgcgcacgcaggtg aagcagctggagtctcagagcaccaacctgcaggctcagatcctggcgctacagaggcag accgcgtctctgcaggagaacaacaccacgctgcagacgcagaacgccaaactacaggtg gagaactcaacactcaactctcagagcgccgctctcatgtcccagaatgcccagctgcag acgcagcagtccagcaccgagagcgagagagatgtggccatacgagagaaagaagacctg cgctcggtgtacgatctgctgctgcacgaccacgagaagctgtccgccctgcacgagaga caggcgtccgactacgaggatctgatcggcagacacggagagctgaagagcggctataag agtctggaggggcagcatcgcggcctggagaacaggtataatcagctgttgaagcagaag actgagctggagcagctggagaaggaactcaaagcagaccgagagaagatgatctccgac aacaagagccatcaggacaccgttgcacagttccacagactcagcgccgagcaccagacg ctgacctctacacaccaacagctcctgaaggacagtgagctcctgcaggcggatcataag agtctgaagactcagctgaacacggcccgtctggagcagacccgcctggaggccgagttc tccaaactcaaggagcagtaccagcagctggacataacctcggccaaactcaccaatcag tgcgagctgttgagccagttaaaggggaatctagaagaagagaaccggcatttactggat cagatccagaccctgatgctgcagaaccggaccctgctggagcagaccatggagagcaaa gacctgttccacgtcgagcagagacaatacattgataaactcaatgagctgaggagacag aaggagaaactagaggagaagatcatggatcaatataagttttatgacccatcaccacct cgaaggagagggaactggatcgcactgaagatgaggaagctcatcaagccgaagagtcgt gagcgcatgcgttctctcacacagaccccgtcccgctcggagtccagcgaagggttcctg accctgccccacccggacagccaggacagctcatccgtgggctccgggtccaactcgctg gaggattcgctcgcacaccgcagcggcaggaagagagctgagaaaagccaatcgcaggct tcctctaacgcgctgaaaaagctcccgttcatgaggaaccgatccaaggagaaagaccga gtgaaggctgtctaccgccgctctatgtccatgaacgacctgctgcagacgatggctgtg tccgagggtcagtggtccagcagcacggatcatctggaagctcctgatgggaaggagttc gggtccatggtctattccagcgctggtgctgattacgccagcctaagcctgatccgcgcc gctccacaccgcacccatacaggtaacgccatgtccagtgatgacatcactcaggtgtcc tcggaggagtcgagtgtgctgcgagctcagggcgtgatgaacggcagtgcgagcgcagct cacagcgagagcagtggagacgtcagtgtgtgtttggacagtcctgtgaggatgacatca tcgcagctcagcacacaggacggctcacacagtgttcagcccgagagggtttccctgcag cagttcctgaccgagagcacagacccggcagaggagtctctgtcggctccgccgggccgt gtgtcgggagccagagagcgcgtgaagggccgggggatcctgcgttcagccagcggcagg gcggcggcaccagactccggtcccccgggccggcccagcctgcgtaaggcggagagcaca cgggccaagggttcggcgccgccccgagccggcctggcgtcccagagcagagcggtgtcg gtgtcggagcgcctggactcgagctcctcgggtctgccccgcgccagcagcgtcatctcc accgccgagggaaccgtgcgcaggaccagcatccacgacctgctctccaaggacagccgg cagcccgttctggtggacccgtgtcccgcccggacccagagctccagtgagtacggcccc cgcgccctgcccacgtcagctagcatgccctgcagcgtagcggagtccgagctgagcctg caggcctttctaggtccctccttcaccgtagactccatgtttctggactcagtgtttggg gagccggcggtgacgggcggcgctagaaaccaggccatcctgtcgctcaacacggccctc gttagcaacattagcggccctccccctaaagccccccccgctgacggcgagcccgatgtg tgtgtgccggcggaggagtcgctgtggtacgagtacggctgtgtgtga

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