Pimephales promelas (fathead minnow): 120484401
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Entry
120484401 CDS
T08155
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04020
Calcium signaling pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120484401
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120484401
04082 Neuroactive ligand signaling
120484401
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120484401
Ion channels [BR:
pprm04040
]
Ligand-gated channels
Glutamate (ionotropic)
120484401
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Med7
Motif
Other DBs
NCBI-GeneID:
120484401
NCBI-ProteinID:
XP_039535471
LinkDB
All DBs
Position
Unknown
AA seq
1962 aa
AA seq
DB search
MFVAMVTVPTLSLLLALVEWAGQTSSSPHLLLRPRERERDPVASMHFNIAVIHAGSTVQQ
GEAGAAAAAGRVPYPGFGRVHSSFGESVVTQWGSANVIWLQVNDSSPRTLLSQLCDLLAA
RPLQGLVYEDERPLPLASGPLAPMLEFVSAQTGLPIVAVGGGAGLGRVPQETGSIFLQFS
SSTALQLEVIFEVLEEYDWTAFSVVSTRHHGYQDFLSIVEGLTDGSFIGWEKKSVVMLNL
TDDPGGARARRLLKENEAQVRLLYCSQEEAEQVFQAAWAAGQASASHIWFAVGPALSELG
LTGLPNRLFAVRPQGWRDEPRRRIARGVSILTHGAVALRKDYGATGGPHFVTNCQTDGNR
TQRIRGRMKYFSNITLGGRDYSFNNEGYLANPFLDVISYTPGSGWEDVGWWENGVLRLRY
PAWSRYGPFLQPPDDAQHLRVVTLEERPFVIVELADPASGTCIRDSVPCRRPLNASALQE
GVAPMKQCCKGFCIDILKRLARIVGFTYDLYLVTNGKHGKKIDGVWNGMVGEVVYKRADM
AIGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLT
VVAVTVFIFEFFSPVGYNRSLQSGKKAGGSTFTIGKSIWLLWALVFNNSVPVENPKGTTS
KIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTEQYPPLKFGTVPN
GSTEKNIRSNYPDMHQYMIKYNQRSVEDAISHLKSGKLDALIYDAAVLNYMARKDEGCKV
MTIGSGKVFATTGYGIALIKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEV
MSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCMNKMGQSGKLDFLLAFSRG
MYSCCSFEDETAQGGVKVTVPGHHHTAMIPASSSHVVTSAVSNPAIAMVQQQQPQQPQPP
QSYKTPLPGSPPTIVHSGAALGPANTQLIGAPLPCTTFLPRPDRRLAVVDRWRLPKTASA
TTSMGVRGALAETGPLPQKVAPTWASSGGTGSGLDGYKRYYGPIDPEGLGTCLEQQTGSQ
TPKTVPRAHQQPPPTSVAFYQEKGMDHGMGKKVGVGTGGGGQGRGVKSLGTPRLPPKSQA
PAPLTPNPPLQHPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLGRRGGGREASRRPRPS
PPLPIPVPVTHSPSYTPPSPSPSLPYTSTSSSSSTTSSSTTSSATSSRSTSPSSTSTASS
RSTRDREGEEEDEEDLDELTEESSLLQGHNRTRDRERSILSPRSLTHGPPPPIPPRKPWG
TFGDREHKKDRERERGGSQLAQLQEWWAGWAERERDRERSSGAQGDTERKREKKRRKERD
KDKKKKKKKNKKRKKREERERERERERKRRKVKKKKKKAMKTKKKKKVSSSKRSEPEEGD
VEAERDGEGDGDREGEYSSFSNQYRSAFVDKGSLSAWEGERVRGRRDGVEDEGDDREDES
GGGRGRERRPKSSHSQHQTSSKRYPNLNKLPSSVKFWVSGGEAGGTEASGPSPPSSLHTL
LSSSKRRRSSGVEREAEGRVGERKPLLLHYERGRVNTREGLSLHEWDSEDEEEEGEEEET
ERERERERIEERVRRAGRGAVSESERDRIRAEESFSDEGSSGEFGRFERYWEGTGVGGAS
GIGGGGWFFGTYPAREKGGSVNSRDDSILGRAEGWGVAGDFWGSGPGIGWGSGGGSGGLG
SQWPPPPTSLPPPRRYWSVDKLQMKGEKRSRSGPKSKGQRSRDRMQDAASCTCTQYGHGR
PHTHHKHSSAQSHSQEDLLPHCHSFSGSSRPKALPNPDKSKSGSQSNLSSQQTQLSEHIP
QASPSSPQPLLPSLSVPSAPNSLPMPIPPPPSSTSMSPPPVLSPGAASGSSQAATASAKL
QYQRLRSVPQPRRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttgccatggtcacagtacccacgctgtctctgctattggccctggtagaatgg
gcgggtcagactagctcctcccctcatctcttgctccggccccgagagcgtgaacgggac
ccggtagcatcaatgcacttcaacatcgcagtgatccacgccggctcaaccgttcaacaa
