Pimephales promelas (fathead minnow): 120484287
Help
Entry
120484287 CDS
T08155
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120484287 (lingo4b)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120484287 (lingo4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
Ig_3
ig
LRR_EndoS
Ig_2
LRR_Zer-1
V-set
LRR_9
LRRNT
LRR_6
LRR_RPS2
C2-set_3
C2-set_2
Motif
Other DBs
NCBI-GeneID:
120484287
NCBI-ProteinID:
XP_039535303
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MFMDLCGQRGAWSVLLLWCLNLSAADLTCPQKCACYRDTLEVNCSSRHLTGVPEVLLSNA
KRLDLSRNQLKTLARRQFSGLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKI
LPVGVFSGLANLQRLDVSENEILVFLDYTFQDMTNLQQLDAGENDLVFISQRAFVGLQAL
KELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISALPNNAFRRLHQLRTLQILHWPSLE
TLNSNSLVGLNLTTLVLSNCNLSSVPYAPLRHLAYLRYLDLSYNPITSIQGHLLGELLRL
QELHLVGGSLLRIEPAAFRGLVHFRLLNVSSNRLTTLEESVFHSVGNLQTLRLDRNPLAC
DCRLLWVVRRRRRLDFDGRQPSCSAQNQHKKAFRDFSEADLPVIFTCRQAQIVTRQLQDA
SVVEGMSIRFDCRAEGYPSPSISWMSAQQTALSSVGRIRVLANGSLEVRYAQVQDSGTYL
CTAANAAGNDSISMSLQVEGLPQNRTASYFSDEGWMETSLPPSTNSSTRVSNPYPFDAKT
LIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDGGDTGRFT
MKLI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgttcatggatctgtgtggccagcggggcgcatggtcagtcctgctgttgtggtgccta
aacctatcagctgctgacctcacctgcccgcagaaatgcgcttgttaccgtgacacgttg
gaggtcaactgctcctcaagacacctgacgggtgtgcctgaggtgttactcagcaatgcc
aaacgtttagacctttcaagaaaccaactgaaaacgctggctaggcgtcagttctctggc
ctgtcaaagcttgaggacctggacctgagtgagaacatcatctccatgattgaggtggaa
acatttcaggggctgaagaacctgcgatacttgaggataaagaacaaccgcctgaagatc
ctcccggtcggggtcttctccggcctcgccaaccttcaacgtctggacgtcagtgagaat
gagatcctggttttcctggattacacattccaggacatgactaacttacagcagctcgat
gcaggagaaaacgacctggtgtttatctcgcaacgggcttttgttgggctgcaggcgctg
aaggagctgaacgtggaccgcagcaatctgacctccatccccactgaggctctgtcgcaa
cttcagagcttgaccaagctgcgcctgcgcaagctgaccataagcgcgttgcccaacaat
gcctttcgccgactgcaccagctgcgcacattgcagatcctccactggccttctctagag
acgttaaatagcaacagcttggttggtctcaaccttaccactttagttttaagcaactgt
aaccttagctctgtaccttacgctccactccgccatctcgcttacctgcggtacctcgac
ctgtcctacaaccccatcacctccatccaaggccacttgctgggggagcttctgcggctg
caagagttgcacctggtaggtgggagcctgttacgtattgagccagctgccttcaggggt
ctggtccactttcgtctgctcaacgtgtcctcgaatcgtctgacgacattggaagaaagt
gtcttccactcggtagggaacttgcagacactgcggctggacaggaaccctttggcttgt
gactgcaggctactctgggttgtgcgacgacgtcgaagactggatttcgatggccgccaa
cccagctgttcggctcagaatcagcacaagaaggcatttcgtgacttttcggaggctgat
cttccggttatatttacgtgcagacaagcacagattgtgacccgccagctgcaggatgcg
agtgtggtggaaggcatgagcatacggtttgactgcagagccgagggctatccgtcgcct
tctatttcctggatgtcagcccagcagactgcacttagctctgtcgggagaatacgagtg
cttgctaatgggagtttagaagtgcgttatgcccaagtacaagacagtggaacgtatctg
tgcactgcagctaatgcagcggggaacgacagcatctccatgagtctgcaagttgagggg
ctcccacaaaaccgcaccgcatcgtatttctcagacgagggatggatggaaacttcattg
cctccttctaccaactcctccacacgggtgtcaaatccttacccgtttgatgctaaaacc
ctcatcattgctacgaccatgggatttctttctttcctcagctctgtggcgatctgtttc
gtgtttatgttcttctggagtcagagcaaaggacagataaaacacactgccactatagac
ttcgtgccacgatcatccatgggtggaggtggagatggtggggacactgggagattcaca
atgaagcttatttga
DBGET
integrated database retrieval system
