Pimephales promelas (fathead minnow): 120484388
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Entry
120484388 CDS
T08155
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120484388 (smarcad1a)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120484388 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
CUE
HBS1_N
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
120484388
NCBI-ProteinID:
XP_039535458
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MSFFNLDRFRFQRDNAVDSRGKSLDESSSDKENQRAHLRRTDGRCASGKTSIHTSEDEFA
DDKVVKMDKDSTSESKHQMNEDIEDRIIKLLEIFPQRSKKDLLEVVESTSTLEGAIAHCL
MVYGDEGKDSGRRKGKAGHSDGDDDDQPKKRRKIVGSDSESEEDEDSEDGESQEPSRERQ
EDLLKKMKKKLPDIEKEVLRDVLREHDWDYENALGSLLVFSSTDSSSPEDQRKQESKSSY
SREKNDKTLQNLNSSSSLSRWLTAAPSPMSKVSSASTPKTQISAVNKSTTKNASFKRKRG
NELPPDGSSASEDEDEIDSDVESISDDLDSEDEDRVSDSLQDKIIKFLQEASLDELALIS
GCSIKKAQKIISLRPFNNWKDVKEQFYKDNGLSIELVHGCKVVLKERQVVRDLMGRCEKI
AQKMTKDVTQVIEAGMGSIKQPKVLNSKLKLQPYQLIGLKWLILLHQHNLSGILADEMGL
GKTIQAISFLAHLYEKGIKGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRRYL
RQDILSGLIEFNIIVSTYNLTIGNDHDRSLFRKLRLKYAVFDEGHMLKNMNSLRYRHLMA
INAEHRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTSQISKMFSTRSSEEESSFHKERI
AQAKLIMKPFILRRVKSEVLKQLPPKVEKIEMCPMSDAQQKLYDKLFKKLKKTPNGDKRE
LCNVMMQLRKMANHPLLHRQYYTSDKLAAMSKAMLKEPSHYDADPALIQEDMEVMSDFEL
HNLCKQYCSISNFQLNKELILDSGKFALLTKMLAELKEKGDRVVLFSQFTMILDIVEMLL
KNLDHQFVRLDGSTPMAERIGLIDKYNTSPEIFVFLLSTRAGGQGINLASANTVILHDID
CNPFNDKQAEDRCHRMGQTRTVQVIKLISKDSIEASMLRVGQEKLKLEQDMTTDDGEDGA
MTEQMAELLKVSLGL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttttaacttagaccggttccgtttccaacgggacaatgcagtcgacagtcgc
ggtaaatcattggatgaatccagctcggataaggagaaccaacgagcccacctaagaagg
acagatggtcgatgtgcatcaggcaagacatcaatacacacatcggaggacgaatttgct
gatgacaaagttgtcaagatggacaaggattcaacatcagagtccaagcaccaaatgaac
gaggacatagaggacagaatcatcaaactattggagatcttccctcagaggagtaagaaa
gatctacttgaggtggttgagagcaccagcacactggagggagctatagcacattgctta
atggtttatggggatgaaggtaaagattcaggcagacggaaaggcaaagcgggacatagc
gatggtgatgatgatgatcagccaaagaagaggagaaaaattgtaggttcagattcagaa
tctgaggaggatgaagattctgaagatggggagagtcaagagccaagcagagagaggcag
gaggatttattgaaaaagatgaagaagaaattacctgatattgaaaaagaggtcctgagg
gatgtcctgagagagcatgactgggactatgaaaatgccttgggatcactgcttgtgttt
tcatcaacagattcaagttcaccagaagatcagagaaagcaagagtcaaaatcttcttac
tccagggaaaaaaatgacaagaccctacaaaacctcaacagctcgtctagtctgtcaaga
tggctgacagcagcaccgtctcccatgtcaaaagtctcgagtgcgtctactccaaaaaca
caaatatctgcagtcaacaaaagcacgaccaagaacgcatcctttaaacggaagagaggc
aatgaactgcctcctgatggcagcagtgcatctgaggatgaagatgagattgacagtgat
gttgagagtatctctgatgatctggactcggaggatgaggacagagtctctgacagtctt
caggacaagatcataaagtttctccaagaggcttccctagatgagcttgctctgatatct
ggctgctcaatcaaaaaagcccagaagatcatttcgctgaggcctttcaacaattggaag
gatgtgaaagagcaattctataaggataatgggctgtctatagagcttgtacatggctgc
aaggtggtgcttaaggagagacaagtcgttcgagaccttatgggaagatgtgagaagatt
gcacagaaaatgactaaagatgtcacccaggtcatagaagcgggcatgggctccatcaag
caacccaaagtcctgaacagcaaattaaaactacagccatatcagctgattggcttgaag
tggctgattcttctgcaccagcacaacctgagcggcatcctagcagatgaaatggggctg
ggtaaaaccattcaggccatctcgttcctggctcatttgtatgaaaaaggaatcaagggc
cctcatcttattaccgtaccctcgtccacattggataactgggttcgtgagctgggtctt
tggtgtcctagtcttaaagtgcttatttactatggttctgtggaagaccgcagatatttg
cgacaagacatcctcagtggtttgattgaattcaacatcatagtatccacctacaatctt
acaatagggaatgaccatgaccgcagtctgttccgcaagctgaggctgaagtatgcagtg
tttgatgaaggccacatgctaaagaatatgaactcgctgcgctaccgccacctcatggcc
atcaatgctgagcacagattgctgctgactggaacacctttgcaaaacaacctgctggag
ctaatgtccctgctgaacttcatcatgccatctatgttctctagcagcacctcacagatc
tccaaaatgttctctacgaggtcgtcagaagaggaaagcagttttcacaaggagagaatc
gcgcaggccaaactcatcatgaagccattcatcttgagacgagtcaagagtgaggtgttg
aaacagcttccaccaaaagtggagaaaattgaaatgtgtcccatgagtgatgcccagcag
aagctgtatgacaaacttttcaaaaaactcaagaagactccaaatggagacaagcgggag
ctttgtaatgtgatgatgcagctgagaaagatggctaatcatcctttgctgcaccgccag
tactacaccagtgacaaattggctgccatgagtaaagccatgcttaaggagccgtcacat
tatgatgccgaccctgcactgatccaggaggacatggaagtgatgtctgattttgagctg
cataatttatgcaagcagtactgctccattagcaattttcagctgaataaagagctcatc
ttggactctgggaagtttgcgctgttaaccaagatgctcgccgagctcaaagaaaagggt
gacagggttgtgcttttcagtcaattcaccatgatactggacattgtggaaatgctgctc
aagaaccttgatcatcagtttgttcgactagatggttctactcccatggcggagaggatt
ggtctcattgacaaatacaatacaagtcctgaaatatttgtgttccttctgtcgacccgg
gctggtggccagggaataaatctggcctcggctaacacagtcatactgcatgatattgat
tgcaatccatttaatgataaacaagcagaggaccgctgtcaccgaatggggcaaaccaga
actgtgcaggtgatcaagctcatcagcaaggactcaattgaggccagcatgctccgtgtt
ggacaggagaagctaaaattggagcaggacatgaccactgatgatggtgaggacggtgct
atgactgaacaaatggcagagctgctcaaagtttcacttggcctttga
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integrated database retrieval system
