Pimephales promelas (fathead minnow): 120484264
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Entry
120484264 CDS
T08155
Name
(RefSeq) LOW QUALITY PROTEIN: polycomb protein SCMH1-like
KO
K11461
polycomb protein SCMH1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120484264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120484264
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
120484264
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
120484264
NCBI-ProteinID:
XP_039535274
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All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MNQIPATTARCHLWRGRDCCLALKGALHLNRELENWETRSHLLREVGKSWIMKKPGPQKA
IEWKDSRRIKHARSGRPSRVPSQYQGHFSWEKYLKETGAVAAPPHCFRQSTTPPVNEFKA
GMKLEAQDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNG
GMLQPPLGFRLNASSWPMFLLKTLNGAEMAPARIFHKQEPPAPEQNCFEVGMKLEAVDRK
NPHFICPATVGALRGVEVLVTFDGWRGAFDYYCRYDSRDIFPVNWCTLTGDNLQPPGTKV
GLPKTLGALGALPDGGIEGTGMAPTPGRPPPQKKRKPGRKKTNLSGPWGQKGTLGSQTSQ
PIKELESIKIPKKRGPKPGSKLSWAKRTAWLEGAIGGPGRPISKPRGKLPASWGQKVQQN
PTEPIKIPKKRGPKPGSKRKPRLVPNPMPTSPSSSTPEPDTSSVPLDHATIPSAALQAPT
VCVYLNKYGKVGPHLDARRIQSLPDHFGPGRASSVLQQCVQACVDCAHNQSIVFSCLKPG
HGGELISAYFEQQHHTLTLPAVNSVTYLLRFLEKLCHNLHCDPLFGNQPVPXGGVHYDSR
TYTERRNFAESLSSGPGRGTKRFLQHDAYHNNPVPHKIPKNHRISSEEPFLIENGVGGSE
VSEKTHLSPGHGLSVRPLSQNSSSPGKLRRLGSTGSERFVSSRESPRPSGQDPNLWTVED
VMQFIRDIDPQLGPHADLFRKHEIDGKALLLLRSDVMMKYMGLKLGPALKLTFHIDRLKQ
GR
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaatccctgccactactgcgcgctgtcatttatggagagggagggactgttgt
ttggcgctcaaaggcgctctgcatttgaacagagaactggaaaactgggagacaaggagc
catcttttgagagaggttgggaaaagctggatcatgaagaaacctggaccacagaaagct
attgagtggaaagatagcagacggatcaagcatgctcgcagtggtcgtccctctcgtgtg
ccatcacagtaccaagggcatttcagttgggagaagtacctgaaagagacaggagcagtc
gctgctcctcctcactgcttcagacaaagcacgacccctccagtgaatgagtttaaggct
ggcatgaagctggaagctcaggatcctagaaacactacatcgacctgcattgctacagtg
gtgggtctgacgggttctcgcctccgcctgcgactggacggtagcgacaacaagaatgat
ttctggcgcttggtggactctgcagaaatccagcccattggcaattgcgagaaaaacgga
ggcatgctgcagccgccactagggtttcgtctaaacgcatcatcatggcccatgttctta
ttaaaaacactcaatggagcagaaatggccccagcccgaatctttcacaagcaagagcca
cctgccccagagcagaactgttttgaggtggggatgaagctggaggcagtggacaggaag
aatcctcacttcatctgtcctgccacagtgggcgcgctgcggggtgtggaggtgctggtc
acctttgacggctggcggggcgcttttgattactactgccgctacgattccagagacatc
ttccccgtcaactggtgcacgctcactggagacaacctgcagccaccaggcactaaagtt
gggttaccaaagacgctaggtgcacttggtgccctaccagatggtggcatagaggggaca
ggcatggctcctacgccaggccgacccccaccccaaaagaaacgtaagcctggccgcaag
aaaaccaatctatccgggccctggggtcagaaaggaacacttggttcccagacaagtcag
cctataaaggaactggaatctattaaaatccccaaaaaacgaggccccaaaccaggaagc
aagctaagctgggccaagaggacagcatggcttgaaggagcgattggaggtcctggtaga
cctatcagcaaacccagaggcaaactgccagccagctggggccagaaagtgcagcagaac
ccaacagaacccatcaagattccaaaaaagagaggccccaaacctggcagcaagagaaag
ccccgattggtacccaatcctatgcccacctccccaagcagtagcactccagaaccagac
accagctcagttccgctagaccacgccaccattcccagcgccgccctacaggcccctaca
gtatgtgtgtacttgaataagtatggaaaagtaggtccccatctggatgcacggcgtatc
cagtccctgccagatcactttgggcctggtcgagcttcatctgtgctgcagcagtgtgtt
caggcctgtgttgactgtgcacataaccagagcatagtcttctcctgcctcaaaccaggt
catggaggagagctcatatcagcctactttgagcagcagcaccacactctaacactgccg
gcagtgaacagtgtgacgtatctgctgcgcttcctggagaaactctgtcacaacctgcac
tgcgacccattgtttggcaatcagcccgtccctntgggaggagttcactatgacagccgg
acatacacagagaggagaaactttgccgaaagtctgagttctggacctggtcgaggcact
aagagattccttcagcatgacgcctaccataacaatcccgttccacacaaaatacctaaa
aaccaccgtatctcctcagaagaacccttcctgatagagaatggggttggcggctcggag
gtctcggagaaaacacatttgtctcccggacatggcttgtcagtgcgtccactctctcag
aatagcagctcaccggggaaactacgtcgtctgggctcaacaggttctgaacgctttgtg
agctcaagagaaagcccgcgacccagtggacaggaccccaacctgtggacggtggaggac
gtcatgcagttcatccgagacatcgaccctcagctcggaccacacgcagacctcttccgc
aaacatgaaattgatggcaaagctctcctccttctccgcagtgatgtcatgatgaaatac
atggggctgaagttgggtcccgctcttaaactcaccttccacattgacagactgaaacag
ggtcgttga
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