Pimephales promelas (fathead minnow): 120484517
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Entry
120484517 CDS
T08155
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120484517 (sntb1)
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Motif
Pfam:
PH_17
PDZ
PH
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
120484517
NCBI-ProteinID:
XP_039535665
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MAVCGNRVQKSACLEVLVRERWHAVLASLSDESLTLSCEDPATDTSINLNGITTNGSYDQ
PDPTNSPKAAVWTPFTDSQVPEAIANRKRCVKVIKQEVGGLGISIKGGKENKMPILISKI
FKGLAADQTQALYVGDAILSVNGINLRDATHDEAVQVLKKAGREVMLEVKYMREATPYVK
KGSPVSEIGWETPPPESPRLGSPHFDIPSPPSLSLQGDRRYIPLKMCYITRSMTVPDPEN
RQMELHSSDAKHTIVMRHTDTASAQTWFTLMQTAISNLTSKVISELREHAGRHSIAGSRE
IRYLGWLAEKTESERQRWKPVLVMLTEKDLLLFDSMPRMREHWLSPTHTYPLLATRLVHS
GPDKGSPQPGGELCFATRTGTRLGIEAHLFRAETSKNLSLWTRHIVTGCHASAEMIKEVT
TSEYGSYFLLLSHVL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttgtggtaacagagtgcagaaaagtgcatgtttggaagtgctagtacgggag
cgatggcacgcggtgctggcgagtttaagcgacgagtcactgacgctcagctgcgaggat
cccgcgacagacaccagcattaacctcaacggcatcaccaccaacggctcctacgaccag
ccggaccccacgaacagtcccaaagccgcagtatggactcctttcacggactcacaagtt
cccgaagcgattgcgaaccgtaaaagatgtgtcaaagttatcaagcaggaggtcggtgga
ttagggataagcatcaaaggcgggaaggagaacaagatgcctattctaattagtaagata
ttcaagggtctggctgcggatcagactcaagcgctctatgtgggggacgcgatactgtcc
gtgaacgggatcaatctgcgggacgccacgcacgacgaggcggtacaggtgctgaagaaa
gcaggcagagaagttatgctggaagtgaaatacatgcgggaagcaacgccatatgtgaaa
aaaggctcaccggtgtctgagattggctgggagaccccgcctcctgagtcccctcgtctc
ggcagtcctcacttcgatattcctagccccccctcactgtccttacagggcgaccgaaga
tacatccccctcaaaatgtgctacatcacccgcagtatgactgtccctgacccagaaaac
aggcagatggagcttcactcctctgatgctaagcacacaatagtcatgagacatacagac
acagcctctgcccagacctggttcactctcatgcaaactgccatctcaaacctcaccagc
aaagtcatcagcgaactccgagaacacgcaggccgccacagcatcgccgggagtcgagag
atccgatacctcggctggctagcggaaaagacggaaagtgaaagacagcgctggaagccg
gtgctcgttatgttgacggagaaagacctgctgctgtttgatagcatgccacgaatgaga
gaacactggctcagcccgacacacacctaccctctgctcgctacacggctggtgcattct
ggtccagataagggttcaccgcagcctggtggagagttgtgctttgctacacgaacggga
accagattgggtatcgaagcccacctcttcagagcagagacgagcaagaacctatcactc
tggaccagacacatagttactggctgccacgcatctgccgagatgatcaaagaagtcact
accagtgagtatggatcctacttcttgcttctttctcacgtcttatga
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