ggggaagcaggggctgcagcagctgcgggtcgggtgccgtacccaggtttcggacgtgtt
cacagcagctttggtgagagcgtcgtcacccagtggggatccgcaaacgtaatctggctt
caggttaatgacagcagtcccaggacgttactctctcagctgtgtgacctgctggcagcc
agaccccttcagggactagtgtatgaagatgagagaccccttccgctggcctccggcccc
ctggcccccatgctggagttcgtttcagcccagaccggcctccccatcgttgctgtggga
gggggagcgggtctgggcagggtaccacaggagaccggctcaatcttcctacagttcagc
tcttccaccgcactccaattggaggtgatctttgaggtgctggaggagtacgattggacg
gccttctcagtggtgtccacacgtcaccatggctaccaggacttcctgtcaatagtggaa
ggtttgactgacgggtcattcatcggctgggagaagaagagcgtagtaatgttgaattta
accgatgacccaggaggagcgcgagcacgacggctcttgaaagagaacgaagcacaggtg
cggttgttgtactgctctcaggaggaagcagaacaggtgttccaagctgcttgggcagct
ggtcaggccagtgcctcccacatatggtttgcggtgggtccagctctgtccgagctgggc
ctgaccggactacccaatcgcctttttgcagtcagaccgcagggttggagggacgagccc
cgcagacgtatcgcccgtggggtgtccatccttacccacggagctgttgcgttgcgcaag
gactatggagccactggaggtccacactttgtcactaactgccagacggatggcaacaga
acacagaggattcgcggtagaatgaagtatttcagtaacatcactcttggtgggcgggac
tattcgttcaataacgagggctacctggccaatccctttctggatgtcatctcctacacg
cctgggagtggctgggaagacgtaggatggtgggagaacggggtgttacgtctgagatac
cctgcttggtctcgctatggccccttcctgcagccgcccgatgatgcccagcacctgagg
gttgtgaccctggaggagcgccccttcgttatcgtggagcttgcagaccctgcctctgga
acctgcattagggactctgtgccatgccggcggcctcttaatgccagtgcacttcaggaa
ggggtggcacctatgaaacagtgctgcaagggattctgcattgacattcttaagcgattg
gccagaattgttggcttcacctatgacctctacttggtgaccaatgggaaacatgggaaa
aagattgatggtgtttggaacgggatggtgggagaggttgtgtacaagcgggcagacatg
gcgatcggctccctcactattaacgaggaaaggtcagaggtcgtggacttctctgtgccg
tttgtagagacgggaatcagcgtcatggtctctcgcagtaatggaactgtctctccctct
gcttttcttgagccgtacagccctgctgtgtgggtgatgatgtttgttatgtgcctgacc
gtggtggcagtgacggttttcatctttgagttcttcagtccagtggggtacaaccgcagc
cttcagagtggcaagaaggccggaggttctacattcacaattgggaagtcaatctggctt
ctttgggcgctagtctttaataactccgttccagtggagaaccccaaaggaactactagc
aagatcatggttcttgtctgggctttctttgctgtcatcttcctggctagctacactgcc
aacctggctgccttcatgatccaagaggaatacattgacactgtgtctggcctcagcgat
aaaaagtttcagcaccccacagagcagtacccccctctgaagtttggaacggtccctaac
ggaagcacagagaaaaacatccgtagtaactatccagacatgcaccagtacatgatcaag
tacaaccagagaagtgtggaggacgccatctcccacctcaagtctggtaagctggatgcc
ttaatctatgatgcagccgtgttgaactacatggctcgtaaagatgaaggctgcaaagta
atgaccatcggctcagggaaagtattcgccacaactggttacggcatcgccctgatcaag
aactcccgctggaaacggccattggacctggccttactgcagctggtgggcgacgatgag
attgagatgctagagcgtctctggctctcagggatctgtcataatgataaaattgaagtg
atgagctccaaactagacatagacaacatggccggtgtgttctacatgctgctggtggcc
atgggcctaagtctgctggtcttcgcctgggaacacctggtttactggaggctgcggcac
tgcatgaacaagatgggccagtccggcaaactggacttcctgcttgccttcagcagggga
atgtatagctgctgcagttttgaagatgaaactgcacaaggtggggttaaagtcacagtt
cctggccaccatcacactgccatgattcccgcttcttcctcacatgtggtaacttcagct
gtatccaatccagccattgccatggtgcagcagcagcagccacaacagcctcaacctcct
cagtcttacaaaacacctcttcctggttcccctcccacaattgttcattctggagctgcc
ctgggtcctgcaaatactcaacttataggagctccgctcccatgcactactttcttaccc
cggccagatcgcagactggcggttgtggaccgctggagactacccaaaaccgctagtgcc
