Pimephales promelas (fathead minnow): 120484381
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Entry
120484381 CDS
T08155
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120484381 (cdh17)
Cell adhesion molecules [BR:
pprm04515
]
Cadherins
Major cadherins
120484381 (cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Big_9
Cadherin_CELSR2_9th
Syndecan
ECD
Motif
Other DBs
NCBI-GeneID:
120484381
NCBI-ProteinID:
XP_039535442
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MRGARLLYLTLLVSIAHGIGLEDKTGILDHKVLDVPENTPVPYPIYQFTSASEGVSSYHV
SGETEGKISISSDGWLFLEHPLEWSPEKNHHLHIEARSADGETVDGPYSVVLQVVDVNNN
NPVFSESQFSGRVREHSPAGFVFMQVFASDADDPNTVNAQLKFSIVNQIPNPENMFYFGI
NPDNGEIFITEQGAASLKARPAVTYSRGEVRGSPDVLRKKFEDYCIPKNNIPLENNPFYT
CVERVERRQVDLLVDPDYALIVRAEDLGDPNALSSTTRVNIVIIQNLWVSPAPIAIRENL
DEEYPMYLTTVRSNDPTALYRLVQKERLNFPFTINQDGEIYATGPLDREVKDMYILVAMA
EDEHGVELEKPLEIVVRVEDVNDNPPVCDEGAVFEVQENEPIGNTIGVLLAHDSDEENTL
NSLLTYSLLSQTPTHPNENMFTIDQVNGEIKVANQNFQRKAVSQYELTFTVSDQVYTAEC
KVIIKVIDINNEIPVFEKKDYGTYSVPELAEAGTTLLIIKATDADDPGTGSSRVEYHISA
GDPHNLLAIEVDEATGAGRVYIARQLDYELQSVFNLQIDARNPEPLVEGLEYDEDATTVV
VIQLVDVDEPPEFKEDTLDVNVPENITIGTVIMKAEAKDPEGKTIKLRMEGDEHNWLELD
ADSGELKTKAALDRETVEQITLTVIAYETEGDKQEGEMEVNIHLLDVNDNYPKLQWKQNF
ICIQDMTPLTLTAVDKDSDPYGEPFTFSINRKSPNFEIKPVDGTSAKLILKKKPSSDQNV
SVPINIKDNAGMGITQKFDVRICNCTKLGYCYMEPEAHSWKLGMGSTIGILAGIFGFIVL
SMVIVMYRIKKKDQTRAADGGETKAML
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtgcacgtttgctatacttgacccttctcgtcagcattgctcatgggataggt
ctggaggacaaaacggggattttagatcataaagttttagatgtgccagaaaatacacct
gtgccttatcccatttaccagtttacatctgcatcggaaggtgtctcttcatatcacgtt
agtggagagaccgaaggaaagatcagcatctcttcagacggctggctattcctggagcat
cctctggaatggagccctgagaaaaaccaccatctacatattgaagcacgatcagcagat
ggtgaaactgttgatgggccttactctgttgttttgcaagttgtggatgtcaacaacaat
aaccctgtcttcagtgagagtcaattcagtggcagggttagagagcattcacctgcagga
ttcgtgttcatgcaggtgtttgcatcagacgcagatgatcccaacacagtaaacgctcaa
ctgaaattcagcattgtgaaccaaatccccaatcccgaaaacatgttttactttggcata
aacccagacaatggagagatctttataactgaacaaggagcagcgtctctgaaggccagg
cctgccgtaacatacagccgcggggaggtccgtggcagtcctgatgtcctgaggaagaag
tttgaggactactgtattccaaagaacaacataccactagagaacaaccccttttacaca
tgcgtcgagcgtgttgaaagaagacaagtggatcttctggtggatccagactatgcactg
attgttcgtgcagaagatttgggagatccaaacgctttgagcagcacgacacgagtcaac
atagttatcattcaaaacctctgggtcagccctgcaccaattgccattagagaaaattta
gacgaggaataccctatgtatcttactacagtgcgcagcaatgatcccaccgcactctac
aggctggtacagaaagaaagacttaatttcccctttaccatcaatcaagatggagagatc
tatgctacaggtcctctggacagagaagtgaaagatatgtacatattggtggccatggca
gaagatgaacatggcgttgagctggaaaaacccttggagattgttgtgcgggtggaggat
gtgaatgataaccctcctgtgtgtgatgaaggcgcagtgtttgaagtgcaggagaatgag
cccataggtaatacgatcggcgttctgcttgctcatgatagtgatgaagagaacacactg
aactcattactaacctactcactcctgagccagacacctacccacccaaatgagaacatg
ttcaccatcgaccaagtaaatggtgaaatcaaagtagccaatcaaaactttcaaagaaaa
gcggtgtctcagtatgagctcacctttacagtgtctgatcaagtttacactgcggaatgt
aaagtgatcatcaaggtcatcgacatcaataatgaaatccctgtcttcgagaaaaaagat
tatgggacctacagtgttcctgaactggctgaagcgggcaccactttgctcattatcaaa
gccacagatgcagatgacccaggaacaggaagctctagggtggagtatcatatctccgct
ggagacccacataacctcttagccattgaggttgatgaagccaccggagcaggcagagtt
tacatcgctcggcaactggattacgagctccagagcgtcttcaaccttcagattgatgcc
cgtaatcccgagcccttggtcgaaggattggaatatgatgaagatgccacaacagtcgtt
gtcattcagctagtggacgtggacgagcctccagaatttaaagaggacactcttgatgtc
aatgtcccagaaaacatcacgattggaaccgtcataatgaaagctgaagccaaggatcca
gagggaaagaccatcaagttaaggatggaaggagatgaacataattggttggagctggac
gctgactccggtgaactgaagactaaagctgctctagacagagagacggtggagcagatc
acactcacagtcatcgcttatgagacagagggagacaagcaggagggtgagatggaggtg
aatattcatctgctggatgtgaacgacaactaccccaaacttcagtggaaacagaacttc
atctgcattcaggacatgacccccttgacactcactgctgtagataaggatagcgacccc
tatggagagccttttaccttctcaattaaccgcaagtcaccaaactttgagatcaaacct
gtggatggaacctcagcgaagctgattctgaagaagaagccctcaagtgatcagaacgtc
agtgttcccattaacatcaaagacaatgctgggatgggtatcactcaaaagtttgatgtg
cgcatatgtaactgcactaaattgggctactgttacatggagccagaagctcacagctgg
aagctgggcatgggcagcaccatcggcatactggcaggaatattcggctttatcgttctg
tctatggtcattgttatgtaccgaatcaagaagaaggatcagacgagagcagcagatggt
ggagagactaaagcaatgctctag
DBGET
integrated database retrieval system