Pimephales promelas (fathead minnow): 120484531
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Entry
120484531 CDS
T08155
Symbol
atxn1b
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-1
KO
K23616
ataxin 1/1L
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120484531 (atxn1b)
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Ortholog
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GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
120484531
NCBI-ProteinID:
XP_039535687
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MKSNQERCNECLPPKKREILALEEKQVLVSAAVSESQSGENLAWLASVATMASMAHIPNN
AGPSLSNSADPDSPPPSNKALTVVTEYPTATSSAGFSFSSNSSTYRGVFSGPTVLTANPT
VLSSSLPQTIGSVQYTQLPPXLQLIGPYTSYISSQIVPSTSSPTQTRRTPQEVLATTAVI
SQASSLDSQSHHAISSISNVSHGQCIQVESAPLGLTVSSPSVQLPLQIHPHSTVLAPHAL
ALTPSQVVLHYTDGFIAKQLDSHPREVQNGALGEVTVVKPGTTMAKGISSQPEGDQSHKQ
NHNLGLQTQAQVLLPADYSSHDRAGLQTSLMLVSSSHLAANSNSEFQSVMVKDHSSLHLA
ERGGICLGKPMSRVSALTSSDSQVSPASTISQHTLLQAPHNTPQQELSTSLYPATQLPII
GYITSASGGPQQAVTGYQSNLPQHVVISGNPSLLIPVSATNINPSTAEPEVTHCSVIPSV
ANASTTLPQTFINTSPPAAAASVLANGKDITGSDGSHAPCAMRSPSQIQLPVLSANVVGS
PVPVTPPASTSPQSSPSSPSAGLPPFFMKGSIIQLADGELKRVEDLRTEDFVQSAEVSGE
LKIDSSTVERIECSRTPNAVIIQFSVGENKAQVCVEVLVEYPFFVFGQGWSSCCPDRTTQ
LLALSCAKLSVGDVCISLTLKSLKNSIQKKNNCSASVMKHNNPLKSAKNNGSIEERPTQM
EDLKKGHKITSRVENSVEGTLVETSNQRNVLTFSENGGINPQTLVNQNNQAEKTHTSSAE
RAVSRKRRWSAPERGEMWRSQEDPQILPKFSFLPHQLKVSIEGRSSTGC
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctaaccaggagcgctgtaatgagtgtcttccgccgaagaagcgggagatttta
gctctggaagagaagcaggtgctggtgtcagctgctgttagtgagagccagagtggagag
aatttggcttggctagccagcgtcgctaccatggctagcatggcccacatccccaacaat
gcaggcccatcactgagcaacagtgcagatcctgacagccccccaccatcaaataaggct
ctcactgtggtgacagaatatcctacagctacttcatctgctggcttttcattctcttcc
aatagctccacatacagaggagtcttctctgggcctaccgtgctaacagccaatcctaca
gttctctcctcaagccttccccaaactataggctccgtccaatatacacaacttccccca
natctccagctcatagggccctatacaagttatatctcttcacagattgtaccatccaca
tccagtccaacacagacacggaggacaccacaagaggtcttggccacaacagctgtcatc
tctcaagcatccagccttgattcacagagtcatcatgcaatttcttctatatcaaatgtt
tcccatggtcaatgcattcaggtagagagtgctcctttgggtttgacagtttcctcccct
tctgtccaactgccccttcaaatccatccacactcaactgtccttgcccctcatgccctg
gctctcaccccctctcaagtggttctacactacactgatggcttcattgcgaagcagctg
gactcccatcccagagaggtgcaaaatggtgcactgggagaggttacagttgtcaagccc
ggtactactatggccaaagggatctctagccaaccagaaggtgaccagagtcacaagcaa
aatcataacctgggcctccagacccaagctcaggttttgctcccagcagactatagctct
catgacagagcaggactacagacatcgctgatgttggtatccagtagccaccttgcagca
aacagcaactctgagttccaaagtgtcatggtcaaggaccactcatcgttgcaccttgct
gagagaggaggtatctgcctaggtaagccaatgtccagagtgtccgctcttacttcctca
gacagccaagtttcaccggcctccaccatctcgcagcacacactcctgcaggctcctcac
aacaccccccagcaggagctctccaccagcctttatcctgccacacagctcccaattatt
ggctacatcactagtgcttctggtggaccccagcaagcagtaactggttatcaaagcaac
ctgccacagcacgtggtgatctcaggcaacccctccttgctcattccggttagtgccact
aacatcaatccatctactgctgagccagaggtcacccactgttctgtcatccctagtgta
gccaatgcatcaacaactctgcctcagacctttattaatacatccccacctgcagctgca
gcttcagtcctagccaatggtaaagacatcacagggtctgatggaagtcatgccccctgt
gccatgagaagtccaagccaaatacagctgcctgttctttcagccaatgtagtgggatct
ccagtccctgtaacacctccagcatctacaagccctcaaagctcaccatcatcaccatca
gcgggcctaccaccattcttcatgaagggctctattatccagttggcagacggtgagctg
aaacgcgtggaggatttgcgaacagaggactttgttcaaagtgcagaggtgagtggagaa
ctgaagattgactccagcactgtagagcgcatagagtgcagccgaacacccaatgctgtc
atcatacaattctcggtgggagagaacaaagcccaggtgtgtgtagaagtcctggtggaa
taccccttctttgtgtttggtcaaggttggtcatcctgctgccctgatcgcaccacccag
ttgctagctctatcctgtgccaagctctctgtgggtgatgtttgtatctctctcactctt
aaaagcctaaaaaatagcattcaaaagaaaaataattgttcagcgtctgtgatgaaacac
aacaaccctttgaaatcagccaaaaacaatgggtccattgaggaaagaccaacccaaatg
gaggatcttaagaaaggacacaaaattacatcaagagtggagaatagtgtcgaaggaaca
ctggttgagacttccaaccaaagaaatgtgttgaccttctcagagaacgggggcataaat
cctcagacactggtcaaccaaaacaaccaggcagaaaaaacacacacatctagtgcagag
agagcagttagccgcaagaggagatggtctgccccagagagaggagaaatgtggaggtcg
caagaggaccctcagattttacccaaattttccttcctcccacatcagctgaaggtcagc
attgagggtcgctccagcacgggttgctga
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