accacctccatgggtgtgagaggagccctagcagaaacagggcctttaccccaaaaggtg
gcacctacctgggcaagtagtggaggtacgggtagtggtctagatggatataagcgctac
tatggacctattgatccggagggacttgggacatgtctggaacaacagacaggttctcaa
actccaaaaactgtccccagagcccaccaacaacccccaccaactagtgtggctttctat
caggaaaagggcatggaccatggcatggggaagaaggtgggagtgggtactggtggaggg
ggtcagggtagaggggttaaatctctgggaactccaaggcttcctcctaaaagccaggcc
ccagccccactgacacctaaccccccgctgcagcacccctctccccctctcccttcatcc
ttctggaggaagcggcgaccaaaaaagcccaaagaacctggtggcccactgtatgaaaac
atcctgccactgggccggagaggtggaggcagggaagcgagtcgaagaccgagaccctct
cctcctctccccatccccgtgccagtcactcattccccatcctatactcctccatcacct
tctccctcactcccctacacctccacatcatcctcctcatccactaccagctcctcaacc
acatcttcagccacatcctcacgttccacctctccttcatccacttccacagcatcatct
cgcagcacccgagatagagagggtgaggaagaggacgaggaggatttggatgagctgact
gaagagtctagtcttctgcagggccacaacagaaccagggacagagaacggtctatcctt
tcccctagatctctcactcatggacctcctcctcctatacccccacgcaaaccgtggggc
acctttggagacagggagcacaagaaggacagagaaagagagaggggtggcagtcagcta
gcacagcttcaggaatggtgggcagggtgggcagagagagagagggacagagagaggagt
agtggagcccagggagacacagaaaggaaaagagagaagaaacgtaggaaagagagagac
aaagacaaaaagaagaagaagaagaaaaacaaaaaacggaaaaagagggaggagcgtgaa
agggaaagagaaagagaaaggaagcgtcgcaaggtgaaaaagaagaaaaagaaggcaatg
aaaacaaaaaagaagaagaaagtttcttccagtaagcggtcagagccagaggagggtgat
gttgaggcagagagagatggagagggggatggggatagagaaggagagtactcatcattt
tccaatcaataccgcagcgcatttgttgacaaaggcagtctttcagcttgggagggagag
agagtacgagggaggagagatggcgttgaggacgagggggacgatagagaggacgagagt
gggggaggtagaggaagggagagaagacctaaaagctcccattcacaacatcaaacatcc
agtaaacgctatcccaacctgaacaaactcccctcttcagtcaaattctgggtcagtgga
ggagaagcaggtggcactgaggcctccggaccctcccctccctcctccttacatacactc
ctctcctcatccaagagacggaggagtagtggggtagagagagaggcagaagggagagta
ggagagcgcaagccactgcttctccactatgaaagggggcgagttaacacaagagaagga
ctgtccctccatgagtgggactctgaggatgaggaagaggaaggggaagaagaagagaca
gaaagagaacgagagagggagagaatagaggagagagtgcggcgtgcagggagaggagca
gtgtctgagtcagagagggacagaataagagcagaggaaagcttttctgacgaggggtcc
tcaggagagtttggccgttttgagaggtactgggaaggaactggtgtaggtggagccagt
ggaattgggggtgggggctggttttttggaacataccctgctcgagagaaaggtggaagt
gtcaacagtagagatgactccattttgggtcgagctgaagggtggggtgtggcaggtgat
ttctggggttcaggtccagggattggatggggttctgggggaggcagtggagggctgggt
tcacagtggccaccccctcccacctcccttccaccaccgcgacgctattggtcagtggac
aaactacagatgaagggtgagaagcgtagccgcagtgggccaaagagcaaaggtcagagg
tccagggatagaatgcaagatgcagcatcatgtacgtgtacacagtatggccacggtagg
ccccacacacaccacaaacacagcagtgctcagtcccacagtcaagaagatctgcttcct
cactgccacagcttcagtggaagctctcggcccaaagcactccctaatcctgataaatcc
aaatccggaagccagtccaacctaagctcccagcaaacccagctctcagaacacataccc
caggcatcaccatcctcacctcagccactcctgccctcattatctgttccttctgctccc
aactccctacccatgcccattcctccacctccatcctctacatccatgtctcctccacct
gtgctttcccctggggctgcttccggctcctcccaggcagccaccgccagtgctaagctt
caataccagagacttcggtctgtgccccagccaagacgattctactccccacacctgccg
ctcaaagccaagagcttatgctcacgccgtggttctgcccatttctccagcctagagagt
gaagtatga
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