Pimephales promelas (fathead minnow): 120484440
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Entry
120484440 CDS
T08155
Symbol
pou2f2a
Name
(RefSeq) POU domain, class 2, transcription factor 2 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120484440 (pou2f2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120484440 (pou2f2a)
03021 Transcription machinery [BR:
pprm03021
]
120484440 (pou2f2a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120484440 (pou2f2a)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
120484440 (pou2f2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
TAP42
Motif
Other DBs
NCBI-GeneID:
120484440
NCBI-ProteinID:
XP_039535531
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MFVPLPVPFVLPRTASDLHAWRLKSPLALRSHSDIRMSKPVEVENPAADSPMESTDSERN
GSDSNNQVQLMKINPFSLSPTLSSGNKAKVEDCGEMSPAAPAQTALSHTQLMLTGGQLAG
LTALLPAQQQLLLQQAQLLAAAVQQSHAAHAANQQQAQKQANQQAAQPQSHGQSQSTQEQ
TASPVPPPPHQLPLSQPIQLTAQDIQQLLQLQQLVLVPGHTLPSQFLLPQTQQGQQGLLS
TPNLIPLPQQNQGSLLAGPPRLSLQAQREKVAESSANTVTQVTSHPEEPSDLEELEQFAR
TFKQRRIKLGFTQGDVGMAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDA
ETMSMDCTLPSPSALSSPSLGFEGLPGRRRKKRTSIETNVRIALERSFITNQKPTSEEIL
LISEKLSMEKEVIRVWFCNRRQKEKRINPSSATPPLPSQPQPTSHKPPCYSPHMMSSQGL
SQTVSSLSTAVTTMSSVCPLTSSGPTLSSASSPVTPPSRGDASPAPPTHSTLSLNTGSWH
KKNGDVSNYITDFAASLRNTMRSINTGMNQALLGSNPLATIQALAASGGQLPISSLEGSS
KVLIGGSGAQGAGLTSSLFLNHSSLLPMATGPGMGLGGSAVGKTSFPVAGGMSPSPCSSP
ISSCSSGELLHSPHSIGGAKIE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcctttgccggtgccgtttgtcttgccgagaactgcctctgatctccacgcc
tggcgcctgaagtccccgctggctctccgctctcactccgatatcagaatgtcaaagcca
gtagaggttgagaatccagcggcagactctccgatggagagcacagattcagaaagaaat
ggctcagattcaaataatcaggttcagctgatgaaaatcaaccctttctccctttcaccc
acactgagtagcggcaacaaagctaaggtggaggattgtggtgagatgtctcccgctgca
cccgctcagacggccctttcccacacacagctgatgctaacgggtggccagctcgcaggg
ttgactgcacttttgcctgcacagcaacagctgctcttacagcaggcgcagctcctcgct
gcagctgtgcagcagtcacatgcggcccacgcagccaatcaacagcaggcccagaagcag
gccaatcagcaggcagctcagccgcagtcacatggccaatcgcagagcacacaagaacaa
accgcctcccccgtcccgcctcctcctcaccagctccctctttctcagccaatccagctc
actgcccaggacattcagcagttgttacagctgcagcagttagtcctcgttccaggacac
actctgccttcacagtttcttttaccacaaacgcagcaagggcagcaagggctgctatca
acaccaaatctaattccactacctcagcaaaaccaaggaagcctgctggccggtccacca
agacttagtcttcaagcacagagagaaaaggttgcagagagcagcgcgaacacagtgacg
caagtgacctctcaccctgaggagcccagtgacctggaggaactggagcaatttgcccgc
actttcaagcagagaaggatcaaattgggcttcacacagggtgatgtgggaatggccatg
gggaaactctatgggaatgatttcagtcagaccaccatctctcgatttgaggctctcaat
ctcagctttaagaacatgtgcaaactcaaacctctgctggagaagtggctgaatgacgca
gaaacaatgtcaatggactgcaccttgccgagtcccagtgctctctcctctccctcgctg
gggtttgagggcctgcctggccgccgcaggaagaaacgcaccagcattgagaccaacgtc
cgcatcgctctggaacgcagcttcatcacgaaccagaagcctacctcagaggagatcctg
ctcatctcagagaagctcagcatggagaaggaggtgatccgcgtctggttctgcaaccgc
cgacagaaagagaaacgtattaacccctccagtgccacccctcccttgcccagccaaccc
cagcccacctcgcacaaacccccctgctacagcccgcacatgatgtccagtcagggacta
tcccagacagtgagcagtcttagcacagcagtgaccaccatgtcatcagtttgccctttg
acctcaagcggacccaccttaagctccgcctcttcacctgtaaccccgccgtcacgtggg
gatgccagccccgcccctccaactcacagtacgctaagtttgaacacaggttcatggcat
aaaaagaatggtgacgtttctaactacatcactgactttgctgcaagtttgaggaatacg
atgaggagcattaacacaggaatgaaccaagctcttcttggcagcaacccacttgctact
attcaagccctagcagccagtggtggtcagctgcccatttccagtcttgaaggcagcagc
aaggtgttaattggtggttctggggcccaaggagcaggtcttacctcttccctctttctc
aaccactcctctttgttgcccatggcaacaggccccggcatgggattgggcggttcagct
gttggcaaaacctcatttcctgtcgcaggcggcatgagtccctccccttgctcgagcccc
atctcttcctgctcttccggtgaattgctgcacagcccgcactcgatcggaggggctaaa
attgagtga
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integrated database retrieval system
