Pimephales promelas (fathead minnow): 120484338
Help
Entry
120484338 CDS
T08155
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120484338 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120484338 (rad54b)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
120484338 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
HDA2-3
Motif
Other DBs
NCBI-GeneID:
120484338
NCBI-ProteinID:
XP_039535378
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MRRSGAPSQICGNATKKPRFMAPGPARNDGSSLSGPRPEPSLPSPSPTPALGNVLLNKVQ
RCLSSKDSPAVSNAPLGSKALARVLSAIPQEEYKENSLGSSSECLEPEQSADKNSSSIQP
NTLANCTSDARYYSVMWCKASSRKHKRWEGDAVLVARGRTVILKDMEGRDIGRGSGYKAS
ELESLCEGQSLMVGGKQIEVMGIISNEDYAKGRCFQDAVVETSAEKVLKAPVYHPVSKSF
TKPALKGGALTDSEPDKPICKPRHNPNTPGALVMPRPTTDHQWVYNKSGSPLVDVVIDPH
LTNHLRPHQREGVVFLYECLMGMRLAGRFGAILADEMGLGKTLQCVCVLWTLLRQGPYGG
RPVLKRAVVVCPGSLVKNWAAEFNKWLGRERISVYTVDQDHRVEDFTSSPLCSVMVISYE
MFLRSVDRLKELDFGVLICDEGHRLKNSNIKTTNALTALSCDRRLILTGTPVQNDLQEFY
SIVEFVNPGILGTSAAYRKIYEEPILRSRQPTCTEEERCIGEERAAELFRLTGVFTLRRT
QEIINQYLSERIEWTVFCKPTELQLRLYGVLLASRPIRACLSGASTHTYTHSPHLACINA
LKKLCNHPGLLYNTLQAKSDDMMEDGIMELFPEGYSTGAFSTADSGKLLVLTDLLAAIQH
VNRTDRAVLVSNYTQTLDLLQDVCDQIGYKWCRLDGQTPVAQRQRIVDSFNSPHSPNFLM
LLSSKAGGVGLNLIGASHLVLYDMDWNPANDIQAMARVWRDGQKKTVHIYRFLTTGSIEE
KIYQRQVSKQGLSGTVVDLTKKADHISFSSEELRDLFSFDPNTTCLTHDLLGCQCTGDGK
TAGFVKEINEETGRACQLGRHADSTVPLPQRVSMSELMQWSHFSGAVQSFHDIYLNHARN
HITYAFQSTTSKSQTV
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagatctggagctccgagtcagatctgtggcaatgctactaagaaacccaggttt
atggcaccggggccagcgaggaatgatggatcatctttatcgggtccccgaccagaacca
tcactaccgtcaccatcacccacgcctgctttgggaaatgtgctgctaaataaggtccag
aggtgtttgagtagtaaagattctccagctgtctctaatgctccattgggcagtaaggct
ttggccagggtcctgagtgctattcctcaggaggaatataaggaaaacagcctcgggtct
tcatctgagtgtcttgaacctgaacaatcagcagataaaaacagctcctcaatacagccg
aacactcttgcaaactgcacaagtgatgcacgctactatagtgtaatgtggtgtaaggcg
tcatcaaggaagcataagcgctgggaaggcgatgctgtgctagttgccagagggcggact
gttatcctcaaagacatggaggggcgggacattggacgaggttcaggctacaaggcatca
gagctggagagcttgtgtgagggtcagtctcttatggtgggagggaaacagatcgaggtc
atggggatcatatccaatgaggactacgccaaaggccgttgtttccaagatgctgttgtt
gagacttctgcagaaaaggtcttgaaggctcctgtatatcacccagtgtccaaatccttt
accaaaccagcgctcaagggaggtgcacttacagattctgaacctgacaagccgatctgt
aaacccagacataaccctaacacaccaggcgccctcgtaatgccacgaccgacaactgat
caccagtgggtgtataataaatccggttctccactggtggatgtggtcatcgacccccac
ttgaccaatcatcttcggccacatcagagagagggcgtggtcttcctttatgaatgctta
atgggaatgagacttgctggccgctttggggctattttggcagatgagatgggactgggg
aagacactgcagtgtgtttgtgttctgtggacactactgagacaaggcccctatggtggg
cggcctgtactgaagagggcagttgtggtttgtccaggaagtttggttaagaactgggct
gctgagttcaataagtggctgggcagggagaggattagtgtttacactgtggaccaggat
caccgcgtggaggacttcacctcctctcctctttgctccgtcatggtgatcagttatgag
atgtttctgcgctctgtggaccgattgaaagagctggattttggagtgctcatctgtgac
gagggtcatcgccttaaaaacagcaacatcaaaacgaccaacgcactcacagcgctctca
tgtgaccgccgtcttatattaacaggaactccagtgcagaatgatctgcaggagttttat
tccatcgtagagtttgtaaatccaggaattctgggaacatctgctgcctacaggaagatt
tatgaagagcccattctcagatctcgccagcccacctgcaccgaggaagagcgatgtatt
ggagaggagcgtgccgctgagctctttcgtctaacaggtgtgtttacgttacggcgcact
caggagatcattaatcagtatttatccgaacggattgagtggaccgtattctgcaaaccc
actgagctccagctgcgtctgtatggagtccttctggcctcacggcccatcagagcctgc
ctctctggtgccagcacacacacttacacacacagcccacacctcgcatgcattaacgcc
ctcaagaaactctgcaaccaccctgggctgctctacaacactctacaggcaaaatcagat
gatatgatggaggatggaattatggaactctttcctgagggatattccactggtgccttc
agcactgcagactctgggaaacttctggtgttaacagacctgctggcagcgatacagcat
gtcaatcgaacagacagggctgttttggtgtccaactacacacagactcttgacttgctg
caggatgtctgtgatcaaataggctataaatggtgtcggcttgatggccagacacctgtt
gcccagagacaacgaattgttgattccttcaacagcccgcactcacccaacttcctgatg
ctactcagctccaaggctggaggagtggggctaaacctcataggtgcctctcatcttgtt
ttatacgatatggactggaaccctgccaatgatatacaggccatggcacgtgtgtggcgt
gatggacagaagaaaacagttcacatctacagatttctgacaacaggttcaatagaagag
aagatctatcagaggcaggtgagtaaacaggggctttctgggacagtggtggacctgacc
aaaaaagcggatcatattagcttttcttctgaggagctacgagaccttttcagttttgac
cctaatacaacctgcctcacacatgacctactgggctgccagtgcaccggagatggaaaa
acagcaggttttgtgaaggagataaacgaggagaccggaagggcatgtcagctgggtcgc
catgctgacagcacagtgccattaccgcaacgagttagcatgtctgagctcatgcaatgg
agccatttttcgggagctgttcaatcatttcatgatatttacctaaaccatgcccgtaac
cacatcacatatgcctttcaaagcacaacttctaaatcccaaacagtctaa
DBGET
integrated database retrieval system
